Personal tools

FFCP PHASE1:Mm9::chr19:3575708..3575756,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr19:3575708..3575756,-
|DHSsupport=NA
|short_description=p1@Ppp6r3
|DPIdataset=NA
|description=CAGE_peak_1_at_Ppp6r3_5end
|association_with_transcript=0bp_to_ENSMUST00000025846,ENSMUST00000113997,ENSMUST00000172362,NM_001164159,NM_028999,NM_029456,uc008fwk.2,uc008fwl.2,uc008fwm.2,uc008fwo.2,uc008fwp.2,uc012bfw.1_5end
|EntrezGene=52036
|EntrezGene=52036
|HGNC=
|HGNC=
|MCL_coexpression_id=614
|TSSclassifier=NA
|UniProt=Q922D4,G5E8R4
|UniProt=Q922D4,G5E8R4
|association_with_transcript=0bp_to_ENSMUST00000025846,ENSMUST00000113997,ENSMUST00000172362,NM_001164159,NM_028999,NM_029456,uc008fwk.2,uc008fwl.2,uc008fwm.2,uc008fwo.2,uc008fwp.2,uc012bfw.1_5end
|cluster_id=chr19:3575708..3575756,-
|description=CAGE_peak_1_at_Ppp6r3_5end
|id=chr19:3575708..3575756,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001048!2.94e-10!147;UBERON:0001004!5.18e-08!42;UBERON:0000065!5.91e-08!41;UBERON:0000926!2.62e-07!193;UBERON:0004120!2.62e-07!193;UBERON:0006603!2.62e-07!193;UBERON:0004921!5.65e-07!126;UBERON:0004185!5.65e-07!126;UBERON:0001007!6.90e-07!128;UBERON:0001555!6.90e-07!128;UBERON:0007026!6.90e-07!128;UBERON:0004119!7.16e-07!130;UBERON:0000925!7.16e-07!130;UBERON:0006595!7.16e-07!130
|ontology_enrichment_uberon_v019_2=UBERON:0001048,2.17e-11,134;UBERON:0004921,2.11e-08,114;UBERON:0001007,2.77e-08,116;UBERON:0001555,2.77e-08,116;UBERON:0007026,2.77e-08,116;UBERON:0004119,3.01e-08,118;UBERON:0000925,3.01e-08,118;UBERON:0006595,3.01e-08,118;UBERON:0001004,5.18e-08,42;UBERON:0000065,5.91e-08,41;UBERON:0000153,1.45e-07,43
|phase1_expression=56.0520964866779,68.3991798973148,59.1499011206397,89.8318707581285,97.1737716095914,47.6777132229767,59.8048359924546,84.4466535307909,118.966470218158,115.159746950421,68.487187290202,70.0399555979054,107.514058396797,100.183781172171,62.6246352213446,85.8495133732862,95.8399773035561,93.3768009460384,112.022492255889,93.7901130473647,68.9701083125176,68.5107563286109,84.1063321027372,77.4363326320088,65.3816451041435,51.6808767703518,64.1835374277021,61.1938300827925,71.638829135053,95.2673890492538,53.2153225572731,34.9266870402797,38.1340168302433,63.3926724061755,56.0372142317473,50.3690975436232,48.3881374341815,106.725565837911,72.6641870407134,107.322367514629,105.881667845583,122.265141807562,97.5875809592619,66.9771071630071,65.3881206365869,44.6018607752886,10.1710874765245,12.4274339136855,13.6205433295373,23.9148775861369,16.0984384869167,8.62515386189829,107.380867876951,108.804321301702,100.155952144454,45.5349201783626,46.4184172700786,51.0515371354668,30.1451526680801,38.0873505075864,31.0577387718028,10.8430250262122,10.6715375533337,9.44894703145469,9.88866362566974,11.3676818391376,8.38880309451533,13.831858991576,58.8956997912153,39.1517221161903,46.271491497304,15.1395021734016,21.8659855542097,53.40598845772,44.6639894944981,54.2339084099912,41.8440347797677,45.4566923583268,43.7778619780294,29.0149833006426,40.0715878978554,48.4449434617787,30.4309468911505,42.7699583624077,40.9499304041851,47.4352022612605,67.6265483795739,43.2446714314697,55.5072997132239,53.8825223561381,109.858641217936,39.5794983411438,30.5987100168488,51.8115063972304,55.2309954830519,52.4191457903883,66.0088774619234,62.8887890313033,46.5016948239135,35.6872970255444,53.802186354692,73.1460921261612,15.2883143823987,7.11066703153331,35.2880396848279,42.8178172652917,46.0027244963453,57.09193985953,167.014934952426,80.3071972340702,52.5660540101392,63.6332849672375,53.9640263579177,65.5643486403908,87.1332319875573,55.7959665503759,117.417609673828,93.5557839271828,106.153266233985,66.3244084784378,70.6692859073259,66.4279096795254,132.338150464867,101.302155765995,97.3927186682566,99.1173374209335,88.663192134381,54.5911485204001,76.3692064709119,65.907881338122,58.1025765579656,62.4502130000936,62.7505795894118,58.814555185976,60.6741090113916,54.3508231276988,67.8250163243107,75.5150311603265,73.5423227041993,88.1751376164326,82.105999509466,65.5220997635398,83.008641840266,84.5454028058361,91.9173103534439,111.458936647819,86.9552003914283,94.6854336904797,86.0116291802041,116.489345383377,96.5971671660079,67.7314813201206,102.877482213471,81.491006966187,85.6053687457045,71.851370321476,56.879268172372,63.3075851502199,58.8218443748877,85.7500698296978,79.9733864535538,75.9861899365483,103.694194186322,90.9050750673006,93.3316032968638,87.8978311156542,81.2868406240846,98.1996529307895,75.368411260374,93.082952132847,95.9854705022932,99.2697914618006,95.0651999210249,98.7759242076336,67.9236533862131,66.579284209397,98.4647973291718,86.2108847323154,77.6369231948252,94.288088775338,94.4598491490944,92.7744213267376,86.2826810118097,70.763932913872,87.3133473241901,91.243220917102,80.9299372336868,82.9648488411599,81.3000243286731,100.667773769273,92.5070853463691,93.1981158830439,43.8132851201619,76.4322549359086,87.9120338250027,81.4605311381257,79.3265672515589,74.8349198229699,78.0338868113335,78.6762088731279,80.854344838308,71.9405465664097,59.5869780445169,77.4161290522676,67.2231763287154,85.4476027062444,75.4639651565231,86.1002460316128,70.7859867952347,79.9795262113254,89.3365099530445,67.26754623108,79.072513590045,93.4073778647944,76.7612675861819,79.5623465533402,68.8886067924143,68.0245365122348,96.4411652669676,75.9860561199644,102.17904022915,81.1381510005399,91.5291968325158,115.746823892295,102.596809221872,94.2495519153168,110.975141450758,106.081586341763,95.1944968885198,89.9609597789402,86.5151759148137,102.700831592873,70.871903451458,59.8296252200581,81.141105048141,81.1254034135914,56.8349088556783,59.426325102247,51.3116379028994,89.374708230348,66.8877425162464,84.3347687680739,69.581757467694,77.4258905366269,77.9795359288379,61.7106837119655,68.817819284732,66.9265914616904,65.6177711391229,99.930929407182,88.0028528291265,38.1060391847926,70.8558273188056,81.9901511173501,75.6647288537788,63.8513073087601,48.6740926713249,58.8447848838402,40.7516612175466,70.4026488791594,69.5172108622515,85.4304264272138,71.655973055329,71.4243072934944,60.0886068877493,71.1635248412489,104.514958966413,80.8474312200583,36.349790142954,69.6595363852675,90.4435191575595,65.639724877562,61.8704317463975,44.1474176216169,57.7292401836727,92.7824470383532,61.7479514553893,81.9484677119156,106.405057192602,88.9615642690299,76.995161882023,79.6083363763547,87.1527701523254,58.9652460393421,74.8414457894595,69.552374503606,80.930008460564,96.4446499864018,98.1464555036961,86.0205931256525,65.6116739776281,61.4386875700859,72.0021863521048,37.2321541025894,77.3441504305876,92.713677009843,76.2517706201917,78.4081110054258,75.3350844924313,74.8497122435755,76.8677138245624,56.5392834685504,87.8789518918356,80.1527713882134,71.5890032128922,93.8963909156187,63.2051433546113,74.0859027590822,70.2629439718857,80.4231157336104,92.1254323369169,74.0862949762076,87.4526932510428,80.930680476712,86.4090018773596,110.919903340491,51.0867542531214,66.8648331143025,82.369801767922,95.7792821821026,127.752111124353,103.969063834773,104.268806185252,122.06843798731,112.709867042745,129.25916934543,122.11472456691,115.742845493316,129.850238323723,93.1861876658519,59.4922355042493,68.9002418760773,53.7230772365051,73.4120457322324,63.8120416534019,72.7111948341042,67.5260394099057,70.7216666689862,58.7341916321749,70.4297611855981,71.6119391799246,58.4300819968538,58.2320141805046,64.9638751755142,62.1020700213261,69.3494652965299,67.9713613476307,60.5779564749629,74.9344649557756,65.0410543643681,82.4643315792468,80.4683233496053,56.5955539095552,47.2477816716536,68.0074987072943,70.6700246329407,60.6537306128531,66.2066694821149,67.4254937708038,78.2799316752216,66.2045457812069,67.9306867015663,66.9123213332895,77.1595779878579,65.3587598328985,66.9394995009057,53.9832530052332,75.218648188677,64.4594194484581,57.1472095833067,66.7621331852499,75.4347902321785,76.3227075168331,59.9917569951986,68.0492059086714,64.7151490137094,66.5440157844723,70.703926228875,61.8088444426947,58.0191401192069,66.7046600366594,67.2425890747092,72.1470725069469,59.4549175492311,73.6884566603036,85.3038084571744,83.9755777782222,75.8834481771133,77.2119892616004
|phase1_expression=56.0520964866779,68.3991798973148,59.1499011206397,89.8318707581285,97.1737716095914,47.6777132229767,59.8048359924546,84.4466535307909,118.966470218158,115.159746950421,68.487187290202,70.0399555979054,107.514058396797,100.183781172171,62.6246352213446,85.8495133732862,95.8399773035561,93.3768009460384,112.022492255889,93.7901130473647,68.9701083125176,68.5107563286109,84.1063321027372,77.4363326320088,65.3816451041435,51.6808767703518,64.1835374277021,61.1938300827925,71.638829135053,95.2673890492538,53.2153225572731,34.9266870402797,38.1340168302433,63.3926724061755,56.0372142317473,50.3690975436232,48.3881374341815,106.725565837911,72.6641870407134,107.322367514629,105.881667845583,122.265141807562,97.5875809592619,66.9771071630071,65.3881206365869,44.6018607752886,10.1710874765245,12.4274339136855,13.6205433295373,23.9148775861369,16.0984384869167,8.62515386189829,107.380867876951,108.804321301702,100.155952144454,45.5349201783626,46.4184172700786,51.0515371354668,30.1451526680801,38.0873505075864,31.0577387718028,10.8430250262122,10.6715375533337,9.44894703145469,9.88866362566974,11.3676818391376,8.38880309451533,13.831858991576,58.8956997912153,39.1517221161903,46.271491497304,15.1395021734016,21.8659855542097,53.40598845772,44.6639894944981,54.2339084099912,41.8440347797677,45.4566923583268,43.7778619780294,29.0149833006426,40.0715878978554,48.4449434617787,30.4309468911505,42.7699583624077,40.9499304041851,47.4352022612605,67.6265483795739,43.2446714314697,55.5072997132239,53.8825223561381,109.858641217936,39.5794983411438,30.5987100168488,51.8115063972304,55.2309954830519,52.4191457903883,66.0088774619234,62.8887890313033,46.5016948239135,35.6872970255444,53.802186354692,73.1460921261612,15.2883143823987,7.11066703153331,35.2880396848279,42.8178172652917,46.0027244963453,57.09193985953,167.014934952426,80.3071972340702,52.5660540101392,63.6332849672375,53.9640263579177,65.5643486403908,87.1332319875573,55.7959665503759,117.417609673828,93.5557839271828,106.153266233985,66.3244084784378,70.6692859073259,66.4279096795254,132.338150464867,101.302155765995,97.3927186682566,99.1173374209335,88.663192134381,54.5911485204001,76.3692064709119,65.907881338122,58.1025765579656,62.4502130000936,62.7505795894118,58.814555185976,60.6741090113916,54.3508231276988,67.8250163243107,75.5150311603265,73.5423227041993,88.1751376164326,82.105999509466,65.5220997635398,83.008641840266,84.5454028058361,91.9173103534439,111.458936647819,86.9552003914283,94.6854336904797,86.0116291802041,116.489345383377,96.5971671660079,67.7314813201206,102.877482213471,81.491006966187,85.6053687457045,71.851370321476,56.879268172372,63.3075851502199,58.8218443748877,85.7500698296978,79.9733864535538,75.9861899365483,103.694194186322,90.9050750673006,93.3316032968638,87.8978311156542,81.2868406240846,98.1996529307895,75.368411260374,93.082952132847,95.9854705022932,99.2697914618006,95.0651999210249,98.7759242076336,67.9236533862131,66.579284209397,98.4647973291718,86.2108847323154,77.6369231948252,94.288088775338,94.4598491490944,92.7744213267376,86.2826810118097,70.763932913872,87.3133473241901,91.243220917102,80.9299372336868,82.9648488411599,81.3000243286731,100.667773769273,92.5070853463691,93.1981158830439,43.8132851201619,76.4322549359086,87.9120338250027,81.4605311381257,79.3265672515589,74.8349198229699,78.0338868113335,78.6762088731279,80.854344838308,71.9405465664097,59.5869780445169,77.4161290522676,67.2231763287154,85.4476027062444,75.4639651565231,86.1002460316128,70.7859867952347,79.9795262113254,89.3365099530445,67.26754623108,79.072513590045,93.4073778647944,76.7612675861819,79.5623465533402,68.8886067924143,68.0245365122348,96.4411652669676,75.9860561199644,102.17904022915,81.1381510005399,91.5291968325158,115.746823892295,102.596809221872,94.2495519153168,110.975141450758,106.081586341763,95.1944968885198,89.9609597789402,86.5151759148137,102.700831592873,70.871903451458,59.8296252200581,81.141105048141,81.1254034135914,56.8349088556783,59.426325102247,51.3116379028994,89.374708230348,66.8877425162464,84.3347687680739,69.581757467694,77.4258905366269,77.9795359288379,61.7106837119655,68.817819284732,66.9265914616904,65.6177711391229,99.930929407182,88.0028528291265,38.1060391847926,70.8558273188056,81.9901511173501,75.6647288537788,63.8513073087601,48.6740926713249,58.8447848838402,40.7516612175466,70.4026488791594,69.5172108622515,85.4304264272138,71.655973055329,71.4243072934944,60.0886068877493,71.1635248412489,104.514958966413,80.8474312200583,36.349790142954,69.6595363852675,90.4435191575595,65.639724877562,61.8704317463975,44.1474176216169,57.7292401836727,92.7824470383532,61.7479514553893,81.9484677119156,106.405057192602,88.9615642690299,76.995161882023,79.6083363763547,87.1527701523254,58.9652460393421,74.8414457894595,69.552374503606,80.930008460564,96.4446499864018,98.1464555036961,86.0205931256525,65.6116739776281,61.4386875700859,72.0021863521048,37.2321541025894,77.3441504305876,92.713677009843,76.2517706201917,78.4081110054258,75.3350844924313,74.8497122435755,76.8677138245624,56.5392834685504,87.8789518918356,80.1527713882134,71.5890032128922,93.8963909156187,63.2051433546113,74.0859027590822,70.2629439718857,80.4231157336104,92.1254323369169,74.0862949762076,87.4526932510428,80.930680476712,86.4090018773596,110.919903340491,51.0867542531214,66.8648331143025,82.369801767922,95.7792821821026,127.752111124353,103.969063834773,104.268806185252,122.06843798731,112.709867042745,129.25916934543,122.11472456691,115.742845493316,129.850238323723,93.1861876658519,59.4922355042493,68.9002418760773,53.7230772365051,73.4120457322324,63.8120416534019,72.7111948341042,67.5260394099057,70.7216666689862,58.7341916321749,70.4297611855981,71.6119391799246,58.4300819968538,58.2320141805046,64.9638751755142,62.1020700213261,69.3494652965299,67.9713613476307,60.5779564749629,74.9344649557756,65.0410543643681,82.4643315792468,80.4683233496053,56.5955539095552,47.2477816716536,68.0074987072943,70.6700246329407,60.6537306128531,66.2066694821149,67.4254937708038,78.2799316752216,66.2045457812069,67.9306867015663,66.9123213332895,77.1595779878579,65.3587598328985,66.9394995009057,53.9832530052332,75.218648188677,64.4594194484581,57.1472095833067,66.7621331852499,75.4347902321785,76.3227075168331,59.9917569951986,68.0492059086714,64.7151490137094,66.5440157844723,70.703926228875,61.8088444426947,58.0191401192069,66.7046600366594,67.2425890747092,72.1470725069469,59.4549175492311,73.6884566603036,85.3038084571744,83.9755777782222,75.8834481771133,77.2119892616004
|short_description=p1@Ppp6r3
}}
}}

Latest revision as of 16:18, 25 September 2015

Short description:p1@Ppp6r3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ppp6r3_5end
Coexpression cluster:MCL_coexpression_mm9:614
Association with transcript: 0bp_to_ENSMUST00000025846, ENSMUST00000113997, ENSMUST00000172362, NM_001164159, NM_028999, NM_029456, uc008fwk.2, uc008fwl.2, uc008fwm.2, uc008fwo.2, uc008fwp.2, uc012bfw.1_5end
EntrezGene:Ppp6r3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ppp6r3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G756.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I568.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I659.15
CD326+ enterocyte, pool1.CNhs13542.11848-124I389.83
CD326+ enterocyte, pool2.CNhs13197.11849-124I497.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I747.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I859.80
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E984.45
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7118.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2115.16
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E668.49
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F170.04
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4107.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8100.18
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A162.62
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A385.85
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A595.84
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A293.38
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4112.02
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A693.79
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A368.97
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H268.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I984.11
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D177.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D265.38
GP2+ M cell, pool1.CNhs13228.11845-124H951.68
GP2+ M cell, pool2.CNhs13231.11846-124I164.18
GP2+ M cell, pool3.CNhs13240.11847-124I261.19
Ileum epithelium, pool1.CNhs13199.10252-104B971.64
Ileum epithelium, pool2.CNhs13232.10253-104C195.27
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C853.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I334.93
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G638.13
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E963.39
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F556.04
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F650.37
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F748.39
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8106.73
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H172.66
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3107.32
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9105.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2122.27
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H497.59
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D866.98
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D965.39
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B344.60
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.17
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C212.43
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B813.62
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C323.91
Mouse Astrocytes, donor2.CNhs12078.11552-120C416.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2107.38
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9108.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1100.16
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C145.53
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E146.42
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C551.05
Mouse Granule cells, donor1.CNhs12131.11713-123C330.15
Mouse Granule cells, donor2.CNhs12357.11731-123E338.09
Mouse Granule cells, donor3.CNhs12108.11636-122C731.06
Mouse Meningeal cells, donor1.CNhs12132.11716-123C610.84
Mouse Meningeal cells, donor3.CNhs12109.11639-122D110.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E79.89
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D211.37
Mouse Microglia, donor1.CNhs12629.11718-123C88.39
Mouse Microglia, donor2.CNhs12634.11736-123E813.83
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D558.90
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F539.15
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D946.27
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F115.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D521.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D253.41
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F244.66
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D654.23
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D341.84
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F345.46
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D743.78
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D429.01
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F440.07
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D848.44
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E430.43
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E542.77
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I640.95
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D647.44
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F667.63
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E143.24
Mouse Schwann, donor1.CNhs12507.11728-123D955.51
Mouse Schwann, donor2.CNhs12573.11746-123F953.88
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3109.86
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F739.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C430.60
Mouse hepatocyte, donor3.CNhs12615.11637-122C851.81
Mouse hepatocyte, donor6.CNhs13090.11822-124F455.23
Mouse hepatocyte, donor8.CNhs13091.11824-124F652.42
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A766.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I762.89
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E346.50
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I835.69
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G653.80
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H173.15
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G135.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G242.82
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G346.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B657.09
accessory axillary lymph node, adult.CNhs10475.1063-29H9167.01
adrenal gland, adult.CNhs10508.49-24D780.31
adrenal gland, embryo E14.CNhs11038.406-44C552.57
adrenal gland, embryo E16.CNhs11004.1254-43D663.63
adrenal gland, embryo E17.CNhs11043.1263-45I153.96
adrenal gland, embryo E18.CNhs11026.1262-18F565.56
adrenal gland, neonate N00.CNhs11191.1311-23C187.13
adrenal gland, neonate N25.CNhs11223.1377-27I355.80
amnion, adult pregnant day17.5.CNhs10488.583-22A8117.42
aorta, adult.CNhs10498.46-23H193.56
bone (os femoris), adult.CNhs10483.56-12G2106.15
bone (os femoris), neonate N02.CNhs11227.1985-43F566.32
bone (os femoris), neonate N16.CNhs11225.1525-43A670.67
bone (os femoris), neonate N20.CNhs11195.1350-25C366.43
cecum, adult.CNhs10467.37-13H4132.34
cerebellum, adult.CNhs10494.15-8B2101.30
cerebellum, neonate N30.CNhs11135.1395-42I297.39
colon, adult.CNhs10468.36-18H799.12
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C788.66
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D154.59
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D476.37
corpora quadrigemina, adult.CNhs10501.16-22A465.91
corpus striatum, adult.CNhs10487.19-21D858.10
corpus striatum, neonate N00.CNhs11226.630-43F162.45
cortex, adult.CNhs10473.12-14D562.75
cortex, neonate N30.CNhs11107.1392-42F258.81
diencephalon, adult.CNhs10482.20-12F260.67
diencephalon, neonate N30.CNhs11201.1388-42B254.35
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B167.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A275.52
epididymis, adult.CNhs10490.58-23B273.54
eyeball, adult.CNhs10484.31-12G488.18
eyeball, embryo E12.CNhs11016.345-16C682.11
eyeball, embryo E14.CNhs10521.399-16E265.52
eyeball, embryo E15.CNhs10593.426-16C983.01
eyeball, embryo E17.CNhs11023.1261-18D484.55
eyeball, neonate N00.CNhs11207.633-15C691.92
eyeball, neonate N01.CNhs11140.1532-43E7111.46
eyeball, neonate N02.CNhs11205.1551-44G886.96
eyeball, neonate N16.CNhs11188.777-19A294.69
forelimb, embryo E11.CNhs10596.335-25E286.01
forelimb, embryo E12.CNhs10600.359-14H2116.49
forelimb, embryo E13.CNhs10589.384-1E296.60
forelimb, embryo E14.CNhs10577.413-26A867.73
forelimb, embryo E15.CNhs11007.437-20E7102.88
forelimb, embryo E17.CNhs10598.1517-43C481.49
forelimb, embryo E18.CNhs11008.1520-43B585.61
gonad, embryo E13.CNhs11044.1564-45I671.85
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C856.88
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D263.31
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D558.82
heart, embryo E11.CNhs10586.331-24E985.75
heart, embryo E12.CNhs11015.353-12F579.97
heart, embryo E13.CNhs11013.376-3I975.99
heart, embryo E14.CNhs10597.403-26D4103.69
heart, embryo E15.CNhs11017.431-16C890.91
heart, embryo E16.CNhs11021.457-17C693.33
heart, embryo E17.CNhs11025.479-18E587.90
heart, embryo E18.CNhs11030.1283-20G381.29
heart, neonate N00.CNhs11213.639-21E398.20
heart, neonate N03.CNhs11221.1349-25I275.37
heart, neonate N10.CNhs11118.749-24G193.08
heart, neonate N16.CNhs11209.782-15G195.99
heart, neonate N20.CNhs11127.821-26I699.27
heart, neonate N25.CNhs11196.1351-25D395.07
heart, neonate N30.CNhs11202.1390-42D298.78
hippocampus, adult.CNhs10478.13-16E867.92
hippocampus, neonate N00.CNhs11228.627-43G166.58
intestinal mucosa, adult.CNhs10506.860-29I398.46
intestine, adult.CNhs10496.178-9A386.21
intestine, embryo E12.CNhs11019.1251-16I577.64
intestine, embryo E13.CNhs11010.381-16D594.29
intestine, embryo E15.CNhs10602.976-16D894.46
intestine, embryo E16.CNhs10585.463-22H492.77
intestine, embryo E17.CNhs10582.482-18D386.28
intestine, embryo E18.CNhs10526.1289-20F770.76
intestine, neonate N00.CNhs11126.644-26D187.31
intestine, neonate N01.CNhs11192.1322-23E991.24
intestine, neonate N06.CNhs11102.688-20B880.93
intestine, neonate N07.CNhs11095.720-20F282.96
intestine, neonate N10.CNhs11098.755-23A581.30
intestine, neonate N20.CNhs11187.827-18D1100.67
intestine, neonate N25.CNhs11121.1352-25E392.51
intestine, neonate N30.CNhs11131.1384-42G193.20
kidney, embryo E14.CNhs10606.411-4I943.81
kidney, embryo E15.CNhs10997.434-16F876.43
kidney, embryo E16.CNhs10584.464-22A587.91
kidney, embryo E17.CNhs11028.483-18I281.46
kidney, embryo E18.CNhs11001.1288-20C779.33
kidney, neonate N00.CNhs11214.646-21G774.83
kidney, neonate N10.CNhs11206.758-6D578.03
kidney, neonate N20.CNhs11113.832-19I178.68
kidney, neonate N25.CNhs11122.1353-25F380.85
kidney, neonate N30.CNhs11203.1385-42H171.94
liver, adult pregnant day01.CNhs10466.508-5B259.59
liver, embryo E12.CNhs10601.355-15F877.42
liver, embryo E13.CNhs10524.378-3H667.22
liver, embryo E14.CNhs10594.409-16E185.45
liver, embryo E15.CNhs10520.433-16D775.46
liver, embryo E16.CNhs10523.462-17F586.10
liver, embryo E17.CNhs10510.481-18A370.79
liver, embryo E18.CNhs10579.499-43G479.98
liver, neonate N00.CNhs11117.641-24F489.34
liver, neonate N03.CNhs11123.1345-25G267.27
liver, neonate N06.CNhs11101.684-20A879.07
liver, neonate N07.CNhs11103.716-20H293.41
liver, neonate N10.CNhs11115.751-24B976.76
liver, neonate N20.CNhs11220.823-25A379.56
liver, neonate N25.CNhs11198.1368-26H168.89
liver, neonate N30.CNhs11106.1382-42D168.02
lung, adult.CNhs10474.28-22B196.44
lung, embryo E12.CNhs10522.354-16G275.99
lung, embryo E14.CNhs10604.404-26F8102.18
lung, embryo E15.CNhs11020.432-17C581.14
lung, embryo E16.CNhs10998.458-17B691.53
lung, embryo E17.CNhs10605.480-44A6115.75
lung, embryo E18.CNhs10583.1287-20I6102.60
lung, neonate N00.CNhs11224.640-42C694.25
lung, neonate N06.CNhs11212.683-20E5110.98
lung, neonate N07.CNhs11111.715-19A3106.08
lung, neonate N10.CNhs11219.750-23E695.19
lung, neonate N20.CNhs11109.822-18A489.96
lung, neonate N25.CNhs11119.1359-25C786.52
lung, neonate N30.CNhs11133.1394-42H2102.70
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A170.87
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A159.83
mammary gland, adult lactating day02.CNhs10480.595-22B681.14
mammary gland, adult pregnant day19.CNhs10476.588-5H281.13
medulla oblongata, adult.CNhs10477.17-12C256.83
medulla oblongata, neonate N30.CNhs11200.1396-42A359.43
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C751.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C289.37
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E166.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E284.33
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E369.58
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D777.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D877.98
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D961.71
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D468.82
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D566.93
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D665.62
olfactory brain, adult.CNhs10489.18-22I999.93
ovary, adult.CNhs10507.91-2I788.00
ovary, embryo E18.CNhs11040.505-44H738.11
ovary, neonate N00.CNhs11217.1299-22I470.86
oviduct, adult pregnant day01.CNhs10500.988-6G681.99
pancreas, adult.CNhs10486.34-16E475.66
pancreas, embryo E14.CNhs11012.405-44F463.85
pancreas, embryo E15.CNhs11042.1556-45F248.67
pancreas, embryo E16.CNhs11003.460-26E558.84
pancreas, embryo E17.CNhs10599.1558-45G340.75
pancreas, embryo E18.CNhs10580.1535-43I770.40
pancreas, neonate N00.CNhs11105.645-26G969.52
pancreas, neonate N01.CNhs11138.1531-43D785.43
pancreas, neonate N02.CNhs11139.1539-43D871.66
pancreas, neonate N16.CNhs11136.787-43B671.42
pancreas, neonate N25.CNhs11094.1555-45E260.09
pancreas, neonate N30.CNhs11182.1548-44H571.16
pituitary gland, adult.CNhs10493.21-1G8104.51
pituitary gland, embryo E12.CNhs11018.346-16E680.85
pituitary gland, embryo E13.CNhs11009.370-44C736.35
pituitary gland, embryo E14.CNhs11037.398-44A569.66
pituitary gland, embryo E15.CNhs10592.427-16B990.44
pituitary gland, embryo E16.CNhs11036.449-43F665.64
pituitary gland, embryo E17.CNhs11039.1265-44F561.87
pituitary gland, neonate N00.CNhs11190.1308-22E944.15
placenta, adult pregnant day10.CNhs10472.539-13I757.73
placenta, adult pregnant day17.CNhs10464.577-18G392.78
prostate, adult.CNhs10470.859-1F861.75
skin, adult.CNhs10492.30-1C381.95
skin, neonate N00.CNhs11124.650-25G4106.41
skin, neonate N03.CNhs11215.662-22H388.96
skin, neonate N06.CNhs11097.693-20I577.00
skin, neonate N10.CNhs11108.762-6C479.61
small intestine, neonate N16.CNhs11114.790-21I187.15
spinal cord, adult.CNhs10505.24-13C958.97
spleen, adult.CNhs10465.25-2G274.84
spleen, embryo E16.CNhs11035.461-43C169.55
spleen, embryo E18.CNhs11011.1271-21F280.93
spleen, neonate N10.CNhs11116.752-24D196.44
spleen, neonate N20.CNhs11112.824-19H198.15
spleen, neonate N25.CNhs11099.1354-25G386.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C665.61
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C961.44
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D372.00
stomach, adult.CNhs10503.33-1H637.23
stomach, embryo E12.CNhs10588.356-43E377.34
stomach, embryo E15.CNhs10603.1252-16G892.71
stomach, embryo E16.CNhs11022.459-17D476.25
stomach, embryo E17.CNhs11006.1035-18D578.41
stomach, embryo E18.CNhs10999.1286-20C675.34
stomach, neonate N03.CNhs11193.1340-24B874.85
stomach, neonate N07.CNhs11210.718-18A976.87
stomach, neonate N25.CNhs11104.1355-25E456.54
stomach, neonate N30.CNhs11134.1386-42I187.88
submandibular gland, adult.CNhs10469.59-29C180.15
testis, adult.CNhs10504.57-7G571.59
testis, embryo E13.CNhs11031.389-23F593.90
testis, embryo E15.CNhs11034.443-27C563.21
testis, embryo E16.CNhs11033.470-26G574.09
testis, embryo E17.CNhs11029.486-18I570.26
testis, embryo E18.CNhs11027.503-18G580.42
testis, neonate N00.CNhs11189.1300-22B792.13
testis, neonate N07.CNhs11222.726-26I474.09
testis, neonate N10.CNhs11204.763-44D987.45
testis, neonate N20.CNhs11110.839-18H380.93
testis, neonate N30.CNhs11130.1391-42E286.41
thymus, adult.CNhs10471.38-12B5110.92
thymus, embryo E14.CNhs11041.402-44I451.09
thymus, embryo E15.CNhs11005.430-45I266.86
thymus, embryo E16.CNhs11002.456-26C582.37
thymus, embryo E17.CNhs10581.478-18C195.78
thymus, embryo E18.CNhs10595.1273-19G4127.75
thymus, neonate N02.CNhs11181.1541-43F8103.97
thymus, neonate N03.CNhs11137.2104-43C7104.27
thymus, neonate N06.CNhs11197.681-26C4122.07
thymus, neonate N07.CNhs11211.713-19D3112.71
thymus, neonate N10.CNhs11194.748-24E4129.26
thymus, neonate N20.CNhs11186.820-7A2122.11
thymus, neonate N25.CNhs11125.1362-25G7115.74
thymus, neonate N30.CNhs11132.1393-42G2129.85
tongue, adult.CNhs10499.32-1B493.19
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H359.49
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F768.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G553.72
urinary bladder, adult.CNhs10481.879-12E473.41
uterus, adult pregnant day19.CNhs10497.590-15F563.81
uterus, adult.CNhs10509.92-27E572.71
vagina, adult.CNhs10502.89-27D567.53
vesicular gland, adult.CNhs10491.51-27F870.72
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A158.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A270.43
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A371.61
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D758.43
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A458.23
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A564.96
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A662.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A769.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A867.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A960.58
whole body, embryo E11.CNhs11014.324-5I874.93
whole body, embryo E12.CNhs10587.857-27C965.04
whole body, embryo E13.CNhs10512.372-23H282.46
whole body, embryo E14.5.CNhs10578.420-27D280.47
whole body, embryo E14.CNhs10519.395-14B156.60
whole body, embryo E16.CNhs10514.453-14F247.25
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G568.01
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G570.67
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G560.65
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G566.21
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G567.43
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G578.28
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G566.20
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G567.93
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G566.91
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G577.16
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G565.36
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G566.94
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G553.98
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G575.22
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G564.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G557.15
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G566.76
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G575.43
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G576.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G559.99
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G568.05
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G564.72
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G566.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G570.70
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G561.81
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G558.02
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G566.70
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G567.24
whole body, embryo E17.5.CNhs10513.490-9F972.15
whole body, embryo E17.CNhs10517.475-3I559.45
whole body, embryo E18.CNhs10516.493-3B373.69
whole body, neonate N00.CNhs10525.657-19C285.30
whole body, neonate N01.CNhs10576.659-23C683.98
whole body, neonate N06.CNhs10515.692-21D175.88
whole body, neonate N10.CNhs10518.761-6B477.21





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
primordium2.17e-11134
subdivision of digestive tract2.11e-08114
digestive system2.77e-08116
digestive tract2.77e-08116
primitive gut2.77e-08116
endoderm-derived structure3.01e-08118
endoderm3.01e-08118
presumptive endoderm3.01e-08118
respiratory system5.18e-0842
respiratory tract5.91e-0841
anterior region of body1.45e-0743
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:3575708..3575756,-&oldid=4201559"