FFCP PHASE1:Mm9::chr10:128346486..128346499,+: Difference between revisions
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|id=chr10:128346486..128346499,+
|short_description=p9@Cd63,p9@LOC100505035
|description=CAGE_peak_9_at_Cd63_5end,CAGE_peak_9_at_LOC100505035_5end
|association_with...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=100505035,12512 | |EntrezGene=100505035,12512 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=P41731,Q549D0 | |UniProt=P41731,Q549D0 | ||
|association_with_transcript=-422bp_to_ENSMUST00000026407,NM_007653,uc007hov.1_5end | |||
|cluster_id=chr10:128346486..128346499,+ | |||
|description=CAGE_peak_9_at_Cd63_5end,CAGE_peak_9_at_LOC100505035_5end | |||
|id=chr10:128346486..128346499,+ | |||
|ontology_enrichment_celltype=CL:0000473!1.04e-07!3;CL:0000627!1.04e-07!3;CL:0000682!1.04e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.00e-23,3;CL:0000239,4.23e-20,6;CL:0000677,4.23e-20,6;CL:0000584,4.23e-20,6;CL:0000066,1.82e-18,25;CL:0000075,2.77e-17,7;CL:0002563,1.61e-13,9;CL:0002251,1.61e-13,9;CL:0002076,2.75e-12,15;CL:0000473,2.11e-10,7;CL:0000223,3.23e-09,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.13e-10!15;UBERON:0002193!1.11e-07!48;UBERON:0001242!2.93e-07!13;UBERON:0000060!2.93e-07!13;UBERON:0001262!2.93e-07!13;UBERON:0004786!2.93e-07!13;UBERON:0002465!2.96e-07!3;UBERON:0004923!4.42e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.49e-23,15;UBERON:0002465,8.23e-22,3;UBERON:0001962,3.12e-15,2;UBERON:0001961,3.12e-15,2;UBERON:0001744,3.12e-15,2;UBERON:0004923,1.35e-14,24;UBERON:0001242,2.45e-14,13;UBERON:0001262,2.45e-14,13;UBERON:0004786,2.45e-14,13;UBERON:0003350,1.61e-13,9;UBERON:0004808,1.61e-13,9;UBERON:0001277,1.61e-13,9;UBERON:0000485,4.07e-11,11;UBERON:0003199,2.06e-08,1;UBERON:0000029,2.89e-08,1;UBERON:0001097,2.89e-08,1;UBERON:0003968,2.89e-08,1;UBERON:0001467,2.89e-08,1 | |||
|phase1_expression=0,2.79180326111489,7.73498706962211,0,0,2.35030980676646,4.20502753071946,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,2.07990149631429,2.06468352960453,6.89078356938024,6.8921919385452,5.17130958446134,0.190023419456374,0.252030129759931,4.21287970245079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0.299600110518405,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,1.28326477414318,0,0,0,0,0,0,1.03575153458869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457556346413045,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0.316011120628178,0.202725215290164,0.102710957164827,0.389762468933385,0,0,0.360586348559907,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0.233753804363138,0,0,0,0.167884616364078,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0.169229215783353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,2.79180326111489,7.73498706962211,0,0,2.35030980676646,4.20502753071946,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,2.07990149631429,2.06468352960453,6.89078356938024,6.8921919385452,5.17130958446134,0.190023419456374,0.252030129759931,4.21287970245079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0.299600110518405,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,1.28326477414318,0,0,0,0,0,0,1.03575153458869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457556346413045,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0.316011120628178,0.202725215290164,0.102710957164827,0.389762468933385,0,0,0.360586348559907,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0.233753804363138,0,0,0,0.167884616364078,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0.169229215783353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p9@Cd63,p9@LOC100505035 | |||
}} | }} |
Latest revision as of 19:30, 25 September 2015
Short description: | p9@Cd63, p9@LOC100505035 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Cd63_5end, CAGE_peak_9_at_LOC100505035_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | -422bp_to_ENSMUST00000026407, NM_007653, uc007hov.1_5end |
EntrezGene: | 100505035,12512 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.00e-23 | 3 |
brush border epithelial cell | 4.23e-20 | 6 |
gut absorptive cell | 4.23e-20 | 6 |
enterocyte | 4.23e-20 | 6 |
epithelial cell | 1.82e-18 | 25 |
columnar/cuboidal epithelial cell | 2.77e-17 | 7 |
intestinal epithelial cell | 1.61e-13 | 9 |
epithelial cell of alimentary canal | 1.61e-13 | 9 |
endo-epithelial cell | 2.75e-12 | 15 |
defensive cell | 2.11e-10 | 7 |
endodermal cell | 3.23e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.49e-23 | 15 |
lymphoid system | 8.23e-22 | 3 |
gut-associated lymphoid tissue | 3.12e-15 | 2 |
mucosa-associated lymphoid tissue | 3.12e-15 | 2 |
lymphoid tissue | 3.12e-15 | 2 |
organ component layer | 1.35e-14 | 24 |
intestinal mucosa | 2.45e-14 | 13 |
wall of intestine | 2.45e-14 | 13 |
gastrointestinal system mucosa | 2.45e-14 | 13 |
epithelium of mucosa | 1.61e-13 | 9 |
gastrointestinal system epithelium | 1.61e-13 | 9 |
intestinal epithelium | 1.61e-13 | 9 |
simple columnar epithelium | 4.07e-11 | 11 |
egg chamber | 2.06e-08 | 1 |
lymph node | 2.89e-08 | 1 |
axillary lymph node | 2.89e-08 | 1 |
peripheral lymph node | 2.89e-08 | 1 |
shoulder | 2.89e-08 | 1 |