FFCP PHASE1:Mm9::chr2:122124634..122124639,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66811 | |EntrezGene=66811 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1573 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D311 | |UniProt=Q9D311 | ||
|association_with_transcript=0bp_to_ENSMUST00000028656,NM_025777,uc008mam.1_5end | |association_with_transcript=0bp_to_ENSMUST00000028656,NM_025777,uc008mam.1_5end | ||
|cluster_id=chr2:122124634..122124639,+ | |||
|description=CAGE_peak_1_at_Duoxa2_5end | |description=CAGE_peak_1_at_Duoxa2_5end | ||
|id=chr2:122124634..122124639,+ | |id=chr2:122124634..122124639,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.57e-08!9;CL:0002251!2.57e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.36e-16,9;CL:0002251,1.36e-16,9;CL:0000239,4.56e-12,6;CL:0000677,4.56e-12,6;CL:0000584,4.56e-12,6;CL:0000066,3.11e-11,25;CL:0000075,3.05e-10,7;CL:0002076,2.67e-09,15;CL:0000223,4.75e-08,20;CL:0000682,7.19e-08,3;CL:0000349,2.19e-07,3;CL:0000351,2.19e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.98e-14!15;UBERON:0001242!5.33e-12!13;UBERON:0000060!5.33e-12!13;UBERON:0001262!5.33e-12!13;UBERON:0004786!5.33e-12!13;UBERON:0004119!2.44e-10!130;UBERON:0000925!2.44e-10!130;UBERON:0006595!2.44e-10!130;UBERON:0005409!4.60e-10!59;UBERON:0001007!1.09e-09!128;UBERON:0001555!1.09e-09!128;UBERON:0007026!1.09e-09!128;UBERON:0004921!1.37e-08!126;UBERON:0004185!1.37e-08!126;UBERON:0004923!1.84e-08!24;UBERON:0003350!2.57e-08!9;UBERON:0004808!2.57e-08!9;UBERON:0001277!2.57e-08!9;UBERON:0000160!3.45e-08!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.31e-29,47;UBERON:0000344,2.45e-29,15;UBERON:0000160,3.39e-25,31;UBERON:0001242,8.40e-25,13;UBERON:0001262,8.40e-25,13;UBERON:0004786,8.40e-25,13;UBERON:0004923,5.97e-17,24;UBERON:0003350,1.36e-16,9;UBERON:0004808,1.36e-16,9;UBERON:0001277,1.36e-16,9;UBERON:0001007,4.39e-15,116;UBERON:0001555,4.39e-15,116;UBERON:0007026,4.39e-15,116;UBERON:0004119,1.08e-14,118;UBERON:0000925,1.08e-14,118;UBERON:0006595,1.08e-14,118;UBERON:0000485,2.82e-13,11;UBERON:0004921,6.33e-13,114;UBERON:0002108,2.84e-09,4;UBERON:0000331,7.19e-08,3;UBERON:0002116,7.19e-08,3;UBERON:0001204,7.19e-08,3;UBERON:0001168,7.19e-08,3;UBERON:0000358,2.19e-07,3;UBERON:0000307,2.19e-07,3;UBERON:0007010,2.19e-07,3 | |||
|phase1_expression=0,26.5221309805914,23.6599604482559,2.11724947914781,3.00537437967808,12.4230661214798,39.9477615418349,0,2.53419699873,2.34064526321993,0,0,0,0.174840804837995,0,0,0,0,0,0,0.0850432901510698,0,0,89.7557491871011,178.709829951325,41.9189333803965,68.921919385452,66.1496684345679,70.6887120377711,22.6827116783938,322.174431982158,0,0,0,2.88851619751275,1.66234645358492,2.6542016314108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,2.66844398250329,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,3.76806803072898,0.258937883647172,0,0,0,0,0,0.117588707135705,0,0,0.722996784599558,0,0,0.220841518460394,0,65.2371164263428,0,0,96.0518527584304,0.11981512450592,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0.43839146485515,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0,0,0.164167464079095,0.162137619091711,0,0.219550115291051,0,0,0,24.7814087237848,3.17340679996253,0,0,0,0,0,0,7.59246498471219,0,0.502670417600539,0.994782360205754,0.974820435595601,8.08937467788799,16.2103537406021,8.56307474993779,0,0,0,0,0,0,0,0.147610147979602,0,0,0.889357881261447,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0,0,0,0,0,0.335012514883631,0,0,0.945810864637146,0.44292937929755,0.797273843287435,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0.23467170806371,0.21183207086382,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0.328281799490123,1.7488850197791,0,0,0,0,0,0,0,0,0,0.138199973804424,171.84071124272,0,0,0.972048067396211,7.94535524854981,27.2953204682722,53.0016881292345,30.499125162649,50.2571408609337,3.36998930558661,46.6004484815194,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0,0,0,0.241584120826006,0,0,0,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0.504832249740738,0.0762068066549998,0.100826185136841,0,0,0,0.453460767230423,44.1752047214389,40.4609493308735,19.8103847309613,0.19318959403219,0.375364950902364,0.36630324853453,3.21552568618599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.754505365544305,0,0.256100609619477,0.229741875822453,0.476293691283074,0.231768651889711,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0.818462086339379,0.309873682371932,0.385813221962283,0.249810577937946,0.935726433781634,0.429742108096597,0,0,0 | |phase1_expression=0,26.5221309805914,23.6599604482559,2.11724947914781,3.00537437967808,12.4230661214798,39.9477615418349,0,2.53419699873,2.34064526321993,0,0,0,0.174840804837995,0,0,0,0,0,0,0.0850432901510698,0,0,89.7557491871011,178.709829951325,41.9189333803965,68.921919385452,66.1496684345679,70.6887120377711,22.6827116783938,322.174431982158,0,0,0,2.88851619751275,1.66234645358492,2.6542016314108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,2.66844398250329,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,3.76806803072898,0.258937883647172,0,0,0,0,0,0.117588707135705,0,0,0.722996784599558,0,0,0.220841518460394,0,65.2371164263428,0,0,96.0518527584304,0.11981512450592,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0.43839146485515,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0,0,0.164167464079095,0.162137619091711,0,0.219550115291051,0,0,0,24.7814087237848,3.17340679996253,0,0,0,0,0,0,7.59246498471219,0,0.502670417600539,0.994782360205754,0.974820435595601,8.08937467788799,16.2103537406021,8.56307474993779,0,0,0,0,0,0,0,0.147610147979602,0,0,0.889357881261447,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0,0,0,0,0,0.335012514883631,0,0,0.945810864637146,0.44292937929755,0.797273843287435,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0.23467170806371,0.21183207086382,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0.328281799490123,1.7488850197791,0,0,0,0,0,0,0,0,0,0.138199973804424,171.84071124272,0,0,0.972048067396211,7.94535524854981,27.2953204682722,53.0016881292345,30.499125162649,50.2571408609337,3.36998930558661,46.6004484815194,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0,0,0,0.241584120826006,0,0,0,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0.504832249740738,0.0762068066549998,0.100826185136841,0,0,0,0.453460767230423,44.1752047214389,40.4609493308735,19.8103847309613,0.19318959403219,0.375364950902364,0.36630324853453,3.21552568618599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.754505365544305,0,0.256100609619477,0.229741875822453,0.476293691283074,0.231768651889711,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0.818462086339379,0.309873682371932,0.385813221962283,0.249810577937946,0.935726433781634,0.429742108096597,0,0,0 | ||
|short_description=p1@Duoxa2 | |short_description=p1@Duoxa2 | ||
}} | }} |
Latest revision as of 15:21, 25 September 2015
Short description: | p1@Duoxa2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Duoxa2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1573 |
Association with transcript: | 0bp_to_ENSMUST00000028656, NM_025777, uc008mam.1_5end |
EntrezGene: | Duoxa2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.36e-16 | 9 |
epithelial cell of alimentary canal | 1.36e-16 | 9 |
brush border epithelial cell | 4.56e-12 | 6 |
gut absorptive cell | 4.56e-12 | 6 |
enterocyte | 4.56e-12 | 6 |
epithelial cell | 3.11e-11 | 25 |
columnar/cuboidal epithelial cell | 3.05e-10 | 7 |
endo-epithelial cell | 2.67e-09 | 15 |
endodermal cell | 4.75e-08 | 20 |
M cell of gut | 7.19e-08 | 3 |
extraembryonic cell | 2.19e-07 | 3 |
trophoblast cell | 2.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.31e-29 | 47 |
mucosa | 2.45e-29 | 15 |
intestine | 3.39e-25 | 31 |
intestinal mucosa | 8.40e-25 | 13 |
wall of intestine | 8.40e-25 | 13 |
gastrointestinal system mucosa | 8.40e-25 | 13 |
organ component layer | 5.97e-17 | 24 |
epithelium of mucosa | 1.36e-16 | 9 |
gastrointestinal system epithelium | 1.36e-16 | 9 |
intestinal epithelium | 1.36e-16 | 9 |
digestive system | 4.39e-15 | 116 |
digestive tract | 4.39e-15 | 116 |
primitive gut | 4.39e-15 | 116 |
endoderm-derived structure | 1.08e-14 | 118 |
endoderm | 1.08e-14 | 118 |
presumptive endoderm | 1.08e-14 | 118 |
simple columnar epithelium | 2.82e-13 | 11 |
subdivision of digestive tract | 6.33e-13 | 114 |
small intestine | 2.84e-09 | 4 |
ileal mucosa | 7.19e-08 | 3 |
ileum | 7.19e-08 | 3 |
mucosa of small intestine | 7.19e-08 | 3 |
wall of small intestine | 7.19e-08 | 3 |
blastocyst | 2.19e-07 | 3 |
blastula | 2.19e-07 | 3 |
cleaving embryo | 2.19e-07 | 3 |