FFCP PHASE1:Hg19::chr11:914889..914901,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=66005 | |EntrezGene=66005 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28474 | |HGNC=28474 | ||
|TSSclassifier=strong | |||
|UniProt=E9PIP0 | |UniProt=E9PIP0 | ||
|association_with_transcript=-69bp_to_ENST00000533059_5end | |association_with_transcript=-69bp_to_ENST00000533059_5end | ||
|cluster_id=chr11:914889..914901,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_13_at_CHID1_5end | |description=CAGE_peak_13_at_CHID1_5end | ||
|id=chr11:914889..914901,- | |id=chr11:914889..914901,- | ||
|ontology_enrichment_celltype=CL:0000181!2.90e-24!12;CL:0000417!2.90e-24!12;CL:0000668!2.90e-24!12;CL:0000414!2.90e-24!12;CL:0000412!2.90e-24!12;CL:0000182!2.90e-24!12;CL:0000990!9.87e-11!8;CL:0000451!8.43e-09!10 | |ontology_enrichment_celltype=CL:0000181!2.90e-24!12;CL:0000417!2.90e-24!12;CL:0000668!2.90e-24!12;CL:0000414!2.90e-24!12;CL:0000412!2.90e-24!12;CL:0000182!2.90e-24!12;CL:0000990!9.87e-11!8;CL:0000451!8.43e-09!10 | ||
|ontology_enrichment_celltype_v019=CL:0000182;4.29e-38;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.09e-38,12;CL:0000223,2.52e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.06e-11;11!UBERON:0009497;1.16e-09;13 | |||
|ontology_enrichment_disease=DOID:8552!3.85e-07!1 | |ontology_enrichment_disease=DOID:8552!3.85e-07!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!7.76e-22!26;UBERON:0002107!1.40e-19!19;UBERON:0006925!1.40e-19!19;UBERON:0008836!1.40e-19!19;UBERON:0008835!9.56e-17!22;UBERON:0003894!9.56e-17!22;UBERON:0009854!5.77e-16!23;UBERON:0005172!6.59e-16!55;UBERON:0005173!6.59e-16!55;UBERON:0007499!1.37e-14!25;UBERON:0009497!1.37e-14!25;UBERON:0000015!1.37e-14!25;UBERON:0002423!1.37e-14!25;UBERON:0006235!1.37e-14!25;UBERON:0004161!1.37e-14!25;UBERON:0002417!4.38e-14!61;UBERON:0000916!4.38e-14!61;UBERON:0009856!5.55e-14!26;UBERON:0002365!1.57e-11!31;UBERON:0002330!1.57e-11!31;UBERON:0002368!4.51e-10!35;UBERON:0002106!4.08e-09!3;UBERON:0004854!4.08e-09!3;UBERON:0009034!4.08e-09!3;UBERON:0002095!4.08e-09!3;UBERON:0004782!4.08e-09!3;UBERON:0003281!4.08e-09!3;UBERON:0009664!4.08e-09!3;UBERON:0002296!4.08e-09!3;UBERON:0005602!4.08e-09!3;UBERON:0001179!4.08e-09!3;UBERON:0006293!4.08e-09!3;UBERON:0005177!3.87e-08!107;UBERON:0000949!1.45e-07!45;UBERON:0009569!1.46e-07!113;UBERON:0002405!2.25e-07!115;UBERON:0000029!2.37e-07!1;UBERON:0002146!3.02e-07!1;UBERON:0005623!3.02e-07!1;UBERON:0001301!3.41e-07!1;UBERON:0007023!3.76e-07!115;UBERON:0007190!6.20e-07!1;UBERON:0002363!6.97e-07!1;UBERON:0007647!6.97e-07!1;UBERON:0010115!6.97e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.99e-37;19!UBERON:0006925;1.99e-37;19!UBERON:0002423;1.39e-28;25!UBERON:0002365;6.59e-24;31!UBERON:0002330;6.59e-24;31!UBERON:0002368;1.66e-19;33!UBERON:0000949;1.80e-15;43!UBERON:0005172;3.54e-11;52!UBERON:0005173;3.54e-11;52!UBERON:0002417;1.00e-08;58!UBERON:0000916;1.00e-08;58!UBERON:0002530;5.64e-08;57!UBERON:0001007;7.07e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.91e-37,19;UBERON:0006925,1.91e-37,19;UBERON:0008836,1.91e-37,19;UBERON:0008835,2.03e-32,22;UBERON:0003894,2.03e-32,22;UBERON:0009854,4.92e-31,23;UBERON:0007499,1.35e-28,25;UBERON:0009497,1.35e-28,25;UBERON:0000015,1.35e-28,25;UBERON:0002423,1.35e-28,25;UBERON:0006235,1.35e-28,25;UBERON:0004161,1.35e-28,25;UBERON:0009856,1.62e-27,26;UBERON:0002365,3.66e-23,31;UBERON:0002330,3.66e-23,31;UBERON:0002368,1.43e-20,35;UBERON:0000949,4.25e-16,45;UBERON:0003929,1.76e-13,54;UBERON:0005172,1.76e-13,54;UBERON:0005173,1.76e-13,54;UBERON:0002530,2.28e-12,59;UBERON:0002417,3.62e-12,60;UBERON:0000916,3.62e-12,60;UBERON:0005911,5.51e-09,82;UBERON:0001041,1.75e-08,87;UBERON:0005177,2.43e-07,101 | |||
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|short_description=p13@CHID1 | |short_description=p13@CHID1 | ||
}} | }} |
Latest revision as of 01:18, 25 September 2015
Short description: | p13@CHID1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_CHID1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -69bp_to_ENST00000533059_5end |
EntrezGene: | CHID1 |
HGNC: | 28474 |
UniProt: | E9PIP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.09e-38 | 12 |
endodermal cell | 2.52e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 1.91e-37 | 19 |
digestive gland | 1.91e-37 | 19 |
liver bud | 1.91e-37 | 19 |
hepatic diverticulum | 2.03e-32 | 22 |
liver primordium | 2.03e-32 | 22 |
digestive tract diverticulum | 4.92e-31 | 23 |
epithelial sac | 1.35e-28 | 25 |
epithelium of foregut-midgut junction | 1.35e-28 | 25 |
anatomical boundary | 1.35e-28 | 25 |
hepatobiliary system | 1.35e-28 | 25 |
foregut-midgut junction | 1.35e-28 | 25 |
septum transversum | 1.35e-28 | 25 |
sac | 1.62e-27 | 26 |
exocrine gland | 3.66e-23 | 31 |
exocrine system | 3.66e-23 | 31 |
endocrine gland | 1.43e-20 | 35 |
endocrine system | 4.25e-16 | 45 |
gut epithelium | 1.76e-13 | 54 |
abdomen element | 1.76e-13 | 54 |
abdominal segment element | 1.76e-13 | 54 |
gland | 2.28e-12 | 59 |
abdominal segment of trunk | 3.62e-12 | 60 |
abdomen | 3.62e-12 | 60 |
endo-epithelium | 5.51e-09 | 82 |
foregut | 1.75e-08 | 87 |
trunk region element | 2.43e-07 | 101 |