FFCP PHASE1:Mm9::chr7:121889188..121889197,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=233752|HGNC=|MCL_coexpression_id=107|UniProt=D3Z267|association_with_transcript=-56bp_to_ENSMUST00000136645_5end|description=CAGE_peak_9_at_Insc_5end|id=chr7:121889188..121889197,+|ontology_enrichment_celltype=CL:0000107!6.09e-12!9;CL:0000221!2.22e-10!44;CL:0000133!2.22e-10!44;CL:0002319!1.46e-09!43;CL:0000540!4.73e-09!33;CL:0000047!4.73e-09!33;CL:0000031!4.73e-09!33;CL:0000404!4.73e-09!33;CL:0000055!3.13e-07!50;CL:0000393!9.08e-07!39;CL:0000211!9.08e-07!39|ontology_enrichment_celltype_v019_2=CL:0000107,3.07e-32,9;CL:0000217,5.72e-17,2;CL:0000328,5.72e-17,2;CL:0002573,5.72e-17,2;CL:0002376,5.72e-17,2;CL:0000218,5.72e-17,2;CL:0000692,5.72e-17,2;CL:0002377,5.72e-17,2;CL:0002375,5.72e-17,2;CL:0000221,2.82e-14,44;CL:0000133,2.82e-14,44;CL:0000215,1.21e-11,3;CL:0002319,1.46e-11,43;CL:0000710,3.04e-09,1;CL:0002077,3.04e-09,1;CL:0005014,3.04e-09,1;CL:0002315,3.04e-09,1;CL:0002490,3.04e-09,1;CL:0002321,9.96e-09,70;CL:0000540,1.06e-08,33;CL:0000047,1.06e-08,33;CL:0000031,1.06e-08,33;CL:0000404,1.06e-08,33;CL:0000393,2.52e-07,39;CL:0000211,2.52e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.32e-16!102;UBERON:0000924!1.32e-16!102;UBERON:0006601!1.32e-16!102;UBERON:0000010!2.48e-14!11;UBERON:0002410!6.09e-12!9;UBERON:0000073!6.64e-11!75;UBERON:0001016!6.64e-11!75;UBERON:0001017!1.79e-09!73;UBERON:0005743!1.79e-09!73;UBERON:0002342!5.67e-08!10;UBERON:0005062!5.67e-08!10;UBERON:0002346!1.22e-07!71;UBERON:0003075!1.22e-07!71;UBERON:0007284!1.22e-07!71;UBERON:0002298!1.96e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000010,2.31e-46,11;UBERON:0002410,3.07e-32,9;UBERON:0000011,2.12e-25,3;UBERON:0000013,1.55e-11,3;UBERON:0001016,5.23e-10,75;UBERON:0004121,1.73e-09,95;UBERON:0000924,1.73e-09,95;UBERON:0006601,1.73e-09,95|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0,0,0.883474163806454,0,0,0,0,0.383062014255563,0.768032666281217,0,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.916789486660861,0.294628585473668,0.427115042397309,0,1.13589289999776,4.23200736597999,0,0,0,0,0,0,0,0,0,0,1.83096445709685,0,0,0,0,0,0,0,0,0.29688427812965,0.173485326766136,0.913396434936424,0.230615497256059,0.452167921657868,0,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0.599162557619291,0.915001205637253,0,0.347648640384553,0,0.83115217823824,0.324482526135515,0.101839363850316,0,0,0,0,0.689706313300419,0.180062129805349,0.150704817835715,0.0680364991513279,0.2562274405697,0,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0,0,0,0,0.630869845692382,0,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,1.17211686592203,0,0,0.94652465824877,2.73307121007647,0.861693590931196,5.01834475700359,4.01037613348309,3.11384183867716,2.42886421004937,1.75353514746787,0.790575555893047,0.321321316421807,0,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0.32977250588296,0.161464426695906,0.0603129249281559,0.238744688006273,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03552062350364,0,0.399024873401031,0,0,0,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.17230640686684,0,0,0.192909220463705,0,0,0.342869252385415,0.354951612318675,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0.271608227691724,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0.231867835620421|short_description=p9@Insc}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=233752 | |||
|HGNC= | |||
|MCL_coexpression_id=107 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z267 | |||
|association_with_transcript=-56bp_to_ENSMUST00000136645_5end | |||
|cluster_id=chr7:121889188..121889197,+ | |||
|description=CAGE_peak_9_at_Insc_5end | |||
|id=chr7:121889188..121889197,+ | |||
|ontology_enrichment_celltype=CL:0000107!6.09e-12!9;CL:0000221!2.22e-10!44;CL:0000133!2.22e-10!44;CL:0002319!1.46e-09!43;CL:0000540!4.73e-09!33;CL:0000047!4.73e-09!33;CL:0000031!4.73e-09!33;CL:0000404!4.73e-09!33;CL:0000055!3.13e-07!50;CL:0000393!9.08e-07!39;CL:0000211!9.08e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,3.07e-32,9;CL:0000217,5.72e-17,2;CL:0000328,5.72e-17,2;CL:0002573,5.72e-17,2;CL:0002376,5.72e-17,2;CL:0000218,5.72e-17,2;CL:0000692,5.72e-17,2;CL:0002377,5.72e-17,2;CL:0002375,5.72e-17,2;CL:0000221,2.82e-14,44;CL:0000133,2.82e-14,44;CL:0000215,1.21e-11,3;CL:0002319,1.46e-11,43;CL:0000710,3.04e-09,1;CL:0002077,3.04e-09,1;CL:0005014,3.04e-09,1;CL:0002315,3.04e-09,1;CL:0002490,3.04e-09,1;CL:0002321,9.96e-09,70;CL:0000540,1.06e-08,33;CL:0000047,1.06e-08,33;CL:0000031,1.06e-08,33;CL:0000404,1.06e-08,33;CL:0000393,2.52e-07,39;CL:0000211,2.52e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.32e-16!102;UBERON:0000924!1.32e-16!102;UBERON:0006601!1.32e-16!102;UBERON:0000010!2.48e-14!11;UBERON:0002410!6.09e-12!9;UBERON:0000073!6.64e-11!75;UBERON:0001016!6.64e-11!75;UBERON:0001017!1.79e-09!73;UBERON:0005743!1.79e-09!73;UBERON:0002342!5.67e-08!10;UBERON:0005062!5.67e-08!10;UBERON:0002346!1.22e-07!71;UBERON:0003075!1.22e-07!71;UBERON:0007284!1.22e-07!71;UBERON:0002298!1.96e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,2.31e-46,11;UBERON:0002410,3.07e-32,9;UBERON:0000011,2.12e-25,3;UBERON:0000013,1.55e-11,3;UBERON:0001016,5.23e-10,75;UBERON:0004121,1.73e-09,95;UBERON:0000924,1.73e-09,95;UBERON:0006601,1.73e-09,95 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0,0,0.883474163806454,0,0,0,0,0.383062014255563,0.768032666281217,0,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.916789486660861,0.294628585473668,0.427115042397309,0,1.13589289999776,4.23200736597999,0,0,0,0,0,0,0,0,0,0,1.83096445709685,0,0,0,0,0,0,0,0,0.29688427812965,0.173485326766136,0.913396434936424,0.230615497256059,0.452167921657868,0,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0.599162557619291,0.915001205637253,0,0.347648640384553,0,0.83115217823824,0.324482526135515,0.101839363850316,0,0,0,0,0.689706313300419,0.180062129805349,0.150704817835715,0.0680364991513279,0.2562274405697,0,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0,0,0,0,0.630869845692382,0,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,1.17211686592203,0,0,0.94652465824877,2.73307121007647,0.861693590931196,5.01834475700359,4.01037613348309,3.11384183867716,2.42886421004937,1.75353514746787,0.790575555893047,0.321321316421807,0,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0.32977250588296,0.161464426695906,0.0603129249281559,0.238744688006273,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03552062350364,0,0.399024873401031,0,0,0,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.17230640686684,0,0,0.192909220463705,0,0,0.342869252385415,0.354951612318675,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0.271608227691724,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0.231867835620421 | |||
|short_description=p9@Insc | |||
}} |
Latest revision as of 18:32, 25 September 2015
Short description: | p9@Insc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Insc_5end |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | -56bp_to_ENSMUST00000136645_5end |
EntrezGene: | Insc |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 3.07e-32 | 9 |
insulating cell | 5.72e-17 | 2 |
myelin accumulating cell | 5.72e-17 | 2 |
Schwann cell | 5.72e-17 | 2 |
non-myelinating Schwann cell | 5.72e-17 | 2 |
myelinating Schwann cell;;Schwann cell | 5.72e-17 | 2 |
terminal Schwann cell | 5.72e-17 | 2 |
immature Schwann cell | 5.72e-17 | 2 |
Schwann cell precursor | 5.72e-17 | 2 |
ectodermal cell | 2.82e-14 | 44 |
neurectodermal cell | 2.82e-14 | 44 |
barrier cell | 1.21e-11 | 3 |
neural cell | 1.46e-11 | 43 |
neurecto-epithelial cell | 3.04e-09 | 1 |
ecto-epithelial cell | 3.04e-09 | 1 |
auditory epithelial support cell | 3.04e-09 | 1 |
supporting cell of cochlea | 3.04e-09 | 1 |
organ of Corti supporting cell | 3.04e-09 | 1 |
embryonic cell | 9.96e-09 | 70 |
neuron | 1.06e-08 | 33 |
neuronal stem cell | 1.06e-08 | 33 |
neuroblast | 1.06e-08 | 33 |
electrically signaling cell | 1.06e-08 | 33 |
electrically responsive cell | 2.52e-07 | 39 |
electrically active cell | 2.52e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 2.31e-46 | 11 |
autonomic nervous system | 3.07e-32 | 9 |
parasympathetic nervous system | 2.12e-25 | 3 |
sympathetic nervous system | 1.55e-11 | 3 |
nervous system | 5.23e-10 | 75 |
ectoderm-derived structure | 1.73e-09 | 95 |
ectoderm | 1.73e-09 | 95 |
presumptive ectoderm | 1.73e-09 | 95 |