FFCP PHASE1:Hg19::chr11:93517535..93517544,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:93517535..93517544,+ to FFCP PHASE1:Hg19::chr11:93517535..93517544,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9440 | |EntrezGene=9440 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2375 | |HGNC=2375 | ||
|TSSclassifier=strong | |||
|UniProt=E9PKQ4 | |UniProt=E9PKQ4 | ||
|association_with_transcript=7bp_to_ENST00000533359_5end | |||
|cluster_id=chr11:93517535..93517544,+ | |||
|description=CAGE_peak_5_at_MED17_5end | |||
|id=chr11:93517535..93517544,+ | |||
|ontology_enrichment_celltype=CL:0000133!6.91e-12!59;CL:0002319!8.38e-11!25;CL:0000221!6.10e-10!71;CL:0000333!1.07e-09!41;CL:0000095!4.38e-07!17;CL:0000123!4.38e-07!17 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.35e-22;25!CL:0002605;8.37e-20;3!CL:0000540;7.54e-18;6!CL:0000404;7.54e-18;6!CL:0002321;4.54e-15;15!CL:0000333;1.98e-12;5!CL:0002322;4.12e-12;5!CL:0000128;8.58e-09;7!CL:0000126;8.58e-09;7!CL:0000127;8.58e-09;7!CL:0000095;2.33e-08;17!CL:0002032;3.54e-08;1!CL:0000557;3.54e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,3.96e-24,59;CL:0002319,1.48e-22,25;CL:0000047,1.52e-20,8;CL:0002605,6.50e-20,3;CL:0000221,2.53e-19,72;CL:0000540,6.11e-18,6;CL:0000031,6.11e-18,6;CL:0000404,6.11e-18,6;CL:0000333,2.79e-16,41;CL:0002322,6.54e-12,5;CL:0000128,7.72e-09,7;CL:0000126,7.72e-09,7;CL:0000127,7.72e-09,7;CL:0002453,7.72e-09,7;CL:0000095,1.99e-08,17;CL:0000123,1.99e-08,17;CL:0002321,3.37e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000031;7.54e-18;6!CL:0000133;8.28e-14;59!CL:0000221;1.42e-09;72 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;1.93e-10;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.54e-10,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.98e-12;5!UBERON:0002410;1.98e-12;5!UBERON:0000010;4.13e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.51e-12,5;UBERON:0002410,1.51e-12,5;UBERON:0001016,3.41e-11,89;UBERON:0001017,1.49e-07,81;UBERON:0004121,2.02e-07,171;UBERON:0000924,2.02e-07,171;UBERON:0006601,2.02e-07,171;UBERON:0000010,3.57e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0.672325146451775,1.20538905604795,0,0,0.246242116153576,0,0.313454721478088,1.14494394852423,1.23186982565596,1.75759695432724,0.0764134057479513,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0.387336002901508,0.142169232487422,0.880801318004542,0,0,0.217010870715852,0,0,0,0.145398238779565,0.377875943688809,0,0.232429036905685,0,0,0,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,0.290209238628584,0,0.622822248995575,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0.263384084775077,0.393419540227666,0.393010762749165,0.411202997999018,0,0.32592226663359,0,0,0,0,0.221533894583621,0.270803863765016,0,0.130059347559878,0.164437904603676,0,0,0,0.267540828089713,0,0,0.383220493601921,0,0.253019692019503,0,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0,0,0.403213486449465,0,0.289648807765598,0,0,0.255725123687061,0,0,0.144846518960824,0.795285947051099,0,0.378139268656271,0.221729397462564,0.614843499851882,0.0654895377488563,0,0,0,0,0.132957960518865,0.476981248610684,0.571994910780128,0.74291500265913,0,0,0,0.56530794192401,0,0.275118041940067,0.208994966536811,0.775250277507987,0,0.33472061276467,0.805658634218294,0,0.488124115096339,0.367663080345869,0.81014194788176,0.357198913136319,0.22452937262617,0.225222960966644,0,0,0.366403487860815,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0.49333509683432,0.311211035399766,0.404132016209064,0.163461903113459,0,0,0.234321431833797,0,0.570471821544449,0,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0.226864366320042,0.358779271377724,0.213557388818567,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0.168776332241266,0,0.504867548488229,0,0,0,0.10075209822764,0,0.193260853163297,0,0,0.243947412259191,1.06023814657188,1.04574548582567,1.45125477021519,0.756962552626885,0.36497735907583,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0.220587945464788,0,0,0.134831308160164,0,0,0,2.80483547606892,0,0,0,0,0,0.441463099414651,0.245976877086227,0,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,0,0,1.04337364477569,0,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0.176096868026452,0,0,0,0.063497894292169,0.381988425558278,0,0,0.308482478109971,0.300343057843917,0,0.112131084345361,0,0.22001485746285,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0.112085143993527,0.394061520403854,0.431255149719035,0.513372145118994,1.52456774533478,0,2.31986643833309,1.84267891867784,2.55175500661265,0,0,0,0.36807447515742,0,0.271265023699736,0,0,0,0.117141414992713,0,0,1.03473071292505,0,0,0.0868836144680828,0,0,0.206768026122887,0,0.320182673410333,0.606255142892519,0,0,0,0.306923946576125,0,0,0,0,0,0.154209693802656,0.532685175939381,0,0,0.232420756919918,0.120859449591622,0,0.0920809889358963,0.229628896329213,0,0,0.451199612907412,0.385076685522074,0.784349769176855,0,0.316654886678627,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0.261435451024901,0,0.328014645699706,0.650756789328606,0,0.27470839445503,0.330037999682352,0,0.650060246036521,0,0.193341436584244,0.154048617114644,0,0.137836572484531,0.107420244868274,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0.286249773483982,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0,0,0.487426979262569,1.05650146756755,0.136499911407986,0.141405431953713,0,0,0,0,0,0.655894752046633,0.405820753925408,0.30982349809975,0,0.143411352204052,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0.432807638929335,0.284567373393656,0.159426272728822,0,0,0,0.649243880549111,0,0,0.156679895773023,0,0.169291777801603,0.321176150207399,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0.121360521749513,0.111443384277478,0.284136146806413,0,0,0,0,0,0.556543525114529,0.329607748453519,0.422250816255987,0,0,0.251932747854276,0.920418142519393,0.123084805461069,0,0.449341755736634,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0.254253650292766,0,0,0,0.347249989866585,1.77148277162768,0.241192877250816,0,0.110579259931225,0,0,0.21787692703798,0.278847488557207,0.153900517007594,0,0,0.179515288819544,0.217294743844016,0,0.183195186803725,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0.326465616318295,0.141353071433941,0.649165919226273,0,0.0884575645033392,0,0.593042257361244,0.370691816839509,0.522109747527277,0.404406797884062,0.802577647298789,0,0,0.19566461893209,0.242780379534093,0,0,0.91821828489147,0.063186579628488,2.1045278718029,0.622129148383483,0,0,0,0,0.284609546029793,0.416024019039416,0,0.0979923974143777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| ||
|short_description=p5@MED17 | |||
}} | }} |
Latest revision as of 03:05, 25 September 2015
Short description: | p5@MED17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MED17_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_ENST00000533359_5end |
EntrezGene: | MED17 |
HGNC: | 2375 |
UniProt: | E9PKQ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 3.96e-24 | 59 |
neural cell | 1.48e-22 | 25 |
neuronal stem cell | 1.52e-20 | 8 |
astrocyte of the cerebral cortex | 6.50e-20 | 3 |
ectodermal cell | 2.53e-19 | 72 |
neuron | 6.11e-18 | 6 |
neuroblast | 6.11e-18 | 6 |
electrically signaling cell | 6.11e-18 | 6 |
migratory neural crest cell | 2.79e-16 | 41 |
embryonic stem cell | 6.54e-12 | 5 |
oligodendrocyte | 7.72e-09 | 7 |
macroglial cell | 7.72e-09 | 7 |
astrocyte | 7.72e-09 | 7 |
oligodendrocyte precursor cell | 7.72e-09 | 7 |
neuron associated cell | 1.99e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 1.99e-08 | 17 |
embryonic cell | 3.37e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.51e-12 | 5 |
autonomic nervous system | 1.51e-12 | 5 |
nervous system | 3.41e-11 | 89 |
central nervous system | 1.49e-07 | 81 |
ectoderm-derived structure | 2.02e-07 | 171 |
ectoderm | 2.02e-07 | 171 |
presumptive ectoderm | 2.02e-07 | 171 |
peripheral nervous system | 3.57e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.54e-10 | 6 |