FFCP PHASE1:Mm9::chr19:37772282..37772295,+: Difference between revisions
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|id=chr19:37772282..37772295,+
|short_description=p2@Cyp26a1
|description=CAGE_peak_2_at_Cyp26a1_5end
|association_with_transcript=-2bp_to_ENSMUST00000025946,NM_007...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=13082 | |EntrezGene=13082 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3190 | |||
|TSSclassifier=NA | |||
|UniProt=O55127 | |UniProt=O55127 | ||
|association_with_transcript=-2bp_to_ENSMUST00000025946,NM_007811,uc008his.2_5end | |||
|cluster_id=chr19:37772282..37772295,+ | |||
|description=CAGE_peak_2_at_Cyp26a1_5end | |||
|id=chr19:37772282..37772295,+ | |||
|ontology_enrichment_celltype=CL:0000349!6.35e-07!3;CL:0000351!6.35e-07!3 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!2.11e-14!9;UBERON:0000019!2.11e-14!9;UBERON:0000047!2.11e-14!9;UBERON:0004088!2.11e-14!9;UBERON:0002104!2.11e-14!9;UBERON:0001456!2.11e-14!9;UBERON:0003072!2.11e-14!9;UBERON:0003071!2.11e-14!9;UBERON:0004128!2.11e-14!9;UBERON:0001444!1.83e-11!11;UBERON:0000020!2.31e-10!12;UBERON:0001032!2.31e-10!12;UBERON:0004456!2.31e-10!12;UBERON:0005085!1.97e-09!13;UBERON:0000358!6.35e-07!3;UBERON:0000307!6.35e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,6.83e-43,9;UBERON:0000019,6.83e-43,9;UBERON:0000047,6.83e-43,9;UBERON:0010312,6.83e-43,9;UBERON:0004088,6.83e-43,9;UBERON:0002104,6.83e-43,9;UBERON:0001456,6.83e-43,9;UBERON:0003072,6.83e-43,9;UBERON:0004128,6.83e-43,9;UBERON:0003071,6.83e-43,9;UBERON:0001444,4.47e-35,11;UBERON:0000020,3.83e-32,12;UBERON:0001032,3.83e-32,12;UBERON:0004456,3.83e-32,12;UBERON:0000033,1.17e-29,13;UBERON:0005085,1.17e-29,13;UBERON:0007811,1.57e-10,36;UBERON:0006834,1.44e-09,1;UBERON:0000153,9.46e-09,43;UBERON:0003056,1.26e-07,49;UBERON:0002346,1.97e-07,64;UBERON:0003075,1.97e-07,64;UBERON:0007284,1.97e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,1.29955283489534,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04096354370163,1.37941262660084,1.0803727788321,1.35634336052144,1.7009124787832,1.92170580427275,1.40552586839593,0.258703370739016,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0,0,0,0.219550115291051,0,0,0,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0.631016438832513,0,1.07711698866399,0,0.445597348164788,0.849229592366497,0.404810701674894,0,0,0,0.709700426041343,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0.535106452806212,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0.665957860122194,2.33256027184637,0.503653849092235,0,1.87682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0.169229215783353,0,0,0,0.561142271657738,0.118635018124174,0,0,0,0,0.749431733813838,0,0,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,1.29955283489534,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04096354370163,1.37941262660084,1.0803727788321,1.35634336052144,1.7009124787832,1.92170580427275,1.40552586839593,0.258703370739016,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0,0,0,0.219550115291051,0,0,0,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0.631016438832513,0,1.07711698866399,0,0.445597348164788,0.849229592366497,0.404810701674894,0,0,0,0.709700426041343,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0.535106452806212,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0.665957860122194,2.33256027184637,0.503653849092235,0,1.87682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0.169229215783353,0,0,0,0.561142271657738,0.118635018124174,0,0,0,0,0.749431733813838,0,0,0.191288332068843,0,0 | ||
|short_description=p2@Cyp26a1 | |||
}} | }} |
Latest revision as of 16:46, 25 September 2015
Short description: | p2@Cyp26a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cyp26a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3190 |
Association with transcript: | -2bp_to_ENSMUST00000025946, NM_007811, uc008his.2_5end |
EntrezGene: | Cyp26a1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 6.83e-43 | 9 |
camera-type eye | 6.83e-43 | 9 |
simple eye | 6.83e-43 | 9 |
immature eye | 6.83e-43 | 9 |
ocular region | 6.83e-43 | 9 |
visual system | 6.83e-43 | 9 |
face | 6.83e-43 | 9 |
optic cup | 6.83e-43 | 9 |
optic vesicle | 6.83e-43 | 9 |
eye primordium | 6.83e-43 | 9 |
subdivision of head | 4.47e-35 | 11 |
sense organ | 3.83e-32 | 12 |
sensory system | 3.83e-32 | 12 |
entire sense organ system | 3.83e-32 | 12 |
head | 1.17e-29 | 13 |
ectodermal placode | 1.17e-29 | 13 |
craniocervical region | 1.57e-10 | 36 |
uterus or analog | 1.44e-09 | 1 |
anterior region of body | 9.46e-09 | 43 |
pre-chordal neural plate | 1.26e-07 | 49 |
neurectoderm | 1.97e-07 | 64 |
neural plate | 1.97e-07 | 64 |
presumptive neural plate | 1.97e-07 | 64 |