FFCP PHASE1:Mm9::chr2:129418658..129418676,+: Difference between revisions
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{{FFCP|EntrezGene=19261|HGNC=|MCL_coexpression_id=38|UniProt=Q6P6I8|association_with_transcript=8bp_to_ENSMUST00000103203_5end|description=CAGE_peak_8_at_Sirpa_5end|id=chr2:129418658..129418676,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000839,1.93e-07,13;CL:0000049,1.93e-07,19;CL:0002194,3.46e-07,4;CL:0000766,3.46e-07,4;CL:0000234,3.46e-07,4;CL:0000576,3.46e-07,4;CL:0000235,3.46e-07,4;CL:0000864,3.46e-07,4;CL:0002009,3.46e-07,4;CL:0000040,3.46e-07,4;CL:0000559,3.46e-07,4;CL:0000763,8.65e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!7.78e-10!70;UBERON:0002204!9.26e-08!32;UBERON:0001474!1.41e-07!22;UBERON:0004765!1.41e-07!22;UBERON:0001434!1.41e-07!22;UBERON:0002371!1.87e-07!16;UBERON:0002193!9.32e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.30e-13,16;UBERON:0002193,1.90e-11,48;UBERON:0002405,1.90e-11,48;UBERON:0002390,2.31e-11,45;UBERON:0003061,2.31e-11,45;UBERON:0002204,3.43e-10,32;UBERON:0001474,6.62e-10,22;UBERON:0004765,6.62e-10,22;UBERON:0001434,6.62e-10,22;UBERON:0002106,1.44e-08,6;UBERON:0004457,1.44e-08,6;UBERON:0000042,1.44e-08,6;UBERON:0004854,1.44e-08,6;UBERON:0009034,1.44e-08,6;UBERON:0002095,1.44e-08,6;UBERON:0004782,1.44e-08,6;UBERON:0003281,1.44e-08,6;UBERON:0009664,1.44e-08,6;UBERON:0002296,1.44e-08,6;UBERON:0005602,1.44e-08,6;UBERON:0001179,1.44e-08,6;UBERON:0006293,1.44e-08,6;UBERON:0009569,7.84e-08,66;UBERON:0003887,1.07e-07,10;UBERON:0001041,5.31e-07,80;UBERON:0002100,7.44e-07,90|phase1_expression=0.480446541314382,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,1.66554880907831,1.61980213911861,2.09868563438444,1.89277299214943,0.822686601634433,1.69755860719212,0.935476191661768,0.198581902401771,0,0.95995453676044,0.91763712426868,0,0,0,0,0,0.665191531965914,0,0,0,0,0,0,7.11503772252743,2.3440060335714,3.14114246384279,9.41170380849623,6.14740936462601,5.82612423637384,0.503587271902309,0.506884656097573,0.367093504323363,0,0.65407546914134,0.219686182734472,0.777719596297134,0.55994568650145,1.43752564364972,0,0,0,0.257259436035947,1.43266719969378,0.515672092277442,0,1.05798195854407,0.633831403506179,0.677689064138264,0.889294796111139,67.4924787961049,98.8866362566974,76.7318524141788,15.579205746957,10.7581125490035,0.311068836925433,0.135005938331691,0,0.856952953211411,0,0.122490799214954,0.0958454710182364,0,1.10115880999389,0.510749352340751,0.46081959976873,0.131886287730194,0.640413505216868,1.04182674111352,0.558365998002762,0.56276261003168,0.61119299110724,0,0.427115042397309,0.186399445825301,0,0.226714680320357,0.869593466105033,0,0,0,0.649776417447669,0,0.702222100658759,0.340860645156116,0,0.70667914902068,0.14084341977668,0,0,0,0,0.253359865475099,0,0.68510327831436,4.66088190564909,0.742210695324124,0.173485326766136,0.304465478312141,0.230615497256059,0.301445281105245,0.23517741427141,0.376999773989026,0.494389935468748,0,6.19227386364912,0.808834249737046,0.662524555381181,0.969750506270444,0,0.878342391034642,1.04723353406728,0,0.599075622529601,1.19980546198682,1.01656181658452,0.449371918214468,0.915001205637253,0,1.04294592115366,0.511430914660661,0.83115217823824,0.973447578406546,1.01839363850316,2.11491850037158,0,0.420883711772948,0.130120442962704,0.689706313300419,0,0,0.272145996605311,0.384341160854549,0.562210347358373,0.517406741478031,0.862271971731369,0,0.175951124163949,0.219195732427575,0,0,0.411564272815887,0.199034266818493,0,0.51469581422943,1.13665399758237,0,0,0.36012412292203,0.23674473558521,0.590292695242212,0.462801338662135,0.232533944750408,0.268273401399619,0.350296027101508,0.329119699826961,0,0,0,0.439100230582101,0.805238512562231,0.630869845692382,0.411618449517138,0,0,0.426576501070468,0,0.38660238396628,0.201683524623343,0.444756087689741,0.570676878337677,0,0.164698954724011,0,0.198956472041151,0.58489226135736,0,0.216138049874694,0.398282546508734,0.189667900953082,0.114248512609729,0,0.610953983535943,0.775809948670503,0.701358198903186,0.379419222745544,0.442830443938806,0.156998727841375,0.123397163921801,0.889357881261447,0.333690211432188,0.982794975566015,2.47348323623339,2.23146133527353,0.964708639009667,2.5462585178142,2.5892652370573,3.24270453550071,1.37280706594041,10.0637744569148,3.72140947668503,3.12037673114561,1.51547326768267,0.717589654087649,0.482443521363367,2.58654466233247,0.37898282354097,0.325929952884052,0.339490171550376,0.234690248288502,0.502518772325447,1.42826184531608,2.92700471786698,2.04925687338048,1.55025282754142,2.87018583583477,2.29408640602033,2.07221978239075,2.74833211304872,78.4114676484216,70.7077388964322,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0.445597348164788,0,0,0,0,0.642642632843614,0.141940085208269,0.534196811001766,0.81443479676788,0.989820737835213,0,0.971122544619926,0,0.565815239267694,0.885905678642318,0.307435147943927,0.258428293168221,0.727067458955011,0.356497378384721,0.632073515871632,0,0,0,0.900305470156551,0.388076051348264,0.643011105094777,0.1773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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19261 | |||
|HGNC= | |||
|MCL_coexpression_id=38 | |||
|TSSclassifier=NA | |||
|UniProt=Q6P6I8 | |||
|association_with_transcript=8bp_to_ENSMUST00000103203_5end | |||
|cluster_id=chr2:129418658..129418676,+ | |||
|description=CAGE_peak_8_at_Sirpa_5end | |||
|id=chr2:129418658..129418676,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,1.93e-07,13;CL:0000049,1.93e-07,19;CL:0002194,3.46e-07,4;CL:0000766,3.46e-07,4;CL:0000234,3.46e-07,4;CL:0000576,3.46e-07,4;CL:0000235,3.46e-07,4;CL:0000864,3.46e-07,4;CL:0002009,3.46e-07,4;CL:0000040,3.46e-07,4;CL:0000559,3.46e-07,4;CL:0000763,8.65e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!7.78e-10!70;UBERON:0002204!9.26e-08!32;UBERON:0001474!1.41e-07!22;UBERON:0004765!1.41e-07!22;UBERON:0001434!1.41e-07!22;UBERON:0002371!1.87e-07!16;UBERON:0002193!9.32e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.30e-13,16;UBERON:0002193,1.90e-11,48;UBERON:0002405,1.90e-11,48;UBERON:0002390,2.31e-11,45;UBERON:0003061,2.31e-11,45;UBERON:0002204,3.43e-10,32;UBERON:0001474,6.62e-10,22;UBERON:0004765,6.62e-10,22;UBERON:0001434,6.62e-10,22;UBERON:0002106,1.44e-08,6;UBERON:0004457,1.44e-08,6;UBERON:0000042,1.44e-08,6;UBERON:0004854,1.44e-08,6;UBERON:0009034,1.44e-08,6;UBERON:0002095,1.44e-08,6;UBERON:0004782,1.44e-08,6;UBERON:0003281,1.44e-08,6;UBERON:0009664,1.44e-08,6;UBERON:0002296,1.44e-08,6;UBERON:0005602,1.44e-08,6;UBERON:0001179,1.44e-08,6;UBERON:0006293,1.44e-08,6;UBERON:0009569,7.84e-08,66;UBERON:0003887,1.07e-07,10;UBERON:0001041,5.31e-07,80;UBERON:0002100,7.44e-07,90 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,1.66554880907831,1.61980213911861,2.09868563438444,1.89277299214943,0.822686601634433,1.69755860719212,0.935476191661768,0.198581902401771,0,0.95995453676044,0.91763712426868,0,0,0,0,0,0.665191531965914,0,0,0,0,0,0,7.11503772252743,2.3440060335714,3.14114246384279,9.41170380849623,6.14740936462601,5.82612423637384,0.503587271902309,0.506884656097573,0.367093504323363,0,0.65407546914134,0.219686182734472,0.777719596297134,0.55994568650145,1.43752564364972,0,0,0,0.257259436035947,1.43266719969378,0.515672092277442,0,1.05798195854407,0.633831403506179,0.677689064138264,0.889294796111139,67.4924787961049,98.8866362566974,76.7318524141788,15.579205746957,10.7581125490035,0.311068836925433,0.135005938331691,0,0.856952953211411,0,0.122490799214954,0.0958454710182364,0,1.10115880999389,0.510749352340751,0.46081959976873,0.131886287730194,0.640413505216868,1.04182674111352,0.558365998002762,0.56276261003168,0.61119299110724,0,0.427115042397309,0.186399445825301,0,0.226714680320357,0.869593466105033,0,0,0,0.649776417447669,0,0.702222100658759,0.340860645156116,0,0.70667914902068,0.14084341977668,0,0,0,0,0.253359865475099,0,0.68510327831436,4.66088190564909,0.742210695324124,0.173485326766136,0.304465478312141,0.230615497256059,0.301445281105245,0.23517741427141,0.376999773989026,0.494389935468748,0,6.19227386364912,0.808834249737046,0.662524555381181,0.969750506270444,0,0.878342391034642,1.04723353406728,0,0.599075622529601,1.19980546198682,1.01656181658452,0.449371918214468,0.915001205637253,0,1.04294592115366,0.511430914660661,0.83115217823824,0.973447578406546,1.01839363850316,2.11491850037158,0,0.420883711772948,0.130120442962704,0.689706313300419,0,0,0.272145996605311,0.384341160854549,0.562210347358373,0.517406741478031,0.862271971731369,0,0.175951124163949,0.219195732427575,0,0,0.411564272815887,0.199034266818493,0,0.51469581422943,1.13665399758237,0,0,0.36012412292203,0.23674473558521,0.590292695242212,0.462801338662135,0.232533944750408,0.268273401399619,0.350296027101508,0.329119699826961,0,0,0,0.439100230582101,0.805238512562231,0.630869845692382,0.411618449517138,0,0,0.426576501070468,0,0.38660238396628,0.201683524623343,0.444756087689741,0.570676878337677,0,0.164698954724011,0,0.198956472041151,0.58489226135736,0,0.216138049874694,0.398282546508734,0.189667900953082,0.114248512609729,0,0.610953983535943,0.775809948670503,0.701358198903186,0.379419222745544,0.442830443938806,0.156998727841375,0.123397163921801,0.889357881261447,0.333690211432188,0.982794975566015,2.47348323623339,2.23146133527353,0.964708639009667,2.5462585178142,2.5892652370573,3.24270453550071,1.37280706594041,10.0637744569148,3.72140947668503,3.12037673114561,1.51547326768267,0.717589654087649,0.482443521363367,2.58654466233247,0.37898282354097,0.325929952884052,0.339490171550376,0.234690248288502,0.502518772325447,1.42826184531608,2.92700471786698,2.04925687338048,1.55025282754142,2.87018583583477,2.29408640602033,2.07221978239075,2.74833211304872,78.4114676484216,70.7077388964322,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0.445597348164788,0,0,0,0,0.642642632843614,0.141940085208269,0.534196811001766,0.81443479676788,0.989820737835213,0,0.971122544619926,0,0.565815239267694,0.885905678642318,0.307435147943927,0.258428293168221,0.727067458955011,0.356497378384721,0.632073515871632,0,0,0,0.900305470156551,0.388076051348264,0.643011105094777,0.177340233642274,0.178368817602071,1.15184314421485,0,0.23467170806371,0.42366414172764,0.220528398054962,0.65954501176592,1.61464426695906,0.482503399425247,0.238744688006273,0.164140899745061,0.582961673259701,0.556275906031529,6.1513517087227,2.88941615148511,2.03713980106683,3.01389531207506,2.87057878214153,6.40578884978263,0.169978429993855,0.139951452323658,0.414599921413271,0,0.632671987162271,0.406638934253697,0.108005340821801,0.418176592028937,0.87345025498471,0.539457385539283,0.578574190077352,0,0.129614973291793,0.621339313086926,0,0.598066184175915,0.330916980914195,0.388902376688095,0.387479470433193,0.168956125490778,0.704143431874524,0.39061315453185,0.314578033277133,0.483168241652012,0,1.26404448251271,0.608175645870493,0.718976700153791,0.389762468933385,0.537080087002444,1.58945083825012,0.480781798079875,0.147689527174577,0.706765149637033,0.990688486514998,0.907435666231565,1.26695244961678,1.25075394132428,1.16876902181569,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0.549454872801795,1.07184189539533,0,1.12950368523413,0.460325236507177,2.86447756719698,0.859265911718438,1.37016503954128,0,1.35004500046361,0.45032120322422,0,0,0.103787347584177,0.798049746802062,0.512200817262403,0.729320151204882,0.419226325255965,0,1.33348036680969,0.206035057238894,1.28367683836726,0.252697211763798,0.25347929989024,0.377252682772152,0.37456602987953,0.512201219238954,0.746661096422973,0.952587382566147,0.463537303779422,0.38581844092741,0.824171801606613,0.441596760403192,0.68573850477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| |||
|short_description=p8@Sirpa | |||
}} |
Latest revision as of 17:23, 25 September 2015
Short description: | p8@Sirpa |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Sirpa_5end |
Coexpression cluster: | MCL_coexpression_mm9:38 |
Association with transcript: | 8bp_to_ENSMUST00000103203_5end |
EntrezGene: | Sirpa |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 1.93e-07 | 13 |
common myeloid progenitor | 1.93e-07 | 19 |
monopoietic cell | 3.46e-07 | 4 |
myeloid leukocyte | 3.46e-07 | 4 |
phagocyte | 3.46e-07 | 4 |
monocyte | 3.46e-07 | 4 |
macrophage | 3.46e-07 | 4 |
tissue-resident macrophage | 3.46e-07 | 4 |
macrophage dendritic cell progenitor | 3.46e-07 | 4 |
monoblast | 3.46e-07 | 4 |
promonocyte | 3.46e-07 | 4 |
myeloid cell | 8.65e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.30e-13 | 16 |
hemolymphoid system | 1.90e-11 | 48 |
immune system | 1.90e-11 | 48 |
hematopoietic system | 2.31e-11 | 45 |
blood island | 2.31e-11 | 45 |
musculoskeletal system | 3.43e-10 | 32 |
bone element | 6.62e-10 | 22 |
skeletal element | 6.62e-10 | 22 |
skeletal system | 6.62e-10 | 22 |
spleen | 1.44e-08 | 6 |
cavity lining | 1.44e-08 | 6 |
serous membrane | 1.44e-08 | 6 |
gastrointestinal system mesentery | 1.44e-08 | 6 |
stomach region | 1.44e-08 | 6 |
mesentery | 1.44e-08 | 6 |
gastrointestinal system serosa | 1.44e-08 | 6 |
mesentery of stomach | 1.44e-08 | 6 |
gut mesentery | 1.44e-08 | 6 |
dorsal mesentery | 1.44e-08 | 6 |
dorsal mesogastrium | 1.44e-08 | 6 |
peritoneal cavity | 1.44e-08 | 6 |
spleen primordium | 1.44e-08 | 6 |
subdivision of trunk | 7.84e-08 | 66 |
intraembryonic coelom | 1.07e-07 | 10 |
foregut | 5.31e-07 | 80 |
trunk | 7.44e-07 | 90 |