FFCP PHASE1:Mm9::chr2:119055564..119055580,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72112 | |EntrezGene=72112 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q7TT52,A2AV56 | |UniProt=Q7TT52,A2AV56 | ||
|association_with_transcript=20bp_to_ENSMUST00000110820,NM_028104,uc008ltj.2,uc012cbr.1_5end | |association_with_transcript=20bp_to_ENSMUST00000110820,NM_028104,uc008ltj.2,uc012cbr.1_5end | ||
|cluster_id=chr2:119055564..119055580,- | |||
|description=CAGE_peak_2_at_Ppp1r14d_5end | |description=CAGE_peak_2_at_Ppp1r14d_5end | ||
|id=chr2:119055564..119055580,- | |id=chr2:119055564..119055580,- | ||
|ontology_enrichment_celltype=CL:0002563!4.37e-10!9;CL:0002251!4.37e-10!9;CL:0000239!2.89e-07!6;CL:0000677!2.89e-07!6;CL:0000212!2.89e-07!6;CL:0000584!2.89e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.27e-14,9;CL:0002251,2.27e-14,9;CL:0000239,3.86e-10,6;CL:0000677,3.86e-10,6;CL:0000584,3.86e-10,6;CL:0000075,1.49e-08,7;CL:0002076,8.34e-08,15;CL:0000066,1.36e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.14e-18!43;UBERON:0005409!1.31e-17!59;UBERON:0000344!2.12e-16!15;UBERON:0001242!1.31e-14!13;UBERON:0000060!1.31e-14!13;UBERON:0001262!1.31e-14!13;UBERON:0004786!1.31e-14!13;UBERON:0003350!4.37e-10!9;UBERON:0004808!4.37e-10!9;UBERON:0001277!4.37e-10!9;UBERON:0004923!2.75e-09!24;UBERON:0001007!2.39e-08!128;UBERON:0001555!2.39e-08!128;UBERON:0007026!2.39e-08!128;UBERON:0004119!5.33e-08!130;UBERON:0000925!5.33e-08!130;UBERON:0006595!5.33e-08!130;UBERON:0000485!9.41e-08!11;UBERON:0004921!2.09e-07!126;UBERON:0004185!2.09e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.44e-42,31;UBERON:0005409,3.42e-31,47;UBERON:0000344,7.12e-24,15;UBERON:0001242,3.56e-21,13;UBERON:0001262,3.56e-21,13;UBERON:0004786,3.56e-21,13;UBERON:0003350,2.27e-14,9;UBERON:0004808,2.27e-14,9;UBERON:0001277,2.27e-14,9;UBERON:0004923,2.63e-13,24;UBERON:0000485,2.23e-11,11;UBERON:0001007,3.83e-11,116;UBERON:0001555,3.83e-11,116;UBERON:0007026,3.83e-11,116;UBERON:0004119,8.63e-11,118;UBERON:0000925,8.63e-11,118;UBERON:0006595,8.63e-11,118;UBERON:0004921,9.40e-10,114;UBERON:0002108,4.60e-08,4 | |||
|phase1_expression=0,65.2584012285605,60.0598995994188,35.6907769342059,50.0895729946347,14.2697381125106,23.5948767001481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,24.798825532978,27.5291137280604,90.7286503301732,55.5682975045206,55.5915780329594,148.218267175972,73.3407677601399,76.0535651547695,0,0,0,34.3733427504017,36.5716219788683,29.1962179455188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66844398250329,0,0,0,0,0,0,0,0,0,0,7.87868770061514,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,54.0536107532554,0,0,126.96215643867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,247.153249671881,53.6834650326995,0,0,2.06187938115349,6.6555563125703,13.1203045868473,28.914295169109,84.9407020164676,36.3984689940064,29.1548842208313,23.2779072288146,30.9992898519401,83.5902050048426,103.097849790229,89.8127142377196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.554259570499814,0,0,0,0.234690248288502,0.167506257441816,0,0,0,0.44292937929755,0.159454768657487,0.491589944147214,1.03610989119537,2.16973587872267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0,0,0.989820737835213,0,0,0,0,0,0,4.13485269069154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,54.7983972864119,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0.86404272657441,0.209088296014469,2.40198820120795,0.134864346384821,0.165306911450672,0,90.082406437796,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0.73260649706906,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.919217542250071,0.888986911206461,1.23621034343337,2.56735367673452,0.505394423527595,0.760437899670719,1.13175804831646,1.21733959710847,1.02440243847791,0.918967503289812,0.476293691283074,0.695305955669133,0.578727661391115,0.824171801606613,0.883193520806384,1.37147700954166,2.12970967391205,1.90748951957857,1.45346416632329,1.31753132581463,0.761531471025089,0.548783918618318,1.05227884575137,1.22223702461276,0.561142271657738,1.54225523561426,0.886540341380071,0.409231043169689,1.08455788830176,1.35034627686799,0,0.701794825336225,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0,65.2584012285605,60.0598995994188,35.6907769342059,50.0895729946347,14.2697381125106,23.5948767001481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,24.798825532978,27.5291137280604,90.7286503301732,55.5682975045206,55.5915780329594,148.218267175972,73.3407677601399,76.0535651547695,0,0,0,34.3733427504017,36.5716219788683,29.1962179455188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66844398250329,0,0,0,0,0,0,0,0,0,0,7.87868770061514,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,54.0536107532554,0,0,126.96215643867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,247.153249671881,53.6834650326995,0,0,2.06187938115349,6.6555563125703,13.1203045868473,28.914295169109,84.9407020164676,36.3984689940064,29.1548842208313,23.2779072288146,30.9992898519401,83.5902050048426,103.097849790229,89.8127142377196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.554259570499814,0,0,0,0.234690248288502,0.167506257441816,0,0,0,0.44292937929755,0.159454768657487,0.491589944147214,1.03610989119537,2.16973587872267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0,0,0.989820737835213,0,0,0,0,0,0,4.13485269069154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,54.7983972864119,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0.86404272657441,0.209088296014469,2.40198820120795,0.134864346384821,0.165306911450672,0,90.082406437796,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0.73260649706906,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.919217542250071,0.888986911206461,1.23621034343337,2.56735367673452,0.505394423527595,0.760437899670719,1.13175804831646,1.21733959710847,1.02440243847791,0.918967503289812,0.476293691283074,0.695305955669133,0.578727661391115,0.824171801606613,0.883193520806384,1.37147700954166,2.12970967391205,1.90748951957857,1.45346416632329,1.31753132581463,0.761531471025089,0.548783918618318,1.05227884575137,1.22223702461276,0.561142271657738,1.54225523561426,0.886540341380071,0.409231043169689,1.08455788830176,1.35034627686799,0,0.701794825336225,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p2@Ppp1r14d | |short_description=p2@Ppp1r14d | ||
}} | }} |
Latest revision as of 14:02, 25 September 2015
Short description: | p2@Ppp1r14d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ppp1r14d_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 20bp_to_ENSMUST00000110820, NM_028104, uc008ltj.2, uc012cbr.1_5end |
EntrezGene: | Ppp1r14d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.27e-14 | 9 |
epithelial cell of alimentary canal | 2.27e-14 | 9 |
brush border epithelial cell | 3.86e-10 | 6 |
gut absorptive cell | 3.86e-10 | 6 |
enterocyte | 3.86e-10 | 6 |
columnar/cuboidal epithelial cell | 1.49e-08 | 7 |
endo-epithelial cell | 8.34e-08 | 15 |
epithelial cell | 1.36e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.44e-42 | 31 |
gastrointestinal system | 3.42e-31 | 47 |
mucosa | 7.12e-24 | 15 |
intestinal mucosa | 3.56e-21 | 13 |
wall of intestine | 3.56e-21 | 13 |
gastrointestinal system mucosa | 3.56e-21 | 13 |
epithelium of mucosa | 2.27e-14 | 9 |
gastrointestinal system epithelium | 2.27e-14 | 9 |
intestinal epithelium | 2.27e-14 | 9 |
organ component layer | 2.63e-13 | 24 |
simple columnar epithelium | 2.23e-11 | 11 |
digestive system | 3.83e-11 | 116 |
digestive tract | 3.83e-11 | 116 |
primitive gut | 3.83e-11 | 116 |
endoderm-derived structure | 8.63e-11 | 118 |
endoderm | 8.63e-11 | 118 |
presumptive endoderm | 8.63e-11 | 118 |
subdivision of digestive tract | 9.40e-10 | 114 |
small intestine | 4.60e-08 | 4 |