FFCP PHASE1:Mm9::chr2:119568025..119568041,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:119568025..119568041,+
|short_description=p2@Itpka
|description=CAGE_peak_2_at_Itpka_5end
|association_with_transcript=-31bp_to_ENSMUST00000028758,NM_14612...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=228550 | |EntrezGene=228550 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R071 | |UniProt=Q8R071 | ||
|association_with_transcript=-31bp_to_ENSMUST00000028758,NM_146125,uc008luf.1_5end | |||
|cluster_id=chr2:119568025..119568041,+ | |||
|description=CAGE_peak_2_at_Itpka_5end | |||
|id=chr2:119568025..119568041,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.52e-09,9;CL:0002251,5.52e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.53e-13!43;UBERON:0005409!8.58e-12!59;UBERON:0000344!2.26e-09!15;UBERON:0001242!2.01e-08!13;UBERON:0000060!2.01e-08!13;UBERON:0001262!2.01e-08!13;UBERON:0004786!2.01e-08!13;UBERON:0002021!4.14e-08!10;UBERON:0000411!4.14e-08!10;UBERON:0001950!4.14e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.83e-13,15;UBERON:0000160,6.79e-13,31;UBERON:0001242,7.46e-12,13;UBERON:0001262,7.46e-12,13;UBERON:0004786,7.46e-12,13;UBERON:0002021,2.20e-11,10;UBERON:0000411,2.20e-11,10;UBERON:0001950,2.20e-11,10;UBERON:0003350,5.52e-09,9;UBERON:0004808,5.52e-09,9;UBERON:0001277,5.52e-09,9;UBERON:0005409,1.06e-08,47;UBERON:0004923,1.75e-07,24;UBERON:0003528,3.29e-07,29;UBERON:0002791,3.29e-07,29;UBERON:0001893,3.29e-07,29;UBERON:0000485,8.16e-07,11 | |||
|phase1_expression=0,4.88565570695105,5.0049916332849,12.40103266358,14.5259761684441,2.85394762250213,3.97141489012394,0.258246646883153,0.140788722151667,0.70219357896598,0,0,0.171200729931206,0,0,0,0,0,0.137114433605739,1.27316895539409,2.8064285749853,0.496454756004426,0.522399578277871,2.23989391910769,3.67054849707472,3.44539178469012,1.7230479846363,4.95583835177545,6.27077284206034,7.05684363327806,2.43903561720835,0,1.23012957516914,0,3.17736781726402,4.65457007003779,3.67504841272264,0,0,0,0,0,0,0,0.202753862439029,0.367093504323363,0.782391344348039,0.436050312760893,0,0.194429899074283,1.1198913730029,0,0,0,0.336093799142464,0.257259436035947,0,0,0,0,0,0.338844532069132,1.77858959222228,0,0,0,0,0.768436610643109,0.103689612308478,0,0,1.42825492201902,0.662605622854841,0,0.287536413054709,0,2.20231761998777,2.042997409363,1.53606533256243,0,0.0914876436024097,0,2.23346399201105,3.37657566019008,3.66715794664344,0,0.284743361598206,0,0,0.0755715601067855,0,0,1.3599426674155,2.69851595818909,0,0,2.38755514223978,0,0,0,0.14084341977668,0,0,0,0,0,0.505524445014783,1.25602267690966,0,0.593768556259299,0.520455980298408,0.913396434936424,0.230615497256059,1.05505848386836,0.23517741427141,0.628332956648377,0.741584903203122,1.73519228303894,0,0,0.220841518460394,0,3.72783522436244,3.22058876712702,1.46612694769419,3.57639877292028,0.239630249011841,0,0,1.04853447583376,10.980014467647,2.01046963380583,15.9918374576894,17.6443665557928,2.0778804455956,7.94982189032012,0.305518091550949,0.373220911830279,0.505445516867349,0.420883711772948,0.520481771850815,0.689706313300419,0.360124259610698,1.05493372485001,0.340182495756639,0.12811372028485,0.468508622798644,0,0,0,0,0,0.278047249225598,0,0.61734640922383,0.59710280045548,0,0,0,0.414251545071004,0.703578179943289,0.540186184383045,0.946978942340841,0.590292695242212,0.462801338662135,0.697601834251224,0.536546802799238,0.467061369468678,0.658239399653922,0,0,0,0.439100230582101,0,15.7717461423095,0.308713837137853,1.98251269790279,2.90895623329899,0.639864751605702,0.232236671860439,1.28867461322093,0.605050573870028,1.55664630691409,0.760902504450237,3.32170343081158,1.4822905925161,1.00534083520108,0.795825888164603,0.974820435595601,1.79763881730844,2.80979464837102,1.39398891278057,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0.246794327843601,0.889357881261447,0.333690211432188,0.196558995113203,1.12431056192427,0.608580364165509,0.482354319504834,1.2731292589071,2.01387296215567,0.324270453550071,2.19649130550465,4.31304619582064,1.86070473834252,1.24815069245824,1.01031551178845,0.717589654087649,1.4473305640901,0.184753190166605,0.189491411770485,0.488894929326078,0,0.469380496577004,0.502518772325447,0.238043640886014,0.780534591431195,0,0,0.478364305972461,0.163863314715738,0.345369963731791,0.578596234326046,0,0,0.983528546038072,0.827810238914197,0.80275294993896,0.117211686592203,0.163934945376675,0.252470927204373,0.631016438832513,0,0.215423397732799,0.238968797952552,0,0.283076530788832,1.21443210502468,1.16902343164525,0.395287777946524,2.89189184779626,0.283880170416537,0,0.651547837414304,0.659880491890142,1.32745138339963,0.242780636154981,1.81394134178851,0.754420319023592,0.885905678642318,0.922305443831782,0.516856586336442,2.18120237686503,0.712994756769443,1.8962205476149,2.10837217149998,1.03135543248187,0.340439605753788,0.18006109403131,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0.23467170806371,4.02480934641258,0,0.32977250588296,0,0.0603129249281559,0.238744688006273,0.164140899745061,2.62332752966866,0.370850604021019,0,0.412773735926445,0.370389054739423,0.188368457004691,0,0.457556346413045,0,0.419854356970974,0.138199973804424,0.954670618015114,0.790839983952838,0.609958401380546,0.540026704109006,1.46361807210128,1.74690050996942,0.539457385539283,0.909188012978695,2.09404753587224,2.20345454596048,0,3.38215763210514,0.747582730219894,1.15820943319968,0.972255941720238,1.54991788173277,1.18269287843545,0.821500670520278,1.69265700297135,0.838874755405687,0.966336483304024,0.864090018773596,0.632022241256357,0.608175645870493,0.102710957164827,0.25984164595559,0.358053391334963,0.198681354781265,0.240390899039938,0.443068581523732,0.100966449948148,0.381034033274999,0.201652370273681,0,0,0.350630706544707,0.226730383615211,0.221985953374065,0,0.167884616364078,0,0,0.183151624267265,0,0,7.90652579663893,17.4923589872727,8.02053718815155,15.8104927756193,22.6077231524312,15.8632718451837,10.8003600037089,13.0593148935024,17.672553950384,16.0505696643064,0.103787347584177,0,0.170733605754134,0.243106717068294,0.209613162627982,0.919217542250071,1.55572709461131,0.618105171716683,0.64183841918363,0.505394423527595,1.52087579934144,0.565879024158229,0.655490552289177,1.02440243847791,1.09127391015665,0.952587382566147,1.27472758539341,0.77163688185482,2.06042950401653,1.47198920134397,2.05721551431249,0.887379030796687,1.43061713968393,0.436039249896986,2.07040636913727,1.18460451048347,0.73171189149109,1.05227884575137,0.407412341537585,2.80571135828869,1.06771516311757,0.985044823755635,2.04615521584845,1.23949472948773,1.15743966588685,1.49886346762768,0.467863216890817,0.429742108096597,0.765153328275374,0.220591419119515,0.695603506861264 | |phase1_expression=0,4.88565570695105,5.0049916332849,12.40103266358,14.5259761684441,2.85394762250213,3.97141489012394,0.258246646883153,0.140788722151667,0.70219357896598,0,0,0.171200729931206,0,0,0,0,0,0.137114433605739,1.27316895539409,2.8064285749853,0.496454756004426,0.522399578277871,2.23989391910769,3.67054849707472,3.44539178469012,1.7230479846363,4.95583835177545,6.27077284206034,7.05684363327806,2.43903561720835,0,1.23012957516914,0,3.17736781726402,4.65457007003779,3.67504841272264,0,0,0,0,0,0,0,0.202753862439029,0.367093504323363,0.782391344348039,0.436050312760893,0,0.194429899074283,1.1198913730029,0,0,0,0.336093799142464,0.257259436035947,0,0,0,0,0,0.338844532069132,1.77858959222228,0,0,0,0,0.768436610643109,0.103689612308478,0,0,1.42825492201902,0.662605622854841,0,0.287536413054709,0,2.20231761998777,2.042997409363,1.53606533256243,0,0.0914876436024097,0,2.23346399201105,3.37657566019008,3.66715794664344,0,0.284743361598206,0,0,0.0755715601067855,0,0,1.3599426674155,2.69851595818909,0,0,2.38755514223978,0,0,0,0.14084341977668,0,0,0,0,0,0.505524445014783,1.25602267690966,0,0.593768556259299,0.520455980298408,0.913396434936424,0.230615497256059,1.05505848386836,0.23517741427141,0.628332956648377,0.741584903203122,1.73519228303894,0,0,0.220841518460394,0,3.72783522436244,3.22058876712702,1.46612694769419,3.57639877292028,0.239630249011841,0,0,1.04853447583376,10.980014467647,2.01046963380583,15.9918374576894,17.6443665557928,2.0778804455956,7.94982189032012,0.305518091550949,0.373220911830279,0.505445516867349,0.420883711772948,0.520481771850815,0.689706313300419,0.360124259610698,1.05493372485001,0.340182495756639,0.12811372028485,0.468508622798644,0,0,0,0,0,0.278047249225598,0,0.61734640922383,0.59710280045548,0,0,0,0.414251545071004,0.703578179943289,0.540186184383045,0.946978942340841,0.590292695242212,0.462801338662135,0.697601834251224,0.536546802799238,0.467061369468678,0.658239399653922,0,0,0,0.439100230582101,0,15.7717461423095,0.308713837137853,1.98251269790279,2.90895623329899,0.639864751605702,0.232236671860439,1.28867461322093,0.605050573870028,1.55664630691409,0.760902504450237,3.32170343081158,1.4822905925161,1.00534083520108,0.795825888164603,0.974820435595601,1.79763881730844,2.80979464837102,1.39398891278057,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0.246794327843601,0.889357881261447,0.333690211432188,0.196558995113203,1.12431056192427,0.608580364165509,0.482354319504834,1.2731292589071,2.01387296215567,0.324270453550071,2.19649130550465,4.31304619582064,1.86070473834252,1.24815069245824,1.01031551178845,0.717589654087649,1.4473305640901,0.184753190166605,0.189491411770485,0.488894929326078,0,0.469380496577004,0.502518772325447,0.238043640886014,0.780534591431195,0,0,0.478364305972461,0.163863314715738,0.345369963731791,0.578596234326046,0,0,0.983528546038072,0.827810238914197,0.80275294993896,0.117211686592203,0.163934945376675,0.252470927204373,0.631016438832513,0,0.215423397732799,0.238968797952552,0,0.283076530788832,1.21443210502468,1.16902343164525,0.395287777946524,2.89189184779626,0.283880170416537,0,0.651547837414304,0.659880491890142,1.32745138339963,0.242780636154981,1.81394134178851,0.754420319023592,0.885905678642318,0.922305443831782,0.516856586336442,2.18120237686503,0.712994756769443,1.8962205476149,2.10837217149998,1.03135543248187,0.340439605753788,0.18006109403131,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0.23467170806371,4.02480934641258,0,0.32977250588296,0,0.0603129249281559,0.238744688006273,0.164140899745061,2.62332752966866,0.370850604021019,0,0.412773735926445,0.370389054739423,0.188368457004691,0,0.457556346413045,0,0.419854356970974,0.138199973804424,0.954670618015114,0.790839983952838,0.609958401380546,0.540026704109006,1.46361807210128,1.74690050996942,0.539457385539283,0.909188012978695,2.09404753587224,2.20345454596048,0,3.38215763210514,0.747582730219894,1.15820943319968,0.972255941720238,1.54991788173277,1.18269287843545,0.821500670520278,1.69265700297135,0.838874755405687,0.966336483304024,0.864090018773596,0.632022241256357,0.608175645870493,0.102710957164827,0.25984164595559,0.358053391334963,0.198681354781265,0.240390899039938,0.443068581523732,0.100966449948148,0.381034033274999,0.201652370273681,0,0,0.350630706544707,0.226730383615211,0.221985953374065,0,0.167884616364078,0,0,0.183151624267265,0,0,7.90652579663893,17.4923589872727,8.02053718815155,15.8104927756193,22.6077231524312,15.8632718451837,10.8003600037089,13.0593148935024,17.672553950384,16.0505696643064,0.103787347584177,0,0.170733605754134,0.243106717068294,0.209613162627982,0.919217542250071,1.55572709461131,0.618105171716683,0.64183841918363,0.505394423527595,1.52087579934144,0.565879024158229,0.655490552289177,1.02440243847791,1.09127391015665,0.952587382566147,1.27472758539341,0.77163688185482,2.06042950401653,1.47198920134397,2.05721551431249,0.887379030796687,1.43061713968393,0.436039249896986,2.07040636913727,1.18460451048347,0.73171189149109,1.05227884575137,0.407412341537585,2.80571135828869,1.06771516311757,0.985044823755635,2.04615521584845,1.23949472948773,1.15743966588685,1.49886346762768,0.467863216890817,0.429742108096597,0.765153328275374,0.220591419119515,0.695603506861264 | ||
|short_description=p2@Itpka | |||
}} | }} |
Latest revision as of 14:15, 25 September 2015
Short description: | p2@Itpka |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Itpka_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -31bp_to_ENSMUST00000028758, NM_146125, uc008luf.1_5end |
EntrezGene: | Itpka |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.52e-09 | 9 |
epithelial cell of alimentary canal | 5.52e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.83e-13 | 15 |
intestine | 6.79e-13 | 31 |
intestinal mucosa | 7.46e-12 | 13 |
wall of intestine | 7.46e-12 | 13 |
gastrointestinal system mucosa | 7.46e-12 | 13 |
occipital lobe | 2.20e-11 | 10 |
visual cortex | 2.20e-11 | 10 |
neocortex | 2.20e-11 | 10 |
epithelium of mucosa | 5.52e-09 | 9 |
gastrointestinal system epithelium | 5.52e-09 | 9 |
intestinal epithelium | 5.52e-09 | 9 |
gastrointestinal system | 1.06e-08 | 47 |
organ component layer | 1.75e-07 | 24 |
brain grey matter | 3.29e-07 | 29 |
regional part of telencephalon | 3.29e-07 | 29 |
telencephalon | 3.29e-07 | 29 |
simple columnar epithelium | 8.16e-07 | 11 |