FFCP PHASE1:Mm9::chr14:30822115..30822130,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:30822115..30822130,+
|short_description=p5@Chdh
|description=CAGE_peak_5_at_Chdh_5end
|association_with_transcript=-55bp_to_NM_001136240,uc007sup.2_5end
...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=218865 | |EntrezGene=218865 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=652 | |||
|TSSclassifier=NA | |||
|UniProt=Q3TPY4,Q8BJ64 | |UniProt=Q3TPY4,Q8BJ64 | ||
|association_with_transcript=-55bp_to_NM_001136240,uc007sup.2_5end | |||
|cluster_id=chr14:30822115..30822130,+ | |||
|description=CAGE_peak_5_at_Chdh_5end | |||
|id=chr14:30822115..30822130,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!1.97e-13!25;UBERON:0002330!1.97e-13!25;UBERON:0002107!2.54e-13!22;UBERON:0007499!2.54e-13!22;UBERON:0006925!2.54e-13!22;UBERON:0009497!2.54e-13!22;UBERON:0000015!2.54e-13!22;UBERON:0002423!2.54e-13!22;UBERON:0006235!2.54e-13!22;UBERON:0008835!2.54e-13!22;UBERON:0003894!2.54e-13!22;UBERON:0004161!2.54e-13!22;UBERON:0008836!2.54e-13!22;UBERON:0009854!3.64e-12!23;UBERON:0009856!3.64e-12!23;UBERON:0005172!7.69e-12!49;UBERON:0005173!7.69e-12!49;UBERON:0002417!7.69e-12!49;UBERON:0000916!7.69e-12!49;UBERON:0003929!1.34e-09!55;UBERON:0000949!7.07e-08!72;UBERON:0005057!9.49e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.84e-17,22;UBERON:0007499,1.84e-17,22;UBERON:0006925,1.84e-17,22;UBERON:0009497,1.84e-17,22;UBERON:0000015,1.84e-17,22;UBERON:0002423,1.84e-17,22;UBERON:0006235,1.84e-17,22;UBERON:0008835,1.84e-17,22;UBERON:0003894,1.84e-17,22;UBERON:0004161,1.84e-17,22;UBERON:0008836,1.84e-17,22;UBERON:0009854,2.15e-16,23;UBERON:0009856,2.15e-16,23;UBERON:0002365,4.43e-16,25;UBERON:0002330,4.43e-16,25;UBERON:0005172,6.98e-13,49;UBERON:0005173,6.98e-13,49;UBERON:0002417,6.98e-13,49;UBERON:0000916,6.98e-13,49;UBERON:0003104,2.36e-09,61;UBERON:0009142,2.36e-09,61;UBERON:0005177,9.60e-08,79;UBERON:0009569,2.97e-07,66;UBERON:0003929,3.77e-07,55;UBERON:0005256,8.71e-07,45 | |||
|phase1_expression=0,0.348975407639361,1.36499771816861,0.90739263392049,1.00179145989269,0.671517087647559,0.934450562382103,0.129123323441576,0,0,0,0,0,0,0,0,0.699561878128147,0,0.137114433605739,0,2.04103896362567,0,0,0.799962113967033,0,0,0.430761996159075,0,1.14014051673824,0,0,0,0,0,0.288851619751275,0.166234645358492,0.612508068787107,0,1.5626706890476,0,0,0,0,0,0,0,0,1.30815093828268,3.07560655828261,4.08302788055995,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.127687338085188,1.0752457327937,0,0,0,1.11673199600552,0.56276261003168,1.06958773443767,0,0.142371680799103,0,0.302904773332736,0,1.44932244350839,1.72084775396277,4.0798280022465,10.7940638327563,9.74664626171504,7.16843019355737,5.33688796500657,0,0,0,0.985903938436763,0,0,0,0,0,0,4.45317130904334,0,0.29688427812965,0,0.913396434936424,0.461230994512117,0.150722640552623,0.117588707135705,1.50799909595611,1.23597483867187,2.74738778147832,0,0,0,0.484875253135222,0,0.292780797011547,0.41889341362691,1.02182822083437,1.67741174308288,1.19980546198682,2.41433431438823,0.748953197024114,0.457500602818626,0.125654352112864,0.173824320192276,0,1.87009240103604,0.324482526135515,0.509196819251581,0.995255764880744,0.252722758433675,1.68353484709179,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0,0,1.54408744268829,2.84163499395593,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,0.210289948564127,0.308713837137853,0.660837565967596,0.264450566663544,0,0,0.128867461322093,0,0.444756087689741,0.380451252225118,0.474529061544512,0.329397909448022,0,0.198956472041151,0.19496408711912,0.898819408654221,0,0.199141273254367,0.189667900953082,0.571242563048644,1.1270773567308,2.8511185898344,2.32742984601151,4.55882829287071,6.0707075639287,11.0707610984702,8.94892748695836,10.2419646055094,10.6722945751374,0.333690211432188,0.786235980452812,0.899448449539415,2.02860121388503,4.58236603529592,4.83789118384698,7.19240343627027,2.10775794807546,5.49122826376163,17.2521847832825,14.8856379067401,8.7370548472077,9.59799736199025,10.225652570749,10.1313139486307,0,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0.163863314715738,0,0.289298117163023,0,0,0.491764273019036,1.37968373152366,0.642202359951168,1.99259867206745,0,0.504941854408746,0,0,0,0.238968797952552,0,0,0,0,0,0,1.56134093729095,0.35613120733451,0.488660878060728,2.63952196756057,2.65490276679926,0.242780636154981,0.604647113929502,0.188605079755898,0,0.614870295887855,0.258428293168221,1.45413491791002,0.712994756769443,1.8962205476149,4.21674434299995,1.03135543248187,1.02131881726136,0,0,0,0,0,0.658196082408484,0.304464949114599,0.704015124191131,0.21183207086382,0.661585194164886,0.49465875882444,0,0.422190474497091,0,0.164140899745061,1.1659233465194,2.03967832211561,0,0,0,0.188368457004691,0.136694227721025,0.228778173206523,0.509935289981566,0.839708713941948,0.552799895217695,0,0,0,0.108005340821801,0,0.436725127492355,0.674321731924103,1.32245529160537,0.785267825952089,0.259229946583586,0.621339313086926,0,0.598066184175915,1.15820943319968,2.13896307178452,1.54991788173277,1.18269287843545,1.17357238645754,0.651021924219751,0.734015410979976,0.241584120826006,0.576060012515731,1.58005560314089,1.01362607645082,0.513554785824136,0.909445760844565,0.895133478337407,0.596044064343795,1.20195449519969,0.738447635872886,0.807731599585181,0.609654453239999,0.604957110821043,0.974578807397524,1.15454209968395,1.05189211963412,0,0,0,0,0,0.93841237725591,2.01466786693992,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0.399024873401031,0.341467211508268,0.243106717068294,0,1.83843508450014,1.11123363900808,0.824140228955577,0.962757628775446,1.76888048234658,0.760437899670719,1.32038438970253,1.21733959710847,1.02440243847791,0.459483751644906,1.90517476513229,1.50649623728312,0.964546102318525,0.412085900803307,0.883193520806384,1.37147700954166,1.24233064311536,1.1921809497366,0.726732083161643,0.846984423737976,1.01537529470012,0.914639864363863,1.31534855718921,0.950628796921032,2.80571135828869,1.06771516311757,0.689531376628944,0.818462086339379,0.619747364743864,0.964533054905707,0,1.16965804222704,1.07435527024149,0.191288332068843,0.441182838239031,0.695603506861264 | |phase1_expression=0,0.348975407639361,1.36499771816861,0.90739263392049,1.00179145989269,0.671517087647559,0.934450562382103,0.129123323441576,0,0,0,0,0,0,0,0,0.699561878128147,0,0.137114433605739,0,2.04103896362567,0,0,0.799962113967033,0,0,0.430761996159075,0,1.14014051673824,0,0,0,0,0,0.288851619751275,0.166234645358492,0.612508068787107,0,1.5626706890476,0,0,0,0,0,0,0,0,1.30815093828268,3.07560655828261,4.08302788055995,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.127687338085188,1.0752457327937,0,0,0,1.11673199600552,0.56276261003168,1.06958773443767,0,0.142371680799103,0,0.302904773332736,0,1.44932244350839,1.72084775396277,4.0798280022465,10.7940638327563,9.74664626171504,7.16843019355737,5.33688796500657,0,0,0,0.985903938436763,0,0,0,0,0,0,4.45317130904334,0,0.29688427812965,0,0.913396434936424,0.461230994512117,0.150722640552623,0.117588707135705,1.50799909595611,1.23597483867187,2.74738778147832,0,0,0,0.484875253135222,0,0.292780797011547,0.41889341362691,1.02182822083437,1.67741174308288,1.19980546198682,2.41433431438823,0.748953197024114,0.457500602818626,0.125654352112864,0.173824320192276,0,1.87009240103604,0.324482526135515,0.509196819251581,0.995255764880744,0.252722758433675,1.68353484709179,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0,0,1.54408744268829,2.84163499395593,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,0.210289948564127,0.308713837137853,0.660837565967596,0.264450566663544,0,0,0.128867461322093,0,0.444756087689741,0.380451252225118,0.474529061544512,0.329397909448022,0,0.198956472041151,0.19496408711912,0.898819408654221,0,0.199141273254367,0.189667900953082,0.571242563048644,1.1270773567308,2.8511185898344,2.32742984601151,4.55882829287071,6.0707075639287,11.0707610984702,8.94892748695836,10.2419646055094,10.6722945751374,0.333690211432188,0.786235980452812,0.899448449539415,2.02860121388503,4.58236603529592,4.83789118384698,7.19240343627027,2.10775794807546,5.49122826376163,17.2521847832825,14.8856379067401,8.7370548472077,9.59799736199025,10.225652570749,10.1313139486307,0,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0.163863314715738,0,0.289298117163023,0,0,0.491764273019036,1.37968373152366,0.642202359951168,1.99259867206745,0,0.504941854408746,0,0,0,0.238968797952552,0,0,0,0,0,0,1.56134093729095,0.35613120733451,0.488660878060728,2.63952196756057,2.65490276679926,0.242780636154981,0.604647113929502,0.188605079755898,0,0.614870295887855,0.258428293168221,1.45413491791002,0.712994756769443,1.8962205476149,4.21674434299995,1.03135543248187,1.02131881726136,0,0,0,0,0,0.658196082408484,0.304464949114599,0.704015124191131,0.21183207086382,0.661585194164886,0.49465875882444,0,0.422190474497091,0,0.164140899745061,1.1659233465194,2.03967832211561,0,0,0,0.188368457004691,0.136694227721025,0.228778173206523,0.509935289981566,0.839708713941948,0.552799895217695,0,0,0,0.108005340821801,0,0.436725127492355,0.674321731924103,1.32245529160537,0.785267825952089,0.259229946583586,0.621339313086926,0,0.598066184175915,1.15820943319968,2.13896307178452,1.54991788173277,1.18269287843545,1.17357238645754,0.651021924219751,0.734015410979976,0.241584120826006,0.576060012515731,1.58005560314089,1.01362607645082,0.513554785824136,0.909445760844565,0.895133478337407,0.596044064343795,1.20195449519969,0.738447635872886,0.807731599585181,0.609654453239999,0.604957110821043,0.974578807397524,1.15454209968395,1.05189211963412,0,0,0,0,0,0.93841237725591,2.01466786693992,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0.399024873401031,0.341467211508268,0.243106717068294,0,1.83843508450014,1.11123363900808,0.824140228955577,0.962757628775446,1.76888048234658,0.760437899670719,1.32038438970253,1.21733959710847,1.02440243847791,0.459483751644906,1.90517476513229,1.50649623728312,0.964546102318525,0.412085900803307,0.883193520806384,1.37147700954166,1.24233064311536,1.1921809497366,0.726732083161643,0.846984423737976,1.01537529470012,0.914639864363863,1.31534855718921,0.950628796921032,2.80571135828869,1.06771516311757,0.689531376628944,0.818462086339379,0.619747364743864,0.964533054905707,0,1.16965804222704,1.07435527024149,0.191288332068843,0.441182838239031,0.695603506861264 | ||
|short_description=p5@Chdh | |||
}} | }} |
Latest revision as of 20:37, 25 September 2015
Short description: | p5@Chdh |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Chdh_5end |
Coexpression cluster: | MCL_coexpression_mm9:652 |
Association with transcript: | -55bp_to_NM_001136240, uc007sup.2_5end |
EntrezGene: | Chdh |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 1.84e-17 | 22 |
epithelial sac | 1.84e-17 | 22 |
digestive gland | 1.84e-17 | 22 |
epithelium of foregut-midgut junction | 1.84e-17 | 22 |
anatomical boundary | 1.84e-17 | 22 |
hepatobiliary system | 1.84e-17 | 22 |
foregut-midgut junction | 1.84e-17 | 22 |
hepatic diverticulum | 1.84e-17 | 22 |
liver primordium | 1.84e-17 | 22 |
septum transversum | 1.84e-17 | 22 |
liver bud | 1.84e-17 | 22 |
digestive tract diverticulum | 2.15e-16 | 23 |
sac | 2.15e-16 | 23 |
exocrine gland | 4.43e-16 | 25 |
exocrine system | 4.43e-16 | 25 |
abdomen element | 6.98e-13 | 49 |
abdominal segment element | 6.98e-13 | 49 |
abdominal segment of trunk | 6.98e-13 | 49 |
abdomen | 6.98e-13 | 49 |
mesenchyme | 2.36e-09 | 61 |
entire embryonic mesenchyme | 2.36e-09 | 61 |
trunk region element | 9.60e-08 | 79 |
subdivision of trunk | 2.97e-07 | 66 |
gut epithelium | 3.77e-07 | 55 |
trunk mesenchyme | 8.71e-07 | 45 |