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FFCP PHASE1:Mm9::chr2:118993494..118993515,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr2:118993494..118993515,+
|DHSsupport=NA
|short_description=p2@Gchfr
|DPIdataset=NA
|description=CAGE_peak_2_at_Gchfr_5end
|association_with_transcript=0bp_to_ENSMUST00000057454_5end
|EntrezGene=320415
|EntrezGene=320415
|HGNC=
|HGNC=
|MCL_coexpression_id=8
|TSSclassifier=NA
|UniProt=P99025
|UniProt=P99025
|association_with_transcript=0bp_to_ENSMUST00000057454_5end
|cluster_id=chr2:118993494..118993515,+
|description=CAGE_peak_2_at_Gchfr_5end
|id=chr2:118993494..118993515,+
|ontology_enrichment_celltype=CL:0000223!5.01e-07!20;CL:0000066!6.69e-07!25
|ontology_enrichment_celltype_v019_2=CL:0000066,5.29e-09,25;CL:0000223,1.65e-08,20
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0009854!2.55e-13!23;UBERON:0009856!2.55e-13!23;UBERON:0002107!6.37e-13!22;UBERON:0007499!6.37e-13!22;UBERON:0006925!6.37e-13!22;UBERON:0009497!6.37e-13!22;UBERON:0000015!6.37e-13!22;UBERON:0002423!6.37e-13!22;UBERON:0006235!6.37e-13!22;UBERON:0008835!6.37e-13!22;UBERON:0003894!6.37e-13!22;UBERON:0004161!6.37e-13!22;UBERON:0008836!6.37e-13!22;UBERON:0002365!7.26e-12!25;UBERON:0002330!7.26e-12!25;UBERON:0005172!1.18e-10!49;UBERON:0005173!1.18e-10!49;UBERON:0002417!1.18e-10!49;UBERON:0000916!1.18e-10!49;UBERON:0009569!4.26e-08!66
|ontology_enrichment_uberon_v019_2=UBERON:0009854,5.15e-18,23;UBERON:0009856,5.15e-18,23;UBERON:0002107,1.97e-17,22;UBERON:0007499,1.97e-17,22;UBERON:0006925,1.97e-17,22;UBERON:0009497,1.97e-17,22;UBERON:0000015,1.97e-17,22;UBERON:0002423,1.97e-17,22;UBERON:0006235,1.97e-17,22;UBERON:0008835,1.97e-17,22;UBERON:0003894,1.97e-17,22;UBERON:0004161,1.97e-17,22;UBERON:0008836,1.97e-17,22;UBERON:0002365,1.19e-15,25;UBERON:0002330,1.19e-15,25;UBERON:0000160,2.99e-12,31;UBERON:0004119,6.84e-10,118;UBERON:0000925,6.84e-10,118;UBERON:0006595,6.84e-10,118;UBERON:0001007,9.75e-10,116;UBERON:0001555,9.75e-10,116;UBERON:0007026,9.75e-10,116;UBERON:0004921,6.74e-09,114;UBERON:0005172,1.79e-08,49;UBERON:0005173,1.79e-08,49;UBERON:0002417,1.79e-08,49;UBERON:0000916,1.79e-08,49;UBERON:0005256,2.52e-08,45;UBERON:0003929,6.04e-08,55;UBERON:0003104,4.24e-07,61;UBERON:0009142,4.24e-07,61
|phase1_expression=0.160148847104794,5.58360652222978,7.73498706962211,8.46899791659124,9.5170188689806,0.671517087647559,1.63528848416868,0,0,0,0.171217968225505,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0.935476191661768,0.198581902401771,0.261199789138935,3.67982572424835,5.27641346454491,7.46501553349526,5.59990595006797,3.01659725760245,8.17100703662408,2.77233142735924,3.32595765982957,1.27006134691926,0,0,0.288851619751275,1.16364251750945,0.612508068787107,0,0,0.523523743973798,0,0,0,1.00717454380462,2.12891555560981,0.367093504323363,5.47673941043627,1.52617609466313,8.34807494390993,7.58276606389705,5.31948402176378,8.62515386189829,0,0,0,1.28629718017973,0,0,0,0,0,6.09920157724438,6.22506357277798,1.7997994345628,0.988866362566974,2.1314403448383,0.599200221036809,1.15265491596466,0.207379224616955,0.135005938331691,0,0.571301968807607,0.441737081903227,0,0,0,2.20231761998777,0.383062014255563,1.0752457327937,0.263772575460388,0.0914876436024097,0,2.51264699101243,1.12552522006336,0.30559649555362,0.589257170947335,0.284743361598206,0,0.151452386666368,0.377857800533928,2.31891590961342,30.1148356943485,23.1190253460635,36.6998170313716,31.8390444549358,37.1862316290789,7.44355426698285,4.60161870960756,5.45550609666024,9.54016851177919,0,1.28326477414318,0,7.11066703153331,3.24736561516821,4.05375784760158,3.53867111510348,11.9893073705013,0.258937883647172,0.445326417194474,0.520455980298408,0.608930956624282,0.922461989024234,0.753613202763113,0.587943535678524,0.251333182659351,0.494389935468748,0.433798070759735,0,0.161766849947409,0.220841518460394,0,3.72783522436244,0.292780797011547,0.628340120440365,5.8755122697976,0.11981512450592,0,0.254140454146129,0.449371918214468,0,0,0,0,0.41557608911912,0,0,0.124406970610093,1.51633655060205,0.210441855886474,0.260240885925407,0.459804208866946,0,0.150704817835715,0,0,0.281105173679186,0.258703370739016,0,0.189106080167819,0,0.219195732427575,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0.257347907114715,0,0.828503090142008,0.234526059981096,0,0.23674473558521,0.196764231747404,0.308534225774757,0.697601834251224,0.536546802799238,0.467061369468678,0.16455984991348,0,0.0810688095458557,0.584799949701329,0.658650345873152,0.402619256281115,0.420579897128254,0,8.26046957459495,7.66906643324278,0,0.232236671860439,0.77320476793256,2.8235693447268,4.89231696458715,7.79925067061493,8.0669940462567,7.08205505313247,4.02136334080431,4.77495532898762,2.9244613067868,8.08937467788799,3.45820879799511,3.98282546508734,0.569003702859245,0.913988100877831,1.1270773567308,1.4255592949172,0.775809948670503,0.98190147846446,1.13825766823663,1.77132177575523,4.08196692387575,4.44229790118482,25.4949259294948,0.500535317148282,1.17935397067922,2.69834534861824,3.65148218499305,6.99413763282009,7.38414970166117,9.78166867332756,8.91743747262695,13.7280706594041,7.18841032636773,14.1413560114031,18.0981850406445,16.1650481886152,19.0161258333227,14.9557491622644,0.184753190166605,0,0.162964976442026,0.509235257325564,0.469380496577004,0.502518772325447,0.714130922658041,0,0.157635144106191,0.44292937929755,0.478364305972461,0.327726629431476,0,0.144649058581512,0,1.08781136763742,1.96705709207614,0.827810238914197,0.160550589987792,0.468846746368813,3.77050374366353,0,1.26203287766503,1.56175497718655,0.430846795465598,0,0.668396022247182,0.566153061577665,0.809621403349789,0.292255857911312,0.395287777946524,0,0.141940085208269,0,0,0,0,0.242780636154981,0.604647113929502,0.377210159511796,0.590603785761546,0,1.03371317267288,0,0.712994756769443,0,0,0,0,0.36012218806262,0.258717367565509,0.214337035031592,0.532020700926821,0.178368817602071,0.164549020602121,0.304464949114599,0.938686832254841,3.1774810629573,1.7642271844397,0.16488625294148,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,3.20628920292836,0,0.512612642393558,0.82554747185289,0.555583582109135,0,0.27338845544205,0.228778173206523,0,0,0,0,0.474503990371703,0,0.324016022465404,0.209088296014469,0.436725127492355,0.539457385539283,1.1571483801547,0.26175594198403,1.03691978633434,0,1.12738587736838,0.299033092087958,0,0.583353565032143,0.129159823477731,0.506868376472335,0.234714477291508,0.5208175393758,0.104859344425711,0.483168241652012,0.288030006257865,0.316011120628178,0.810900861160657,0.205421914329655,0.25984164595559,0.179026695667481,0,0,0,0,0.0762068066549998,0.201652370273681,0.194915761479505,0.0962118416403295,0.233753804363138,0,3.10780334723691,0.717710852875806,2.85403847818933,0.386379188064381,0,0,0.214368379079066,3.51100472824754,0,0,0,0,0,0,0,0,0,0,0.207574695168353,1.99512436700516,0.170733605754134,1.21553358534147,1.25767897576789,2.02227859295016,0.888986911206461,0.824140228955577,0.320919209591815,0.758091635291392,1.01391719956096,1.13175804831646,0.842773567228942,0.384150914429216,1.03383844120104,1.42888107384922,0.811190281613988,0.578727661391115,1.23625770240992,0.294397840268795,0.685738504770831,1.59728225543404,1.1921809497366,0.726732083161643,0.752875043322645,0.338458431566706,1.82927972872773,0.526139422875686,1.22223702461276,1.12228454331548,0.474540072496697,1.18205378850676,1.22769312950907,0.929621047115796,1.35034627686799,0.499621155875892,1.40358965067245,1.07435527024149,0,0,0
|phase1_expression=0.160148847104794,5.58360652222978,7.73498706962211,8.46899791659124,9.5170188689806,0.671517087647559,1.63528848416868,0,0,0,0.171217968225505,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0.935476191661768,0.198581902401771,0.261199789138935,3.67982572424835,5.27641346454491,7.46501553349526,5.59990595006797,3.01659725760245,8.17100703662408,2.77233142735924,3.32595765982957,1.27006134691926,0,0,0.288851619751275,1.16364251750945,0.612508068787107,0,0,0.523523743973798,0,0,0,1.00717454380462,2.12891555560981,0.367093504323363,5.47673941043627,1.52617609466313,8.34807494390993,7.58276606389705,5.31948402176378,8.62515386189829,0,0,0,1.28629718017973,0,0,0,0,0,6.09920157724438,6.22506357277798,1.7997994345628,0.988866362566974,2.1314403448383,0.599200221036809,1.15265491596466,0.207379224616955,0.135005938331691,0,0.571301968807607,0.441737081903227,0,0,0,2.20231761998777,0.383062014255563,1.0752457327937,0.263772575460388,0.0914876436024097,0,2.51264699101243,1.12552522006336,0.30559649555362,0.589257170947335,0.284743361598206,0,0.151452386666368,0.377857800533928,2.31891590961342,30.1148356943485,23.1190253460635,36.6998170313716,31.8390444549358,37.1862316290789,7.44355426698285,4.60161870960756,5.45550609666024,9.54016851177919,0,1.28326477414318,0,7.11066703153331,3.24736561516821,4.05375784760158,3.53867111510348,11.9893073705013,0.258937883647172,0.445326417194474,0.520455980298408,0.608930956624282,0.922461989024234,0.753613202763113,0.587943535678524,0.251333182659351,0.494389935468748,0.433798070759735,0,0.161766849947409,0.220841518460394,0,3.72783522436244,0.292780797011547,0.628340120440365,5.8755122697976,0.11981512450592,0,0.254140454146129,0.449371918214468,0,0,0,0,0.41557608911912,0,0,0.124406970610093,1.51633655060205,0.210441855886474,0.260240885925407,0.459804208866946,0,0.150704817835715,0,0,0.281105173679186,0.258703370739016,0,0.189106080167819,0,0.219195732427575,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0.257347907114715,0,0.828503090142008,0.234526059981096,0,0.23674473558521,0.196764231747404,0.308534225774757,0.697601834251224,0.536546802799238,0.467061369468678,0.16455984991348,0,0.0810688095458557,0.584799949701329,0.658650345873152,0.402619256281115,0.420579897128254,0,8.26046957459495,7.66906643324278,0,0.232236671860439,0.77320476793256,2.8235693447268,4.89231696458715,7.79925067061493,8.0669940462567,7.08205505313247,4.02136334080431,4.77495532898762,2.9244613067868,8.08937467788799,3.45820879799511,3.98282546508734,0.569003702859245,0.913988100877831,1.1270773567308,1.4255592949172,0.775809948670503,0.98190147846446,1.13825766823663,1.77132177575523,4.08196692387575,4.44229790118482,25.4949259294948,0.500535317148282,1.17935397067922,2.69834534861824,3.65148218499305,6.99413763282009,7.38414970166117,9.78166867332756,8.91743747262695,13.7280706594041,7.18841032636773,14.1413560114031,18.0981850406445,16.1650481886152,19.0161258333227,14.9557491622644,0.184753190166605,0,0.162964976442026,0.509235257325564,0.469380496577004,0.502518772325447,0.714130922658041,0,0.157635144106191,0.44292937929755,0.478364305972461,0.327726629431476,0,0.144649058581512,0,1.08781136763742,1.96705709207614,0.827810238914197,0.160550589987792,0.468846746368813,3.77050374366353,0,1.26203287766503,1.56175497718655,0.430846795465598,0,0.668396022247182,0.566153061577665,0.809621403349789,0.292255857911312,0.395287777946524,0,0.141940085208269,0,0,0,0,0.242780636154981,0.604647113929502,0.377210159511796,0.590603785761546,0,1.03371317267288,0,0.712994756769443,0,0,0,0,0.36012218806262,0.258717367565509,0.214337035031592,0.532020700926821,0.178368817602071,0.164549020602121,0.304464949114599,0.938686832254841,3.1774810629573,1.7642271844397,0.16488625294148,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,3.20628920292836,0,0.512612642393558,0.82554747185289,0.555583582109135,0,0.27338845544205,0.228778173206523,0,0,0,0,0.474503990371703,0,0.324016022465404,0.209088296014469,0.436725127492355,0.539457385539283,1.1571483801547,0.26175594198403,1.03691978633434,0,1.12738587736838,0.299033092087958,0,0.583353565032143,0.129159823477731,0.506868376472335,0.234714477291508,0.5208175393758,0.104859344425711,0.483168241652012,0.288030006257865,0.316011120628178,0.810900861160657,0.205421914329655,0.25984164595559,0.179026695667481,0,0,0,0,0.0762068066549998,0.201652370273681,0.194915761479505,0.0962118416403295,0.233753804363138,0,3.10780334723691,0.717710852875806,2.85403847818933,0.386379188064381,0,0,0.214368379079066,3.51100472824754,0,0,0,0,0,0,0,0,0,0,0.207574695168353,1.99512436700516,0.170733605754134,1.21553358534147,1.25767897576789,2.02227859295016,0.888986911206461,0.824140228955577,0.320919209591815,0.758091635291392,1.01391719956096,1.13175804831646,0.842773567228942,0.384150914429216,1.03383844120104,1.42888107384922,0.811190281613988,0.578727661391115,1.23625770240992,0.294397840268795,0.685738504770831,1.59728225543404,1.192180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|short_description=p2@Gchfr
}}
}}

Latest revision as of 14:01, 25 September 2015

Short description:p2@Gchfr
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Gchfr_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: 0bp_to_ENSMUST00000057454_5end
EntrezGene:Gchfr
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Gchfr

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.58
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I67.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I38.47
CD326+ enterocyte, pool2.CNhs13197.11849-124I49.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.28
GP2+ M cell, pool1.CNhs13228.11845-124H97.47
GP2+ M cell, pool2.CNhs13231.11846-124I15.60
GP2+ M cell, pool3.CNhs13240.11847-124I23.02
Ileum epithelium, pool1.CNhs13199.10252-104B98.17
Ileum epithelium, pool2.CNhs13232.10253-104C12.77
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.13
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.35
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.32
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.10
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F730.11
Mouse hepatocyte, donor1.CNhs13078.11714-123C423.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C836.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F431.84
Mouse hepatocyte, donor8.CNhs13091.11824-124F637.19
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.44
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I89.54
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.05
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B611.99
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H75.88
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I38.26
intestine, adult.CNhs10496.178-9A37.67
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H42.82
intestine, embryo E17.CNhs10582.482-18D34.89
intestine, embryo E18.CNhs10526.1289-20F77.80
intestine, neonate N00.CNhs11126.644-26D18.07
intestine, neonate N01.CNhs11192.1322-23E97.08
intestine, neonate N06.CNhs11102.688-20B84.02
intestine, neonate N07.CNhs11095.720-20F24.77
intestine, neonate N10.CNhs11098.755-23A52.92
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E33.46
intestine, neonate N30.CNhs11131.1384-42G13.98
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.98
kidney, neonate N10.CNhs11206.758-6D51.14
kidney, neonate N20.CNhs11113.832-19I11.77
kidney, neonate N25.CNhs11122.1353-25F34.08
kidney, neonate N30.CNhs11203.1385-42H14.44
liver, adult pregnant day01.CNhs10466.508-5B225.49
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D73.65
liver, embryo E16.CNhs10523.462-17F56.99
liver, embryo E17.CNhs10510.481-18A37.38
liver, embryo E18.CNhs10579.499-43G49.78
liver, neonate N00.CNhs11117.641-24F48.92
liver, neonate N03.CNhs11123.1345-25G213.73
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H214.14
liver, neonate N10.CNhs11115.751-24B918.10
liver, neonate N20.CNhs11220.823-25A316.17
liver, neonate N25.CNhs11198.1368-26H119.02
liver, neonate N30.CNhs11106.1382-42D114.96
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.77
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G33.18
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A91.16
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.72
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.85
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell5.29e-0925
endodermal cell1.65e-0820

Uber anatomy
Ontology termp-valuen
digestive tract diverticulum5.15e-1823
sac5.15e-1823
liver1.97e-1722
epithelial sac1.97e-1722
digestive gland1.97e-1722
epithelium of foregut-midgut junction1.97e-1722
anatomical boundary1.97e-1722
hepatobiliary system1.97e-1722
foregut-midgut junction1.97e-1722
hepatic diverticulum1.97e-1722
liver primordium1.97e-1722
septum transversum1.97e-1722
liver bud1.97e-1722
exocrine gland1.19e-1525
exocrine system1.19e-1525
intestine2.99e-1231
endoderm-derived structure6.84e-10118
endoderm6.84e-10118
presumptive endoderm6.84e-10118
digestive system9.75e-10116
digestive tract9.75e-10116
primitive gut9.75e-10116
subdivision of digestive tract6.74e-09114
abdomen element1.79e-0849
abdominal segment element1.79e-0849
abdominal segment of trunk1.79e-0849
abdomen1.79e-0849
trunk mesenchyme2.52e-0845
gut epithelium6.04e-0855
mesenchyme4.24e-0761
entire embryonic mesenchyme4.24e-0761
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