FFCP PHASE1:Hg19::chr22:49089001..49089013,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:49089001..49089013,+
|short_description=p9@FAM19A5
|description=CAGE_peak_9_at_FAM19A5_5end
|association_with_transcript=-45bp_to_ENST00000406880_5end
|E...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25817 | |EntrezGene=25817 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21592 | |HGNC=21592 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-45bp_to_ENST00000406880_5end | |||
|cluster_id=chr22:49089001..49089013,+ | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_9_at_FAM19A5_5end | |||
|id=chr22:49089001..49089013,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.48e-14!12;CL:0000417!1.48e-14!12;CL:0000668!1.48e-14!12;CL:0000414!1.48e-14!12;CL:0000412!1.48e-14!12;CL:0000182!1.48e-14!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.27e-44;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.54e-44,12;CL:0000223,1.06e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.02e-74;11!UBERON:0009497;2.34e-63;13!UBERON:0001041;7.01e-28;30!UBERON:0003104;6.60e-27;31!UBERON:0006241;2.89e-12;3!UBERON:0003057;2.89e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:7;3.56e-13;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,3.82e-14,39 | |||
|ontology_enrichment_uberon=UBERON:0002240!4.14e-21!3;UBERON:0002107!3.00e-17!19;UBERON:0006925!3.00e-17!19;UBERON:0008836!3.00e-17!19;UBERON:0009497!1.11e-16!25;UBERON:0000015!1.11e-16!25;UBERON:0002423!1.11e-16!25;UBERON:0006235!1.11e-16!25;UBERON:0004161!1.11e-16!25;UBERON:0005057!6.87e-16!26;UBERON:0008835!8.84e-15!22;UBERON:0003894!8.84e-15!22;UBERON:0009854!4.23e-14!23;UBERON:0002365!2.77e-13!31;UBERON:0002330!2.77e-13!31;UBERON:0007023!3.35e-13!115;UBERON:0007499!6.67e-13!25;UBERON:0005174!6.81e-13!5;UBERON:0001137!6.81e-13!5;UBERON:0009856!2.26e-12!26;UBERON:0002368!1.67e-11!35;UBERON:0005177!2.66e-11!107;UBERON:0003076!5.85e-11!15;UBERON:0003057!5.85e-11!15;UBERON:0005172!9.99e-11!55;UBERON:0005173!9.99e-11!55;UBERON:0002417!1.67e-09!61;UBERON:0000916!1.67e-09!61;UBERON:0003929!6.93e-09!54;UBERON:0000949!1.09e-08!45;UBERON:0002038!2.71e-08!1;UBERON:0009661!2.71e-08!1;UBERON:0001831!2.90e-08!1;UBERON:0001567!2.90e-08!1;UBERON:0008801!2.90e-08!1;UBERON:0002530!4.82e-08!59;UBERON:0001301!6.19e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.32e-43;19!UBERON:0006925;1.32e-43;19!UBERON:0002423;2.56e-33;25!UBERON:0002365;5.68e-25;31!UBERON:0002330;5.68e-25;31!UBERON:0002368;5.42e-24;33!UBERON:0000949;1.26e-15;43!UBERON:0002240;2.89e-12;3!UBERON:0005174;2.89e-12;3!UBERON:0001137;2.89e-12;3!UBERON:0002417;2.57e-11;58!UBERON:0000916;2.57e-11;58!UBERON:0005172;5.99e-10;52!UBERON:0005173;5.99e-10;52!UBERON:0002530;1.13e-08;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.44e-43,19;UBERON:0006925,1.44e-43,19;UBERON:0008836,1.44e-43,19;UBERON:0008835,9.92e-38,22;UBERON:0003894,9.92e-38,22;UBERON:0009854,4.03e-36,23;UBERON:0007499,2.74e-33,25;UBERON:0009497,2.74e-33,25;UBERON:0000015,2.74e-33,25;UBERON:0002423,2.74e-33,25;UBERON:0006235,2.74e-33,25;UBERON:0004161,2.74e-33,25;UBERON:0009856,4.90e-32,26;UBERON:0002365,5.59e-27,31;UBERON:0002330,5.59e-27,31;UBERON:0002368,5.71e-24,35;UBERON:0000949,8.89e-19,45;UBERON:0003929,9.69e-16,54;UBERON:0005172,9.69e-16,54;UBERON:0005173,9.69e-16,54;UBERON:0002530,1.89e-14,59;UBERON:0002417,3.22e-14,60;UBERON:0000916,3.22e-14,60;UBERON:0002240,2.59e-12,3;UBERON:0005174,2.59e-12,3;UBERON:0001137,2.59e-12,3;UBERON:0005911,1.58e-10,82;UBERON:0001041,6.00e-10,87;UBERON:0005177,1.27e-08,101;UBERON:0009569,8.20e-08,112;UBERON:0003914,1.71e-07,117;UBERON:0004921,2.25e-07,118;UBERON:0005256,3.36e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,1.16495949527454,11.1872118876258,9.31299199707181,11.3237953675031,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0.206686796501184,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0.297046400327086,1.6906229103336,0,0,0,0,0,0,0,0,0,0.716697915757256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,1.16495949527454,11.1872118876258,9.31299199707181,11.3237953675031,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0.206686796501184,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0.297046400327086,1.6906229103336,0,0,0,0,0,0,0,0,0,0.716697915757256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p9@FAM19A5 | |||
}} | }} |
Latest revision as of 07:26, 25 September 2015
Short description: | p9@FAM19A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_FAM19A5_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | -45bp_to_ENST00000406880_5end |
EntrezGene: | FAM19A5 |
HGNC: | 21592 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.54e-44 | 12 |
endodermal cell | 1.06e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 1.44e-43 | 19 |
digestive gland | 1.44e-43 | 19 |
liver bud | 1.44e-43 | 19 |
hepatic diverticulum | 9.92e-38 | 22 |
liver primordium | 9.92e-38 | 22 |
digestive tract diverticulum | 4.03e-36 | 23 |
epithelial sac | 2.74e-33 | 25 |
epithelium of foregut-midgut junction | 2.74e-33 | 25 |
anatomical boundary | 2.74e-33 | 25 |
hepatobiliary system | 2.74e-33 | 25 |
foregut-midgut junction | 2.74e-33 | 25 |
septum transversum | 2.74e-33 | 25 |
sac | 4.90e-32 | 26 |
exocrine gland | 5.59e-27 | 31 |
exocrine system | 5.59e-27 | 31 |
endocrine gland | 5.71e-24 | 35 |
endocrine system | 8.89e-19 | 45 |
gut epithelium | 9.69e-16 | 54 |
abdomen element | 9.69e-16 | 54 |
abdominal segment element | 9.69e-16 | 54 |
gland | 1.89e-14 | 59 |
abdominal segment of trunk | 3.22e-14 | 60 |
abdomen | 3.22e-14 | 60 |
spinal cord | 2.59e-12 | 3 |
dorsal region element | 2.59e-12 | 3 |
dorsum | 2.59e-12 | 3 |
endo-epithelium | 1.58e-10 | 82 |
foregut | 6.00e-10 | 87 |
trunk region element | 1.27e-08 | 101 |
subdivision of trunk | 8.20e-08 | 112 |
epithelial tube | 1.71e-07 | 117 |
subdivision of digestive tract | 2.25e-07 | 118 |
trunk mesenchyme | 3.36e-07 | 122 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 3.82e-14 | 39 |