FFCP PHASE1:Mm9::chr5:24414581..24414595,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:24414581..24414595,-
|short_description=p14@Prkag2
|description=CAGE_peak_14_at_Prkag2_5end
|association_with_transcript=-254bp_to_ENSMUST00000150135,NM_00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=108099 | |EntrezGene=108099 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=D3YUS1,Q8BIQ9,Q3TMN8,Q91WG5 | |UniProt=D3YUS1,Q8BIQ9,Q3TMN8,Q91WG5 | ||
|association_with_transcript=-254bp_to_ENSMUST00000150135,NM_001170555,NM_001170556,uc008wsk.2,uc008wsn.2,uc012dtj.1_5end | |||
|cluster_id=chr5:24414581..24414595,- | |||
|description=CAGE_peak_14_at_Prkag2_5end | |||
|id=chr5:24414581..24414595,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.00e-10,9;CL:0002251,1.00e-10,9;CL:0000239,2.46e-09,6;CL:0000677,2.46e-09,6;CL:0000584,2.46e-09,6;CL:0000075,6.38e-08,7;CL:0000682,3.24e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.70e-07,3;DOID:4045,4.70e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000344!7.97e-10!15;UBERON:0001242!1.43e-08!13;UBERON:0000060!1.43e-08!13;UBERON:0001262!1.43e-08!13;UBERON:0004786!1.43e-08!13;UBERON:0005409!2.06e-07!59;UBERON:0004923!9.62e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.29e-21,15;UBERON:0001242,1.07e-17,13;UBERON:0001262,1.07e-17,13;UBERON:0004786,1.07e-17,13;UBERON:0000160,1.56e-17,31;UBERON:0004923,4.05e-12,24;UBERON:0005409,2.38e-11,47;UBERON:0003350,1.00e-10,9;UBERON:0004808,1.00e-10,9;UBERON:0001277,1.00e-10,9;UBERON:0000485,1.48e-08,11;UBERON:0000331,8.16e-07,3;UBERON:0002116,8.16e-07,3;UBERON:0001204,8.16e-07,3;UBERON:0001168,8.16e-07,3 | |||
|phase1_expression=0.480446541314382,1.39590163055744,3.63999391511629,6.95667686005709,5.00895729946347,2.18243053485457,0.700837921786577,0.129123323441576,0,0,0,0.0797721589953364,0.684802919724823,0.611942816932982,0,0,0,0.157731082679119,0.137114433605739,0,0.255129870453209,0.496454756004426,0,1.75991665072747,2.2940928106717,2.8711598205751,2.15380998079537,1.72376986148711,1.90023419456374,3.2763916868791,1.10865255327652,0.635030673459631,0,0,1.1554064790051,1.16364251750945,0.816677425049476,2.09265815368454,2.3440060335714,1.57057123192139,0.588231488031014,1.36609096991689,0,0.503587271902309,1.11514624341466,0.183546752161682,0,0.436050312760893,1.09843091367236,0.388859798148567,0.699932108126813,0,0.503347818173209,0,1.00828139742739,0.514518872071894,0,0.515672092277442,0.202316460859598,1.05798195854407,0,0.338844532069132,0,0,0,0,0.599200221036809,0.384218305321555,0.518448061542388,0.540023753326763,0.210324961351382,0.285650984403804,0.883474163806454,0.367472397644862,0.383381884072945,0,0,0.383062014255563,0.307213066512487,0.263772575460388,0.182975287204819,0,0,0,0.30559649555362,0,0.569486723196412,0,0.075726193333184,0.151143120213571,0.289864488701678,0,0,0,0,0,0.702222100658759,0.511290967734173,0.779358013808606,0,0.422530259330042,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0.45673551887624,0.517875767294343,0.593768556259299,0.173485326766136,0,0,0,0.470354828542819,0.376999773989026,0,0.289198713839823,0,0.647067399789637,0.441683036920787,0.969750506270444,1.86391761218122,0.585561594023094,0.83778682725382,1.02182822083437,0.599075622529601,1.19980546198682,0.508280908292259,0.299581278809645,1.83000241127451,1.25654352112864,0.173824320192276,0.511430914660661,0,0.648965052271031,0.203678727700633,0.124406970610093,0.505445516867349,0,0,0.229902104433473,0.360124259610698,0.452114453507145,0.204109497453984,0,0.468508622798644,0.258703370739016,0.431135985865684,0.189106080167819,0.175951124163949,0.43839146485515,0.556094498451196,0.348252166522167,0.411564272815887,0,0.702213187313235,0,0,0.828503090142008,1.17263029990548,1.98068267607116,0.710234206755631,0.983821158737019,0.308534225774757,0.930135779001631,1.60964040839772,0.583826711835847,0.658239399653922,1.64167464079095,0.648550476366846,0.730999937126662,0.658650345873152,0.805238512562231,0.630869845692382,0.514523061896422,2.64335026387038,0.528901133327089,0,0.232236671860439,0.38660238396628,0.201683524623343,0.22237804384487,0.570676878337677,1.42358718463353,0.823494773620054,1.25667604400135,0.596869416123452,0.58489226135736,2.69645822596266,1.72910439899755,2.98711909881551,0.189667900953082,0.228497025219458,0,0,0.775809948670503,0.420814919341911,0.505892296994058,0.295220295959204,0.31399745568275,0.246794327843601,0.296452627087149,0.166845105716094,0,0.224862112384854,0,0.241177159752417,0,0,0,0,1.43768206527355,0.372140947668503,0,0.252578877947112,0,0,0.554259570499814,0,0.162964976442026,0.509235257325564,0.234690248288502,0.502518772325447,0.238043640886014,0.390267295715598,0.630540576424764,0.8858587585951,1.43509291791738,0.655453258862952,0.690739927463582,0.433947175744535,0,0,0.491764273019036,0.551873492609465,0.481651769963376,0.468846746368813,0.327869890753351,0.252470927204373,0,0.390438744296638,0,0.477937595905104,0,0,0.404810701674894,0.292255857911312,0,0.642642632843614,0.99358059645788,0.890328018336276,0.162886959353576,0.989820737835213,0,0.242780636154981,0.604647113929502,0.188605079755898,0,0,0.516856586336442,0.363533729477506,0.712994756769443,0.316036757935816,1.05418608574999,0,0,0,0.129358683782755,0.428674070063185,0,0.178368817602071,0.987294123612726,0.304464949114599,0.469343416127421,0.847328283455281,0.441056796109924,0.98931751764888,0.322928853391811,0.241251699712623,0.596861720015682,0.820704498725306,0.291480836629851,0.741701208042039,0.512612642393558,0.412773735926445,0.370389054739423,0,0.546776910884101,0.228778173206523,0.169978429993855,0.69975726161829,0.276399947608848,0.954670618015114,0.316335993581135,0.406638934253697,0.324016022465404,0.836353184057875,0.87345025498471,0.809186078308924,0.743881101528023,0.523511883968059,1.68499465279331,0.621339313086926,0,0,0.330916980914195,0.583353565032143,0.904118764344118,0,0.117357238645754,0.2604087696879,0.209718688851422,0,0.576060012515731,0.632022241256357,0.608175645870493,0.308132871494482,0.129920822977795,0.716106782669926,0.198681354781265,0.600977247599844,0.147689527174577,0.201932899896295,0.228620419965,0,0.292373642219257,0.192423683280659,0,0.906921534460845,0,0.269141569828427,0,1.54551675225752,1.12609485270709,0.73260649706906,1.07184189539533,0,0,0,0,0.515559547031063,0,0,0.675022500231806,0.45032120322422,0,1.03552062350364,0.207574695168353,0.399024873401031,0,0.243106717068294,0.419226325255965,0,0.44449345560323,0.206035057238894,0.320919209591815,1.01078884705519,0.25347929989024,0.377252682772152,0.187283014939765,0.320125762024346,0.402048282689293,0.9525873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| |phase1_expression=0.480446541314382,1.39590163055744,3.63999391511629,6.95667686005709,5.00895729946347,2.18243053485457,0.700837921786577,0.129123323441576,0,0,0,0.0797721589953364,0.684802919724823,0.611942816932982,0,0,0,0.157731082679119,0.137114433605739,0,0.255129870453209,0.496454756004426,0,1.75991665072747,2.2940928106717,2.8711598205751,2.15380998079537,1.72376986148711,1.90023419456374,3.2763916868791,1.10865255327652,0.635030673459631,0,0,1.1554064790051,1.16364251750945,0.816677425049476,2.09265815368454,2.3440060335714,1.57057123192139,0.588231488031014,1.36609096991689,0,0.503587271902309,1.11514624341466,0.183546752161682,0,0.436050312760893,1.09843091367236,0.388859798148567,0.699932108126813,0,0.503347818173209,0,1.00828139742739,0.514518872071894,0,0.515672092277442,0.202316460859598,1.05798195854407,0,0.338844532069132,0,0,0,0,0.599200221036809,0.384218305321555,0.518448061542388,0.540023753326763,0.210324961351382,0.285650984403804,0.883474163806454,0.367472397644862,0.383381884072945,0,0,0.383062014255563,0.307213066512487,0.263772575460388,0.182975287204819,0,0,0,0.30559649555362,0,0.569486723196412,0,0.075726193333184,0.151143120213571,0.289864488701678,0,0,0,0,0,0.702222100658759,0.511290967734173,0.779358013808606,0,0.422530259330042,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0.45673551887624,0.517875767294343,0.593768556259299,0.173485326766136,0,0,0,0.470354828542819,0.376999773989026,0,0.289198713839823,0,0.647067399789637,0.441683036920787,0.969750506270444,1.86391761218122,0.585561594023094,0.83778682725382,1.02182822083437,0.599075622529601,1.19980546198682,0.508280908292259,0.299581278809645,1.83000241127451,1.25654352112864,0.173824320192276,0.511430914660661,0,0.648965052271031,0.203678727700633,0.124406970610093,0.505445516867349,0,0,0.229902104433473,0.360124259610698,0.452114453507145,0.204109497453984,0,0.468508622798644,0.258703370739016,0.431135985865684,0.189106080167819,0.175951124163949,0.43839146485515,0.556094498451196,0.348252166522167,0.411564272815887,0,0.702213187313235,0,0,0.828503090142008,1.17263029990548,1.98068267607116,0.710234206755631,0.983821158737019,0.308534225774757,0.930135779001631,1.60964040839772,0.583826711835847,0.658239399653922,1.64167464079095,0.648550476366846,0.730999937126662,0.658650345873152,0.805238512562231,0.630869845692382,0.514523061896422,2.64335026387038,0.528901133327089,0,0.232236671860439,0.38660238396628,0.201683524623343,0.22237804384487,0.570676878337677,1.42358718463353,0.823494773620054,1.25667604400135,0.596869416123452,0.58489226135736,2.69645822596266,1.72910439899755,2.98711909881551,0.189667900953082,0.228497025219458,0,0,0.775809948670503,0.420814919341911,0.505892296994058,0.295220295959204,0.31399745568275,0.246794327843601,0.296452627087149,0.166845105716094,0,0.224862112384854,0,0.241177159752417,0,0,0,0,1.43768206527355,0.372140947668503,0,0.252578877947112,0,0,0.554259570499814,0,0.162964976442026,0.509235257325564,0.234690248288502,0.502518772325447,0.238043640886014,0.390267295715598,0.630540576424764,0.8858587585951,1.43509291791738,0.655453258862952,0.690739927463582,0.433947175744535,0,0,0.491764273019036,0.551873492609465,0.481651769963376,0.468846746368813,0.327869890753351,0.252470927204373,0,0.390438744296638,0,0.477937595905104,0,0,0.404810701674894,0.292255857911312,0,0.642642632843614,0.99358059645788,0.890328018336276,0.162886959353576,0.989820737835213,0,0.242780636154981,0.604647113929502,0.188605079755898,0,0,0.516856586336442,0.363533729477506,0.712994756769443,0.316036757935816,1.05418608574999,0,0,0,0.129358683782755,0.428674070063185,0,0.178368817602071,0.987294123612726,0.304464949114599,0.469343416127421,0.847328283455281,0.441056796109924,0.98931751764888,0.322928853391811,0.241251699712623,0.596861720015682,0.820704498725306,0.291480836629851,0.741701208042039,0.512612642393558,0.412773735926445,0.370389054739423,0,0.546776910884101,0.228778173206523,0.169978429993855,0.69975726161829,0.276399947608848,0.954670618015114,0.316335993581135,0.406638934253697,0.324016022465404,0.836353184057875,0.87345025498471,0.809186078308924,0.743881101528023,0.523511883968059,1.68499465279331,0.621339313086926,0,0,0.330916980914195,0.583353565032143,0.904118764344118,0,0.117357238645754,0.2604087696879,0.209718688851422,0,0.576060012515731,0.632022241256357,0.608175645870493,0.308132871494482,0.129920822977795,0.716106782669926,0.198681354781265,0.600977247599844,0.147689527174577,0.201932899896295,0.228620419965,0,0.292373642219257,0.192423683280659,0,0.906921534460845,0,0.269141569828427,0,1.54551675225752,1.12609485270709,0.73260649706906,1.07184189539533,0,0,0,0,0.515559547031063,0,0,0.675022500231806,0.45032120322422,0,1.03552062350364,0.207574695168353,0.399024873401031,0,0.243106717068294,0.419226325255965,0,0.44449345560323,0.206035057238894,0.320919209591815,1.01078884705519,0.25347929989024,0.377252682772152,0.187283014939765,0.320125762024346,0.402048282689293,0.9525873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| ||
|short_description=p14@Prkag2 | |||
}} | }} |
Latest revision as of 20:55, 25 September 2015
Short description: | p14@Prkag2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Prkag2_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -254bp_to_ENSMUST00000150135, NM_001170555, NM_001170556, uc008wsk.2, uc008wsn.2, uc012dtj.1_5end |
EntrezGene: | Prkag2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.00e-10 | 9 |
epithelial cell of alimentary canal | 1.00e-10 | 9 |
brush border epithelial cell | 2.46e-09 | 6 |
gut absorptive cell | 2.46e-09 | 6 |
enterocyte | 2.46e-09 | 6 |
columnar/cuboidal epithelial cell | 6.38e-08 | 7 |
M cell of gut | 3.24e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.29e-21 | 15 |
intestinal mucosa | 1.07e-17 | 13 |
wall of intestine | 1.07e-17 | 13 |
gastrointestinal system mucosa | 1.07e-17 | 13 |
intestine | 1.56e-17 | 31 |
organ component layer | 4.05e-12 | 24 |
gastrointestinal system | 2.38e-11 | 47 |
epithelium of mucosa | 1.00e-10 | 9 |
gastrointestinal system epithelium | 1.00e-10 | 9 |
intestinal epithelium | 1.00e-10 | 9 |
simple columnar epithelium | 1.48e-08 | 11 |
ileal mucosa | 8.16e-07 | 3 |
ileum | 8.16e-07 | 3 |
mucosa of small intestine | 8.16e-07 | 3 |
wall of small intestine | 8.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.70e-07 | 3 |
muscle cancer | 4.70e-07 | 3 |