FFCP PHASE1:Hg19::chr5:142586417..142586428,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23092 | |EntrezGene=23092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17073 | |HGNC=17073 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-334bp_to_ENST00000421521_5end | |association_with_transcript=-334bp_to_ENST00000421521_5end | ||
|cluster_id=chr5:142586417..142586428,+ | |||
|coexpression_cluster_id=C36 | |coexpression_cluster_id=C36 | ||
|description=CAGE_peak_28_at_ARHGAP26_5end | |description=CAGE_peak_28_at_ARHGAP26_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!6.89e-31!24;CL:0000826!6.89e-31!24;CL:0000838!2.88e-18!52;CL:0000542!6.54e-18!53;CL:0000051!6.54e-18!53;CL:0000946!2.63e-16!1;CL:0000786!2.63e-16!1;CL:0000980!2.63e-16!1;CL:0000785!8.09e-09!2;CL:0000955!8.09e-09!2;CL:0000818!8.09e-09!2;CL:0000954!8.09e-09!2;CL:0000816!8.09e-09!2;CL:0002087!1.54e-07!119;CL:0000988!2.02e-07!182;CL:0002031!3.29e-07!124 | |ontology_enrichment_celltype=CL:0000945!6.89e-31!24;CL:0000826!6.89e-31!24;CL:0000838!2.88e-18!52;CL:0000542!6.54e-18!53;CL:0000051!6.54e-18!53;CL:0000946!2.63e-16!1;CL:0000786!2.63e-16!1;CL:0000980!2.63e-16!1;CL:0000785!8.09e-09!2;CL:0000955!8.09e-09!2;CL:0000818!8.09e-09!2;CL:0000954!8.09e-09!2;CL:0000816!8.09e-09!2;CL:0002087!1.54e-07!119;CL:0000988!2.02e-07!182;CL:0002031!3.29e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.88e-19;24 | |ontology_enrichment_celltype_v019=CL:0000945;1.88e-19;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.88e-19,24;CL:0000826,1.88e-19,24;CL:0000838,1.73e-09,52;CL:0000542,2.52e-09,53;CL:0000051,2.52e-09,53 | |||
|ontology_enrichment_development_v019=UBERON:0004872;2.35e-08;7 | |ontology_enrichment_development_v019=UBERON:0004872;2.35e-08;7 | ||
|ontology_enrichment_disease=DOID:630!1.21e-16!1;DOID:0050177!1.21e-16!1;DOID:0050427!1.21e-16!1;DOID:2355!1.41e-16!1;DOID:74!5.94e-09!2;DOID:0060058!4.39e-07!10 | |ontology_enrichment_disease=DOID:630!1.21e-16!1;DOID:0050177!1.21e-16!1;DOID:0050427!1.21e-16!1;DOID:2355!1.41e-16!1;DOID:74!5.94e-09!2;DOID:0060058!4.39e-07!10 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001882!3.07e-16!1;UBERON:0005403!3.07e-16!1 | |ontology_enrichment_uberon=UBERON:0001882!3.07e-16!1;UBERON:0005403!3.07e-16!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.12e-17;3!UBERON:0004177;3.60e-11;5!UBERON:0005057;3.60e-11;5 | |ontology_enrichment_uberon_v019=UBERON:0002106;1.12e-17;3!UBERON:0004177;3.60e-11;5!UBERON:0005057;3.60e-11;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.12e-17,3;UBERON:0004854,1.12e-17,3;UBERON:0009034,1.12e-17,3;UBERON:0002095,1.12e-17,3;UBERON:0004782,1.12e-17,3;UBERON:0003281,1.12e-17,3;UBERON:0009664,1.12e-17,3;UBERON:0002296,1.12e-17,3;UBERON:0005602,1.12e-17,3;UBERON:0001179,1.12e-17,3;UBERON:0006293,1.12e-17,3;UBERON:0004177,2.35e-08,7;UBERON:0005057,2.35e-08,7;UBERON:0000945,1.80e-07,8;UBERON:0010039,1.80e-07,8 | |||
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|short_description=p28@ARHGAP26 | |short_description=p28@ARHGAP26 | ||
}} | }} |
Latest revision as of 07:40, 25 September 2015
Short description: | p28@ARHGAP26 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_ARHGAP26_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | -334bp_to_ENST00000421521_5end |
EntrezGene: | ARHGAP26 |
HGNC: | 17073 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.88e-19 | 24 |
pro-B cell | 1.88e-19 | 24 |
lymphoid lineage restricted progenitor cell | 1.73e-09 | 52 |
lymphocyte | 2.52e-09 | 53 |
common lymphoid progenitor | 2.52e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.12e-17 | 3 |
gastrointestinal system mesentery | 1.12e-17 | 3 |
stomach region | 1.12e-17 | 3 |
mesentery | 1.12e-17 | 3 |
gastrointestinal system serosa | 1.12e-17 | 3 |
mesentery of stomach | 1.12e-17 | 3 |
gut mesentery | 1.12e-17 | 3 |
dorsal mesentery | 1.12e-17 | 3 |
dorsal mesogastrium | 1.12e-17 | 3 |
peritoneal cavity | 1.12e-17 | 3 |
spleen primordium | 1.12e-17 | 3 |
hemopoietic organ | 2.35e-08 | 7 |
immune organ | 2.35e-08 | 7 |
stomach | 1.80e-07 | 8 |
food storage organ | 1.80e-07 | 8 |