FFCP PHASE1:Hg19::chr7:116140237..116140253,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=858 | |EntrezGene=858 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1528 | |HGNC=1528 | ||
|TSSclassifier=strong | |||
|UniProt=P51636 | |UniProt=P51636 | ||
|association_with_transcript=139bp_to_ENST00000495841,NM_001206748_5end | |association_with_transcript=139bp_to_ENST00000495841,NM_001206748_5end | ||
|cluster_id=chr7:116140237..116140253,+ | |||
|description=CAGE_peak_6_at_CAV2_5end | |description=CAGE_peak_6_at_CAV2_5end | ||
|id=chr7:116140237..116140253,+ | |id=chr7:116140237..116140253,+ | ||
|ontology_enrichment_celltype=CL:0002139!1.87e-14!24;CL:0000076!4.11e-12!62;CL:0000213!9.08e-12!57;CL:0000215!9.08e-12!57;CL:0000071!2.19e-10!18;CL:0002546!2.19e-10!18;CL:0000066!4.79e-10!254;CL:0000222!1.53e-08!119;CL:0000115!3.90e-08!35 | |ontology_enrichment_celltype=CL:0002139!1.87e-14!24;CL:0000076!4.11e-12!62;CL:0000213!9.08e-12!57;CL:0000215!9.08e-12!57;CL:0000071!2.19e-10!18;CL:0002546!2.19e-10!18;CL:0000066!4.79e-10!254;CL:0000222!1.53e-08!119;CL:0000115!3.90e-08!35 | ||
|ontology_enrichment_celltype_v019=CL:0002139;6.26e-30;24!CL:0000071;1.95e-22;18!CL:0000115;2.93e-18;36!CL:0002544;2.50e-13;6!CL:1000413;3.45e-12;9!CL:0000136;1.14e-10;13!CL:0002078;2.75e-10;45!CL:0000213;1.18e-09;58!CL:0000215;1.18e-09;58!CL:0002138;4.90e-09;6!CL:0002543;4.33e-08;6!CL:0000076;2.37e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.07e-30,24;CL:0000071,2.22e-22,18;CL:0002546,2.22e-22,18;CL:0000115,3.99e-21,36;CL:0002078,5.26e-16,45;CL:0000213,1.24e-14,58;CL:0000215,1.24e-14,58;CL:0002544,1.09e-13,6;CL:1000413,2.85e-12,9;CL:0000076,7.80e-10,63;CL:0005020,3.45e-09,6;CL:0002138,3.45e-09,6;CL:0005022,3.45e-09,6;CL:0000136,5.52e-09,15;CL:0002543,5.32e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.95e-22;18!CL:0005022;4.90e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000487!1.23e-10!22;UBERON:0001986!2.19e-10!18;UBERON:0004638!2.19e-10!18;UBERON:0004852!2.19e-10!18;UBERON:0006914!3.70e-10!25;UBERON:0000055!1.73e-09!69;UBERON:0002049!8.93e-09!79;UBERON:0007798!8.93e-09!79;UBERON:0004872!1.47e-08!84;UBERON:0000490!8.60e-08!138;UBERON:0001981!3.93e-07!60;UBERON:0007500!3.93e-07!60;UBERON:0004537!3.93e-07!60;UBERON:0006965!3.93e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.95e-22;18!UBERON:0001986;1.95e-22;18!UBERON:0004852;1.95e-22;18!UBERON:0000487;5.79e-21;22!UBERON:0006914;4.59e-18;25!UBERON:0003915;3.45e-12;9!UBERON:0004700;3.45e-12;9!UBERON:0001917;3.45e-12;9!UBERON:0000490;1.05e-11;33!UBERON:0000055;6.17e-08;65!UBERON:0001473;9.34e-07;8!UBERON:0004536;9.34e-07;8!UBERON:0006558;9.34e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.22e-22,18;UBERON:0001986,2.22e-22,18;UBERON:0004852,2.22e-22,18;UBERON:0000487,5.06e-21,22;UBERON:0006914,4.09e-18,25;UBERON:0000055,4.73e-13,68;UBERON:0003915,2.85e-12,9;UBERON:0004700,2.85e-12,9;UBERON:0001917,2.85e-12,9;UBERON:0002049,9.76e-11,78;UBERON:0007798,9.76e-11,78;UBERON:0004872,1.37e-09,83;UBERON:0007500,2.75e-09,59;UBERON:0001981,2.75e-09,59;UBERON:0004537,2.75e-09,59;UBERON:0006965,2.75e-09,59;UBERON:0004535,4.35e-08,109;UBERON:0001009,9.80e-08,112;UBERON:0001473,7.22e-07,8;UBERON:0004536,7.22e-07,8;UBERON:0006558,7.22e-07,8 | |||
|phase1_expression=0.54503513781167,1.2846031433459,0.704772020479856,1.0007329835313,0.446961094427288,0.872338524100369,0,1.26343974685366,0.522371256399677,0.491467873003018,0,0.436882744260345,0.527533956456907,0.247532705920093,0.331397375727916,0,0.602694528023977,0.730310090387373,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.511450247374121,0.722878304769133,0,0.144846518960824,0,0,0.661743720148475,0,0.087834785693126,0.327447688744282,0,0,0,0,0,0,0,0,1.98762407366705,2.58070378531837,1.38856200643038,2.82653970962005,0.419499436209906,0.550236083880135,1.04497483268405,2.32575083252396,3.91342888955381,3.68192674041137,2.01414658554573,0.760272105718513,2.4406205754817,3.67663080345869,0,1.42879565254528,0.22452937262617,1.12611480483322,1.53316637465883,0.949265659568129,1.09921046358244,0,0,0.436094052142534,0,0.886413581652058,0.264818361626438,0.286836620748814,0,0.560677600142307,0,0,0,0.538842688278752,0.326923806226917,0.302714855289863,0,0.234321431833797,0.936480230490962,0.570471821544449,0.597794722207204,0.469737994575059,0.323745888736263,0.140450806702248,0.408308342509787,0,0.516628905878827,0,0.247266929278557,0.910161361938026,0,0.505008341862199,0.375355559615893,0.277064115484183,0,0.612975591598039,0.150238058906597,0.680593098960126,0,0,0.635795703478686,0.300091096084402,0.92747276314595,0,0.18611685633159,0.337552664482532,0.584622030967192,0.252433774244115,0.276149695926898,0,0,1.10827308050404,0,0,0.272746120590835,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0.946454400318751,0.505754070234305,0.723033089650446,0.441175890929576,0.435758888184812,0.474541238222193,0.674156540800822,0.196221465125346,0.769494313892781,0,1.40241773803446,0,0,0,0,0.590789906681404,0,0,0.686271241194102,0.439001141634502,1.1240175325762,0.100528972411631,0.277765335475589,0.325808305310325,0,0,0.231860809950154,0.234817388471643,0.721832238805369,0.925971025153221,1.71228737011138,0,0,0,0,0,0.93733833986777,0.335964256397719,0.567100388969546,0.447792613514241,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.51336800074665,0.517086863031111,0,0.845302752556,0.26593811658487,0,0,0,0.266422179016099,0.428933980974443,1.08524321078289,0,0.325736184293735,0.710783897485092,0,0.602878754119172,0.871533458600294,0.599837947092342,0,0,0,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,1.45579603071565,1.07057393278297,0.788512075169673,0.234282829985426,0,0,1.03473071292505,1.32845119707087,0.184369168541703,0.173767228936166,0,0,0,0.215714200818617,0.106727557803444,0.606255142892519,1.66435439510497,0.30239029332968,0.248107807818777,0.306923946576125,0.280660094433074,0.128139149255701,1.02341449813341,0.321707842287215,0,0.154209693802656,0.177561725313127,0.574890092096664,1.03850885836724,0.929683027679674,0,0.601519410909855,0,0.114814448164607,0.364182336013434,0.262248829918848,0,0.15403067420883,0,0,0.105551628892876,0,0.850468526382578,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.515205058238611,0,0,0,0,1.6068392984416,0.193341436584244,0.616194468458578,0.15350367472613,0.137836572484531,0.107420244868274,0.145016693914229,0.170453254832202,0,0.330569830721956,0.576570202095319,0.127612712494584,0.2023155617111,0,0,0.6970372701606,0.308033580176089,0.532306030317022,0,0.74129687641568,0.286249773483982,0,0,0.571890581771475,0,0,0,0,0.359744915166629,0,0.235624804691373,0.404364963146632,0,0,0,0.243713489631284,1.05650146756755,0.272999822815972,0.141405431953713,0,0.551365343546124,0,0,0.578775534266688,0,0.405820753925408,0,1.12678241012897,0.430234056612155,0.196498082026242,0,0,0.211107635297664,0.658589785919804,0,0,0,0,0,0.376575203107117,0.86101074534246,0,1.33029046061003,0.229723400206959,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,1.43246690842614,1.18785872333055,0.307160702099232,0,0,0.333926115068718,0,0.211125408127993,1.19548792950642,0.552567831062295,0,0.102268682502155,0,0.933118762985422,0.988551862620595,0.179021174675609,0,0.295930216910801,0,0,0,0.185536196323703,0,0,0,1.44999915086959,0.227586896570999,0.508507300585533,0,0,0.583209226766509,0.173624994933292,0.885741385813839,0,0,0,0,0.219385397153973,0,1.11538995422883,0.461701551022782,0.113942055847001,0,0,0,1.91400695839152,0.274792780205587,1.06606955203727,0,0,0,0,0,0,0.37950746544837,0,1.26598838716816,0.326465616318295,0.141353071433941,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0.391329237864179,0,0.394584402849391,1.20990716048664,0,0.063186579628488,0,0.103688191397247,0.6646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| ||
|short_description=p6@CAV2 | |short_description=p6@CAV2 | ||
}} | }} |
Latest revision as of 07:21, 25 September 2015
Short description: | p6@CAV2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CAV2_5end |
Coexpression cluster: | NA |
Association with transcript: | 139bp_to_ENST00000495841, NM_001206748_5end |
EntrezGene: | CAV2 |
HGNC: | 1528 |
UniProt: | P51636 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.07e-30 | 24 |
blood vessel endothelial cell | 2.22e-22 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.22e-22 | 18 |
endothelial cell | 3.99e-21 | 36 |
meso-epithelial cell | 5.26e-16 | 45 |
lining cell | 1.24e-14 | 58 |
barrier cell | 1.24e-14 | 58 |
aortic endothelial cell | 1.09e-13 | 6 |
endothelial cell of artery | 2.85e-12 | 9 |
squamous epithelial cell | 7.80e-10 | 63 |
lymphangioblast | 3.45e-09 | 6 |
endothelial cell of lymphatic vessel | 3.45e-09 | 6 |
vascular lymphangioblast | 3.45e-09 | 6 |
fat cell | 5.52e-09 | 15 |
vein endothelial cell | 5.32e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.22e-22 | 18 |
endothelium | 2.22e-22 | 18 |
cardiovascular system endothelium | 2.22e-22 | 18 |
simple squamous epithelium | 5.06e-21 | 22 |
squamous epithelium | 4.09e-18 | 25 |
vessel | 4.73e-13 | 68 |
endothelial tube | 2.85e-12 | 9 |
arterial system endothelium | 2.85e-12 | 9 |
endothelium of artery | 2.85e-12 | 9 |
vasculature | 9.76e-11 | 78 |
vascular system | 9.76e-11 | 78 |
splanchnic layer of lateral plate mesoderm | 1.37e-09 | 83 |
epithelial tube open at both ends | 2.75e-09 | 59 |
blood vessel | 2.75e-09 | 59 |
blood vasculature | 2.75e-09 | 59 |
vascular cord | 2.75e-09 | 59 |
cardiovascular system | 4.35e-08 | 109 |
circulatory system | 9.80e-08 | 112 |
lymphatic vessel | 7.22e-07 | 8 |
lymph vasculature | 7.22e-07 | 8 |
lymphatic part of lymphoid system | 7.22e-07 | 8 |