FFCP PHASE1:Mm9::chr16:78302020..78302049,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13052 | |EntrezGene=13052 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=99 | |MCL_coexpression_id=99 | ||
|TSSclassifier=NA | |||
|UniProt=P97792 | |UniProt=P97792 | ||
|association_with_transcript=19bp_to_ENSMUST00000114229_5end | |association_with_transcript=19bp_to_ENSMUST00000114229_5end | ||
|cluster_id=chr16:78302020..78302049,+ | |||
|description=CAGE_peak_3_at_Cxadr_5end | |description=CAGE_peak_3_at_Cxadr_5end | ||
|id=chr16:78302020..78302049,+ | |id=chr16:78302020..78302049,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.12e-07!25 | |ontology_enrichment_celltype=CL:0000066!1.12e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.40e-15,25;CL:0000223,2.38e-11,20;CL:0002563,2.57e-11,9;CL:0002251,2.57e-11,9;CL:0000239,1.56e-10,6;CL:0000677,1.56e-10,6;CL:0000584,1.56e-10,6;CL:0000075,7.45e-09,7;CL:0002321,8.37e-08,70;CL:0002076,1.68e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.70e-11!43;UBERON:0005409!1.86e-10!59;UBERON:0000344!2.56e-10!15;UBERON:0001242!4.06e-09!13;UBERON:0000060!4.06e-09!13;UBERON:0001262!4.06e-09!13;UBERON:0004786!4.06e-09!13;UBERON:0000485!2.76e-07!11 | |ontology_enrichment_uberon=UBERON:0000160!4.70e-11!43;UBERON:0005409!1.86e-10!59;UBERON:0000344!2.56e-10!15;UBERON:0001242!4.06e-09!13;UBERON:0000060!4.06e-09!13;UBERON:0001262!4.06e-09!13;UBERON:0004786!4.06e-09!13;UBERON:0000485!2.76e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.91e-19,15;UBERON:0001242,1.22e-16,13;UBERON:0001262,1.22e-16,13;UBERON:0004786,1.22e-16,13;UBERON:0000160,3.32e-15,31;UBERON:0005409,1.32e-13,47;UBERON:0003350,2.57e-11,9;UBERON:0004808,2.57e-11,9;UBERON:0001277,2.57e-11,9;UBERON:0000485,4.47e-11,11;UBERON:0004923,1.84e-10,24;UBERON:0001007,1.76e-07,116;UBERON:0001555,1.76e-07,116;UBERON:0007026,1.76e-07,116;UBERON:0004119,3.36e-07,118;UBERON:0000925,3.36e-07,118;UBERON:0006595,3.36e-07,118 | |||
|phase1_expression=1.60148847104794,4.18770489167233,2.27499619694768,4.83942738090928,7.51343594919521,5.20425742926858,4.67225281191051,0.258246646883153,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23989391910769,2.52350209173887,1.14846392823004,4.73838195774982,3.23206849028834,4.18051522804023,1.76421090831952,2.88249663851896,0,0,0,2.59966457776147,0.498703936075477,1.63335485009895,0,0,0,0,0,0,1.51076181570693,1.52065396829272,0.550640256485045,3.12956537739216,0,0,0.194429899074283,3.21968769738334,0,0,0,0,0,1.14613375975503,1.03134418455488,0.606949382578793,2.11596391708813,1.26766280701236,0.677689064138264,3.55717918444456,0,0,0,1.49800055259202,0.768436610643109,0.414758449233911,0.405017814995072,0.420649922702764,0.856952953211411,0.220868540951614,0.122490799214954,0.287536413054709,0,0,0.127687338085188,0.153606533256243,0.923204014111357,1.00636407962651,0.52091337055676,0,0,0.30559649555362,1.47314292736834,1.85083185038834,0.745597783301202,0,0,2.31891590961342,2.58127163094416,33.3185953516798,2.69851595818909,1.94932925234301,0.448026887097336,0.702222100658759,0,0,0,0.704217098883403,0,0,0,0.216491041011214,0,1.51657333504435,0.5709193985953,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0.741584903203122,0.289198713839823,0.884610551949874,0,0,0,0,0.292780797011547,0.209446706813455,1.02182822083437,0,0,0,0,0,2.01046963380583,0,0.255715457330331,0,0.324482526135515,0.509196819251581,0.124406970610093,0,0.631325567659422,0.130120442962704,0.919608417733892,0.540186389416048,0.60281927134286,0.204109497453984,0.12811372028485,0.281105173679186,1.03481348295606,0,0,0.351902248327898,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0.284163499395593,0.414251545071004,0.234526059981096,0,0.473489471170421,0.590292695242212,0.154267112887378,0,0,0.233530684734339,0.329119699826961,0.164167464079095,0.56748166682099,0.877199924551994,0.219550115291051,0,0.420579897128254,0.514523061896422,2.31293148088659,1.05780226665418,0,0,0.128867461322093,0,0,0.760902504450237,2.37264530772256,0.823494773620054,1.25667604400135,1.79060824837036,0.58489226135736,2.69645822596266,1.51296634912286,1.99141273254367,0.379335801906163,0.456994050438915,1.1270773567308,0.407302655690628,0.193952487167626,0.280543279561274,0.442655759869801,0.442830443938806,0.156998727841375,0.493588655687202,0.592905254174298,0.333690211432188,0.196558995113203,0.224862112384854,0.405720242777006,0,0.50925170356284,0.287696137450811,0.810676133875177,1.09824565275233,0,0.744281895337007,1.24815069245824,0.252578877947112,1.61457672169721,0.482443521363367,0.554259570499814,0.189491411770485,0.162964976442026,0.169745085775188,0.234690248288502,0.335012514883631,0.476087281772027,0.390267295715598,0.315270288212382,0.44292937929755,0.159454768657487,0.655453258862952,0.172684981865896,0,0,0,0,0.275936746304732,0.481651769963376,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0.963963949265421,0.141940085208269,0.178065603667255,0.488660878060728,0.164970122972535,1.32745138339963,0.728341908464944,0.906970670894253,0.754420319023592,0.295301892880773,0.922305443831782,0.775284879504663,1.45413491791002,0.712994756769443,0.948110273807448,1.05418608574999,0,0,0.36012218806262,0.517434735131018,1.71469628025274,1.24138163549592,1.24858172321449,0.658196082408484,0,0,0.21183207086382,0,0.65954501176592,0.807322133479528,1.08563264870681,1.3130957840345,1.31312719796049,0.874442509889552,0,0,0.206386867963223,0,0,0,0,0,0.279902904647316,0.138199973804424,0.954670618015114,0.474503990371703,0.203319467126849,0.432021363287205,1.25452977608681,1.09181281873089,0.674321731924103,1.32245529160537,1.30877970992015,3.11075935900303,0,0,0,0,0.388902376688095,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0.0897138566094757,0,0.19318959403219,0.750729901804728,0.73260649706906,0,0,0,0.460325236507177,0.572895513439397,0.171853182343688,0,1.5107877947794,0,0,0.906284817968409,0,0.103787347584177,0.399024873401031,0.341467211508268,0.486213434136588,0,0,0.44449345560323,0.618105171716683,0.320919209591815,0.252697211763798,0,0.188626341386076,0.187283014939765,0.384150914429216,0.114870937911227,0.952587382566147,0.231768651889711,0.192909220463705,0.824171801606613,0.294397840268795,0,0.70990322463735,0.238436189947321,0,0.282328141245992,0.338458431566706,0.365855945745545,0,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.309873682371932,0.385813221962283,0.499621155875892,0.233931608445408,0.429742108096597,0.57386499620653,0,0 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|phase1_expression=1.60148847104794,4.18770489167233,2.27499619694768,4.83942738090928,7.51343594919521,5.20425742926858,4.67225281191051,0.258246646883153,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23989391910769,2.52350209173887,1.14846392823004,4.73838195774982,3.23206849028834,4.18051522804023,1.76421090831952,2.88249663851896,0,0,0,2.59966457776147,0.498703936075477,1.63335485009895,0,0,0,0,0,0,1.51076181570693,1.52065396829272,0.550640256485045,3.12956537739216,0,0,0.194429899074283,3.21968769738334,0,0,0,0,0,1.14613375975503,1.03134418455488,0.606949382578793,2.11596391708813,1.26766280701236,0.677689064138264,3.55717918444456,0,0,0,1.49800055259202,0.768436610643109,0.414758449233911,0.405017814995072,0.420649922702764,0.856952953211411,0.220868540951614,0.122490799214954,0.287536413054709,0,0,0.127687338085188,0.153606533256243,0.923204014111357,1.00636407962651,0.52091337055676,0,0,0.30559649555362,1.47314292736834,1.85083185038834,0.745597783301202,0,0,2.31891590961342,2.58127163094416,33.3185953516798,2.69851595818909,1.94932925234301,0.448026887097336,0.702222100658759,0,0,0,0.704217098883403,0,0,0,0.216491041011214,0,1.51657333504435,0.5709193985953,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0.741584903203122,0.289198713839823,0.884610551949874,0,0,0,0,0.292780797011547,0.209446706813455,1.02182822083437,0,0,0,0,0,2.01046963380583,0,0.255715457330331,0,0.324482526135515,0.509196819251581,0.124406970610093,0,0.631325567659422,0.130120442962704,0.919608417733892,0.540186389416048,0.60281927134286,0.204109497453984,0.12811372028485,0.281105173679186,1.03481348295606,0,0,0.351902248327898,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0.284163499395593,0.414251545071004,0.234526059981096,0,0.473489471170421,0.590292695242212,0.154267112887378,0,0,0.233530684734339,0.329119699826961,0.164167464079095,0.56748166682099,0.877199924551994,0.219550115291051,0,0.420579897128254,0.514523061896422,2.31293148088659,1.05780226665418,0,0,0.128867461322093,0,0,0.760902504450237,2.37264530772256,0.823494773620054,1.25667604400135,1.79060824837036,0.58489226135736,2.69645822596266,1.51296634912286,1.99141273254367,0.379335801906163,0.456994050438915,1.1270773567308,0.407302655690628,0.193952487167626,0.280543279561274,0.442655759869801,0.442830443938806,0.156998727841375,0.493588655687202,0.592905254174298,0.333690211432188,0.196558995113203,0.224862112384854,0.405720242777006,0,0.50925170356284,0.287696137450811,0.810676133875177,1.09824565275233,0,0.744281895337007,1.24815069245824,0.252578877947112,1.61457672169721,0.482443521363367,0.554259570499814,0.189491411770485,0.162964976442026,0.169745085775188,0.234690248288502,0.335012514883631,0.476087281772027,0.390267295715598,0.315270288212382,0.44292937929755,0.159454768657487,0.655453258862952,0.172684981865896,0,0,0,0,0.275936746304732,0.481651769963376,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0.963963949265421,0.141940085208269,0.178065603667255,0.488660878060728,0.164970122972535,1.32745138339963,0.728341908464944,0.906970670894253,0.754420319023592,0.295301892880773,0.922305443831782,0.775284879504663,1.45413491791002,0.712994756769443,0.948110273807448,1.05418608574999,0,0,0.36012218806262,0.517434735131018,1.71469628025274,1.24138163549592,1.24858172321449,0.658196082408484,0,0,0.21183207086382,0,0.65954501176592,0.807322133479528,1.08563264870681,1.3130957840345,1.31312719796049,0.874442509889552,0,0,0.206386867963223,0,0,0,0,0,0.279902904647316,0.138199973804424,0.954670618015114,0.474503990371703,0.203319467126849,0.432021363287205,1.25452977608681,1.09181281873089,0.674321731924103,1.32245529160537,1.30877970992015,3.11075935900303,0,0,0,0,0.388902376688095,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0.0897138566094757,0,0.19318959403219,0.750729901804728,0.73260649706906,0,0,0,0.460325236507177,0.572895513439397,0.171853182343688,0,1.5107877947794,0,0,0.906284817968409,0,0.103787347584177,0.399024873401031,0.341467211508268,0.486213434136588,0,0,0.44449345560323,0.618105171716683,0.320919209591815,0.252697211763798,0,0.188626341386076,0.187283014939765,0.384150914429216,0.114870937911227,0.952587382566147,0.231768651889711,0.192909220463705,0.824171801606613,0.294397840268795,0,0.70990322463735,0.238436189947321,0,0.282328141245992,0.338458431566706,0.365855945745545,0,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.309873682371932,0.385813221962283,0.499621155875892,0.233931608445408,0.429742108096597,0.57386499620653,0,0 | ||
|short_description=p3@Cxadr | |short_description=p3@Cxadr | ||
}} | }} |
Latest revision as of 18:37, 25 September 2015
Short description: | p3@Cxadr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cxadr_5end |
Coexpression cluster: | MCL_coexpression_mm9:99 |
Association with transcript: | 19bp_to_ENSMUST00000114229_5end |
EntrezGene: | Cxadr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.40e-15 | 25 |
endodermal cell | 2.38e-11 | 20 |
intestinal epithelial cell | 2.57e-11 | 9 |
epithelial cell of alimentary canal | 2.57e-11 | 9 |
brush border epithelial cell | 1.56e-10 | 6 |
gut absorptive cell | 1.56e-10 | 6 |
enterocyte | 1.56e-10 | 6 |
columnar/cuboidal epithelial cell | 7.45e-09 | 7 |
embryonic cell | 8.37e-08 | 70 |
endo-epithelial cell | 1.68e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.91e-19 | 15 |
intestinal mucosa | 1.22e-16 | 13 |
wall of intestine | 1.22e-16 | 13 |
gastrointestinal system mucosa | 1.22e-16 | 13 |
intestine | 3.32e-15 | 31 |
gastrointestinal system | 1.32e-13 | 47 |
epithelium of mucosa | 2.57e-11 | 9 |
gastrointestinal system epithelium | 2.57e-11 | 9 |
intestinal epithelium | 2.57e-11 | 9 |
simple columnar epithelium | 4.47e-11 | 11 |
organ component layer | 1.84e-10 | 24 |
digestive system | 1.76e-07 | 116 |
digestive tract | 1.76e-07 | 116 |
primitive gut | 1.76e-07 | 116 |
endoderm-derived structure | 3.36e-07 | 118 |
endoderm | 3.36e-07 | 118 |
presumptive endoderm | 3.36e-07 | 118 |