FFCP PHASE1:Mm9::chr2:122124454..122124473,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=214593 | |EntrezGene=214593 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |MCL_coexpression_id=58 | ||
|TSSclassifier=NA | |||
|UniProt=E9PX44 | |UniProt=E9PX44 | ||
|association_with_transcript=-269bp_to_ENSMUST00000089855_5end | |association_with_transcript=-269bp_to_ENSMUST00000089855_5end | ||
|cluster_id=chr2:122124454..122124473,- | |||
|description=CAGE_peak_1_at_Duox2_5end | |description=CAGE_peak_1_at_Duox2_5end | ||
|id=chr2:122124454..122124473,- | |id=chr2:122124454..122124473,- | ||
|ontology_enrichment_celltype=CL:0002563!2.81e-08!9;CL:0002251!2.81e-08!9 | |ontology_enrichment_celltype=CL:0002563!2.81e-08!9;CL:0002251!2.81e-08!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.97e-15,9;CL:0002251,1.97e-15,9;CL:0000239,1.52e-11,6;CL:0000677,1.52e-11,6;CL:0000584,1.52e-11,6;CL:0000066,2.23e-11,25;CL:0000075,9.43e-10,7;CL:0000223,1.36e-08,20;CL:0002076,1.86e-08,15;CL:0000682,4.98e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!5.97e-16!59;UBERON:0000344!2.84e-13!15;UBERON:0000160!3.28e-12!43;UBERON:0001242!1.60e-11!13;UBERON:0000060!1.60e-11!13;UBERON:0001262!1.60e-11!13;UBERON:0004786!1.60e-11!13;UBERON:0001007!6.02e-11!128;UBERON:0001555!6.02e-11!128;UBERON:0007026!6.02e-11!128;UBERON:0004119!2.01e-10!130;UBERON:0000925!2.01e-10!130;UBERON:0006595!2.01e-10!130;UBERON:0004921!7.32e-10!126;UBERON:0004185!7.32e-10!126;UBERON:0004923!6.57e-09!24;UBERON:0003350!2.81e-08!9;UBERON:0004808!2.81e-08!9;UBERON:0001277!2.81e-08!9 | |ontology_enrichment_uberon=UBERON:0005409!5.97e-16!59;UBERON:0000344!2.84e-13!15;UBERON:0000160!3.28e-12!43;UBERON:0001242!1.60e-11!13;UBERON:0000060!1.60e-11!13;UBERON:0001262!1.60e-11!13;UBERON:0004786!1.60e-11!13;UBERON:0001007!6.02e-11!128;UBERON:0001555!6.02e-11!128;UBERON:0007026!6.02e-11!128;UBERON:0004119!2.01e-10!130;UBERON:0000925!2.01e-10!130;UBERON:0006595!2.01e-10!130;UBERON:0004921!7.32e-10!126;UBERON:0004185!7.32e-10!126;UBERON:0004923!6.57e-09!24;UBERON:0003350!2.81e-08!9;UBERON:0004808!2.81e-08!9;UBERON:0001277!2.81e-08!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,7.23e-32,47;UBERON:0000160,6.02e-28,31;UBERON:0000344,9.24e-26,15;UBERON:0001242,3.91e-22,13;UBERON:0001262,3.91e-22,13;UBERON:0004786,3.91e-22,13;UBERON:0003350,1.97e-15,9;UBERON:0004808,1.97e-15,9;UBERON:0001277,1.97e-15,9;UBERON:0004923,1.63e-14,24;UBERON:0001007,3.58e-14,116;UBERON:0001555,3.58e-14,116;UBERON:0007026,3.58e-14,116;UBERON:0004119,9.16e-14,118;UBERON:0000925,9.16e-14,118;UBERON:0006595,9.16e-14,118;UBERON:0004921,2.54e-12,114;UBERON:0000485,2.97e-12,11;UBERON:0002108,6.09e-08,4;UBERON:0000331,8.73e-07,3;UBERON:0002116,8.73e-07,3;UBERON:0001204,8.73e-07,3;UBERON:0001168,8.73e-07,3 | |||
|phase1_expression=0,214.270900290568,162.434728462064,28.7341000741489,28.5510566069418,59.7650208006328,93.2114435976147,0,0.422366166455,1.17032263160997,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,111.834703532591,131.910336613623,189.496548157957,126.644026870768,136.82423275554,102.232599667529,58.7230202340639,188.91439507832,0,0,0,15.0202842270663,6.4831511689812,4.90006455029686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0,0,0,2.89864488701678,0,1.3599426674155,0,0,0,4.91555470461132,0,0,0,0,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,7.30776830201984,0.258937883647172,0,0,0,0,0,0,0.125666591329675,0.247194967734374,1.15679485535929,0,0,0,0,46.5979403045305,0,0,101.416450917811,0,0,0,0,0,0,0,0.255715457330331,0,0,0.101839363850316,0.124406970610093,0,0.210441855886474,0,0,0,0,0.136072998302656,0.12811372028485,0,0,0,0,0,0,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0.116765342367169,0.329119699826961,0,0.0810688095458557,0.438599962275997,0.658650345873152,0.671032093801859,0,0,24.4509899408011,30.147364599644,0,0,0,0,0.667134131534611,0.570676878337677,19.9302205848695,0.658795818896044,1.25667604400135,3.58121649674071,2.14460495831032,30.5598598942435,27.4495323340862,20.1132685986911,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0,0,0.505157755894224,0.179397413521912,0,0.184753190166605,0,0,0,0,0,0,0.390267295715598,0.472905432318573,0.221464689648775,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.659880491890142,1.32745138339963,0,0,0,0,0,0.258428293168221,0.363533729477506,0,1.26414703174326,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0.304464949114599,0,0,0.220528398054962,0.65954501176592,0.161464426695906,0,0.119372344003136,0.164140899745061,2.33184669303881,0,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0,0,0,61.0989195529673,0,0.203319467126849,1.83609079397062,12.9634743528971,33.8461973806575,42.0776760720641,40.9134605840413,46.5925576731573,4.66613903850454,59.6485740563449,0,0.149516546043979,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0.147689527174577,0.302899349844443,0,0.201652370273681,0,0.192423683280659,0,0.226730383615211,30.4120756122469,10.8553766497466,10.744615447301,0.772758376128762,0.187682475451182,0.549454872801795,2.14368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666740183404846,0.206035057238894,0,0.252697211763798,0.50695859978048,0,0.280924522409647,0.384150914429216,0.287177344778066,0,0.115884325944855,0.578727661391115,0,0.441596760403192,1.02860775715625,0.177475806159338,0.476872379894642,0.290692833264657,0.282328141245992,0.338458431566706,0.182927972872773,0.789209134313529,0.271608227691724,1.12228454331548,0.237270036248348,0.492522411877817,0.409231043169689,0.464810523557898,0,0,1.16965804222704,1.07435527024149,0,0,0 | |phase1_expression=0,214.270900290568,162.434728462064,28.7341000741489,28.5510566069418,59.7650208006328,93.2114435976147,0,0.422366166455,1.17032263160997,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,111.834703532591,131.910336613623,189.496548157957,126.644026870768,136.82423275554,102.232599667529,58.7230202340639,188.91439507832,0,0,0,15.0202842270663,6.4831511689812,4.90006455029686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0,0,0,2.89864488701678,0,1.3599426674155,0,0,0,4.91555470461132,0,0,0,0,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,7.30776830201984,0.258937883647172,0,0,0,0,0,0,0.125666591329675,0.247194967734374,1.15679485535929,0,0,0,0,46.5979403045305,0,0,101.416450917811,0,0,0,0,0,0,0,0.255715457330331,0,0,0.101839363850316,0.124406970610093,0,0.210441855886474,0,0,0,0,0.136072998302656,0.12811372028485,0,0,0,0,0,0,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0.116765342367169,0.329119699826961,0,0.0810688095458557,0.438599962275997,0.658650345873152,0.671032093801859,0,0,24.4509899408011,30.147364599644,0,0,0,0,0.667134131534611,0.570676878337677,19.9302205848695,0.658795818896044,1.25667604400135,3.58121649674071,2.14460495831032,30.5598598942435,27.4495323340862,20.1132685986911,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0,0,0.505157755894224,0.179397413521912,0,0.184753190166605,0,0,0,0,0,0,0.390267295715598,0.472905432318573,0.221464689648775,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.659880491890142,1.32745138339963,0,0,0,0,0,0.258428293168221,0.363533729477506,0,1.26414703174326,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0.304464949114599,0,0,0.220528398054962,0.65954501176592,0.161464426695906,0,0.119372344003136,0.164140899745061,2.33184669303881,0,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0,0,0,61.0989195529673,0,0.203319467126849,1.83609079397062,12.9634743528971,33.8461973806575,42.0776760720641,40.9134605840413,46.5925576731573,4.66613903850454,59.6485740563449,0,0.149516546043979,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0.147689527174577,0.302899349844443,0,0.201652370273681,0,0.192423683280659,0,0.226730383615211,30.4120756122469,10.8553766497466,10.744615447301,0.772758376128762,0.187682475451182,0.549454872801795,2.14368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666740183404846,0.206035057238894,0,0.252697211763798,0.50695859978048,0,0.280924522409647,0.384150914429216,0.287177344778066,0,0.115884325944855,0.578727661391115,0,0.441596760403192,1.02860775715625,0.177475806159338,0.476872379894642,0.290692833264657,0.282328141245992,0.338458431566706,0.182927972872773,0.789209134313529,0.271608227691724,1.12228454331548,0.237270036248348,0.492522411877817,0.409231043169689,0.464810523557898,0,0,1.16965804222704,1.07435527024149,0,0,0 | ||
|short_description=p1@Duox2 | |short_description=p1@Duox2 | ||
}} | }} |
Latest revision as of 15:21, 25 September 2015
Short description: | p1@Duox2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Duox2_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | -269bp_to_ENSMUST00000089855_5end |
EntrezGene: | Duox2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.97e-15 | 9 |
epithelial cell of alimentary canal | 1.97e-15 | 9 |
brush border epithelial cell | 1.52e-11 | 6 |
gut absorptive cell | 1.52e-11 | 6 |
enterocyte | 1.52e-11 | 6 |
epithelial cell | 2.23e-11 | 25 |
columnar/cuboidal epithelial cell | 9.43e-10 | 7 |
endodermal cell | 1.36e-08 | 20 |
endo-epithelial cell | 1.86e-08 | 15 |
M cell of gut | 4.98e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 7.23e-32 | 47 |
intestine | 6.02e-28 | 31 |
mucosa | 9.24e-26 | 15 |
intestinal mucosa | 3.91e-22 | 13 |
wall of intestine | 3.91e-22 | 13 |
gastrointestinal system mucosa | 3.91e-22 | 13 |
epithelium of mucosa | 1.97e-15 | 9 |
gastrointestinal system epithelium | 1.97e-15 | 9 |
intestinal epithelium | 1.97e-15 | 9 |
organ component layer | 1.63e-14 | 24 |
digestive system | 3.58e-14 | 116 |
digestive tract | 3.58e-14 | 116 |
primitive gut | 3.58e-14 | 116 |
endoderm-derived structure | 9.16e-14 | 118 |
endoderm | 9.16e-14 | 118 |
presumptive endoderm | 9.16e-14 | 118 |
subdivision of digestive tract | 2.54e-12 | 114 |
simple columnar epithelium | 2.97e-12 | 11 |
small intestine | 6.09e-08 | 4 |
ileal mucosa | 8.73e-07 | 3 |
ileum | 8.73e-07 | 3 |
mucosa of small intestine | 8.73e-07 | 3 |
wall of small intestine | 8.73e-07 | 3 |