FFCP PHASE1:Mm9::chr14:37948339..37948358,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66092 | |EntrezGene=66092 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1132 | |||
|TSSclassifier=NA | |||
|UniProt=Q91VC9 | |UniProt=Q91VC9 | ||
|association_with_transcript=-14bp_to_NM_001199122,uc007tbx.2_5end | |association_with_transcript=-14bp_to_NM_001199122,uc007tbx.2_5end | ||
|cluster_id=chr14:37948339..37948358,- | |||
|description=CAGE_peak_3_at_Ghitm_5end | |description=CAGE_peak_3_at_Ghitm_5end | ||
|id=chr14:37948339..37948358,- | |id=chr14:37948339..37948358,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.50e-08!23;UBERON:0001009!1.50e-08!23;UBERON:0007100!6.11e-08!18;UBERON:0000948!6.11e-08!18;UBERON:0005498!6.11e-08!18;UBERON:0004140!6.11e-08!18;UBERON:0009881!6.11e-08!18;UBERON:0004141!6.11e-08!18;UBERON:0003084!6.11e-08!18;UBERON:0007005!6.11e-08!18;UBERON:0004139!6.11e-08!18;UBERON:0004291!6.11e-08!18;UBERON:0003103!6.99e-08!43;UBERON:0000025!4.66e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.02e-09,92;UBERON:0004535,1.50e-08,23;UBERON:0001009,1.50e-08,23;UBERON:0007100,6.10e-08,18;UBERON:0000948,6.10e-08,18;UBERON:0005498,6.10e-08,18;UBERON:0004140,6.10e-08,18;UBERON:0009881,6.10e-08,18;UBERON:0004141,6.10e-08,18;UBERON:0003084,6.10e-08,18;UBERON:0007005,6.10e-08,18;UBERON:0004139,6.10e-08,18;UBERON:0004291,6.10e-08,18;UBERON:0003103,6.97e-08,43;UBERON:0000025,4.64e-07,114 | |||
|phase1_expression=11.0502704502308,32.8036883180999,45.9549231783431,34.1784558776718,29.0519523368881,8.39396359559449,10.7461814673942,0.258246646883153,2.111830832275,1.63845168425395,1.19852577757853,0.8774937489487,1.02720437958723,0.34968160967599,0.999329285446988,1.61980213911861,0,1.89277299214943,1.09691546884591,1.69755860719212,20.9206493771632,4.26951090163807,3.6567970479451,15.9992422793407,15.8292403936347,22.9692785646008,18.9535278309993,17.8841123129288,10.2612646506442,9.07308467135751,14.4124831925948,0.635030673459631,3.07532393792285,0,2.88851619751275,3.32469290716985,3.67504841272264,1.67412652294763,0.7813353445238,1.0470474879476,0,0,1.45653105909346,9.9458486200706,7.09638518536602,7.52541683862894,7.04152209913235,17.2239873540553,13.4008571468028,18.6652703111312,11.8988458381558,12.9377307928474,3.52343472721246,1.45072428402269,2.01656279485478,10.2903774414379,6.01720223871389,7.21940929188419,5.46254444320914,7.40587370980846,5.07065122804943,3.38844532069132,5.33576877666684,1.3498495759221,1.97773272513395,3.5524005747305,7.78960287347852,9.22123932771731,0.622137673850866,1.08004750665353,1.89292465216244,15.4251531578054,17.0068776532742,1.34739879136449,1.43768206527355,1.83843757322004,29.731287869835,32.0495218593821,28.7244217189175,3.29715719325485,4.39140689291566,2.6045668527838,26.5223849051312,29.2636557216474,29.9484565642548,10.3120004915784,11.8168495063255,4.65998614563251,5.45228591998925,6.65029728939713,13.9134954576805,6.88339101585109,5.439770669662,4.85732872474035,11.0461990966104,9.40856462904405,18.3982190372595,3.40860645156115,3.63700406444016,7.42013106471715,9.43650912503759,6.41632387071589,15.2883143823987,14.2213340630666,5.19578498426914,6.33399663687746,8.08839112023653,13.4736978068491,1.8125651855302,8.75808620482466,5.37804512975021,7.30717147949139,5.30415643688935,8.28974523039424,7.99603208522793,9.67632753238501,9.14621380617183,36.4390379438177,13.2691582792481,9.05894359705491,11.0420759230197,11.6370060752453,5.59175283654366,20.7874365878198,17.5935233723302,6.89734049063197,3.11519323715393,2.39961092397363,2.41433431438823,36.8484972935864,27.9075367719362,6.03140890141749,32.8527965163402,35.0330176542553,31.168206683934,30.1768749306029,4.88828946481518,8.8328949133166,5.30717792710717,10.9429765060966,3.513251959993,4.13823787980251,3.78130472591233,4.21973489940002,6.39543092022482,5.25266253167884,3.84177070694888,6.46758426847539,2.15567992932842,0.378212160335639,1.75951124163949,3.72632745126877,1.11218899690239,4.179025998266,3.08673204611915,0.995171334092466,6.31991868581911,5.1469581422943,5.39910648851626,13.2560494422721,13.3679854189225,16.7457717158744,12.5474709860161,14.7573173810553,18.0492522078233,22.78832658554,30.5831677595566,28.7242742223237,29.456213134513,35.1318373129264,44.9931892979499,40.2049965419664,42.1536221358817,47.643278659932,24.814213930567,7.20332286654991,8.59088835757875,11.1069237998689,1.70630600428187,2.78684006232526,3.73715637834071,7.05892336181699,8.2279876222602,7.79925067061493,9.01605216934572,10.0466362381647,10.304743560811,11.937388322469,8.96834800747953,11.6846523125049,7.3486936957396,9.16049856970089,4.36236172192088,4.56994050438915,4.50830942692322,6.92414514674068,7.5641469995374,12.2036326609154,10.4972651626267,17.1227771656338,18.6828486131236,28.7515391937795,9.19003143970162,1.00107063429656,2.94838492669805,1.34917267430912,3.04290182082754,1.20588579876208,2.80088436959562,5.75392274901621,11.5116011010275,5.21666685057355,10.0637744569148,9.67566463938109,5.92871578917665,6.06189307073068,5.9201146462231,13.0259750768109,8.86815312799702,2.84237117655727,1.14075483509418,2.8856664581782,2.34690248288502,3.01511263395268,5.47500374037832,9.95181604074774,3.94087860265477,5.09368786192182,5.10255259703959,8.52089236521838,8.11619414769709,11.8612228036839,0,2.17562273527484,1.96705709207614,5.51873492609465,43.5092098866916,36.4528345301752,3.27869890753351,47.7170052416265,8.51872192423893,7.02789739733949,5.38558494331997,3.34556317133573,2.89638276307112,3.11384183867716,2.83367491172426,7.59865230569411,5.92931666919785,21.8498495166829,4.11626247103979,4.09550888434687,3.74640006513225,2.96946221350564,1.32745138339963,2.6705869977048,3.32555912661226,3.01768127609437,3.83892460745005,3.3817866273832,8.5281336745513,2.54473610634254,3.56497378384721,1.26414703174326,3.16255825724996,5.15677716240934,3.06395645178409,3.6012218806262,1.29358683782755,2.14337035031592,2.48276327099183,4.28085162244969,4.11372551505302,4.56697423671899,6.10146440965647,9.10877904714427,1.7642271844397,5.27636009412736,5.16686165426898,3.07595917133595,3.58117032009409,2.62625439592098,6.41257840585672,37.6413363081335,0.854354403989263,2.06386867963222,1.29636169158798,1.88368457004691,1.0935538217682,1.60144721244566,5.77926661979108,6.43776680688827,6.90999869022119,10.5013767981662,1.42351197111511,2.03319467126849,3.24016022465404,2.92723614420256,5.02233896616208,4.04593039154462,4.95920734352016,9.6849698534091,9.20266310371729,2.4853572523477,64.8246879486819,2.8408143748356,2.64733584731356,2.72231663681667,4.52059382172059,4.22390313726945,7.27614879603675,4.1665403150064,6.71099804324549,24.1584120826006,35.7157207759753,2.21207784439725,1.82452693761148,1.23253148597793,0.389762468933385,0.895133478337407,0.993406773906324,1.32214994471966,0.738447635872886,2.01932899896295,1.143102099825,1.10908803650525,1.16949456887703,0.769694733122636,1.63627663054197,25.8472637321341,3.99574716073316,3.6782681209885,5.37230772365051,5.21611903886914,5.81815673898664,3.29672923681077,2.78678892802786,2.00628841614145,22.0253218620656,13.3494318587081,18.3326564300607,16.3260523226503,16.4419804744954,25.6833925112498,16.2005400055633,24.3173449741079,19.4851235863208,19.6748918465692,2.49089634202024,3.19219898720825,3.41467211508268,1.94485373654635,2.93458427679175,9.37601893095072,8.88986911206461,10.0957178047058,10.9112531261217,12.6348605881899,12.1670063947315,9.61994341068989,6.83583004530142,9.795848317945,7.12199815049605,9.52587382566147,8.11190281613988,10.2241886845764,14.4230065281157,11.0399190100798,6.51451579532289,10.2935967572416,10.2527561677348,10.4649419975277,9.41093804153306,10.9998990259179,9.69518256225695,9.99664903463803,8.55565917228929,12.3451299764702,7.82991119619549,6.99381824866501,11.867700251921,9.76102099471586,8.29498427218908,5.24602213669686,9.82512755470715,13.5368764050428,20.6591398634351,15.0002165001271,13.6802023016049 | |phase1_expression=11.0502704502308,32.8036883180999,45.9549231783431,34.1784558776718,29.0519523368881,8.39396359559449,10.7461814673942,0.258246646883153,2.111830832275,1.63845168425395,1.19852577757853,0.8774937489487,1.02720437958723,0.34968160967599,0.999329285446988,1.61980213911861,0,1.89277299214943,1.09691546884591,1.69755860719212,20.9206493771632,4.26951090163807,3.6567970479451,15.9992422793407,15.8292403936347,22.9692785646008,18.9535278309993,17.8841123129288,10.2612646506442,9.07308467135751,14.4124831925948,0.635030673459631,3.07532393792285,0,2.88851619751275,3.32469290716985,3.67504841272264,1.67412652294763,0.7813353445238,1.0470474879476,0,0,1.45653105909346,9.9458486200706,7.09638518536602,7.52541683862894,7.04152209913235,17.2239873540553,13.4008571468028,18.6652703111312,11.8988458381558,12.9377307928474,3.52343472721246,1.45072428402269,2.01656279485478,10.2903774414379,6.01720223871389,7.21940929188419,5.46254444320914,7.40587370980846,5.07065122804943,3.38844532069132,5.33576877666684,1.3498495759221,1.97773272513395,3.5524005747305,7.78960287347852,9.22123932771731,0.622137673850866,1.08004750665353,1.89292465216244,15.4251531578054,17.0068776532742,1.34739879136449,1.43768206527355,1.83843757322004,29.731287869835,32.0495218593821,28.7244217189175,3.29715719325485,4.39140689291566,2.6045668527838,26.5223849051312,29.2636557216474,29.9484565642548,10.3120004915784,11.8168495063255,4.65998614563251,5.45228591998925,6.65029728939713,13.9134954576805,6.88339101585109,5.439770669662,4.85732872474035,11.0461990966104,9.40856462904405,18.3982190372595,3.40860645156115,3.63700406444016,7.42013106471715,9.43650912503759,6.41632387071589,15.2883143823987,14.2213340630666,5.19578498426914,6.33399663687746,8.08839112023653,13.4736978068491,1.8125651855302,8.75808620482466,5.37804512975021,7.30717147949139,5.30415643688935,8.28974523039424,7.99603208522793,9.67632753238501,9.14621380617183,36.4390379438177,13.2691582792481,9.05894359705491,11.0420759230197,11.6370060752453,5.59175283654366,20.7874365878198,17.5935233723302,6.89734049063197,3.11519323715393,2.39961092397363,2.41433431438823,36.8484972935864,27.9075367719362,6.03140890141749,32.8527965163402,35.0330176542553,31.168206683934,30.1768749306029,4.88828946481518,8.8328949133166,5.30717792710717,10.9429765060966,3.513251959993,4.13823787980251,3.78130472591233,4.21973489940002,6.39543092022482,5.25266253167884,3.84177070694888,6.46758426847539,2.15567992932842,0.378212160335639,1.75951124163949,3.72632745126877,1.11218899690239,4.179025998266,3.08673204611915,0.995171334092466,6.31991868581911,5.1469581422943,5.39910648851626,13.2560494422721,13.3679854189225,16.7457717158744,12.5474709860161,14.7573173810553,18.0492522078233,22.78832658554,30.5831677595566,28.7242742223237,29.456213134513,35.1318373129264,44.9931892979499,40.2049965419664,42.1536221358817,47.643278659932,24.814213930567,7.20332286654991,8.59088835757875,11.1069237998689,1.70630600428187,2.78684006232526,3.73715637834071,7.05892336181699,8.2279876222602,7.79925067061493,9.01605216934572,10.0466362381647,10.304743560811,11.937388322469,8.96834800747953,11.6846523125049,7.3486936957396,9.16049856970089,4.36236172192088,4.56994050438915,4.50830942692322,6.92414514674068,7.5641469995374,12.2036326609154,10.4972651626267,17.1227771656338,18.6828486131236,28.7515391937795,9.19003143970162,1.00107063429656,2.94838492669805,1.34917267430912,3.04290182082754,1.20588579876208,2.80088436959562,5.75392274901621,11.5116011010275,5.21666685057355,10.0637744569148,9.67566463938109,5.92871578917665,6.06189307073068,5.9201146462231,13.0259750768109,8.86815312799702,2.84237117655727,1.14075483509418,2.8856664581782,2.34690248288502,3.01511263395268,5.47500374037832,9.95181604074774,3.94087860265477,5.09368786192182,5.10255259703959,8.52089236521838,8.11619414769709,11.8612228036839,0,2.17562273527484,1.96705709207614,5.51873492609465,43.5092098866916,36.4528345301752,3.27869890753351,47.7170052416265,8.51872192423893,7.02789739733949,5.38558494331997,3.34556317133573,2.89638276307112,3.11384183867716,2.83367491172426,7.59865230569411,5.92931666919785,21.8498495166829,4.11626247103979,4.09550888434687,3.74640006513225,2.96946221350564,1.32745138339963,2.6705869977048,3.32555912661226,3.01768127609437,3.83892460745005,3.3817866273832,8.5281336745513,2.54473610634254,3.56497378384721,1.26414703174326,3.16255825724996,5.15677716240934,3.06395645178409,3.6012218806262,1.29358683782755,2.14337035031592,2.48276327099183,4.28085162244969,4.11372551505302,4.56697423671899,6.10146440965647,9.10877904714427,1.7642271844397,5.27636009412736,5.16686165426898,3.07595917133595,3.58117032009409,2.62625439592098,6.41257840585672,37.6413363081335,0.854354403989263,2.06386867963222,1.29636169158798,1.88368457004691,1.0935538217682,1.60144721244566,5.77926661979108,6.43776680688827,6.90999869022119,10.5013767981662,1.42351197111511,2.03319467126849,3.24016022465404,2.92723614420256,5.02233896616208,4.04593039154462,4.95920734352016,9.6849698534091,9.20266310371729,2.4853572523477,64.8246879486819,2.8408143748356,2.64733584731356,2.72231663681667,4.52059382172059,4.22390313726945,7.27614879603675,4.1665403150064,6.71099804324549,24.1584120826006,35.7157207759753,2.21207784439725,1.82452693761148,1.23253148597793,0.389762468933385,0.895133478337407,0.993406773906324,1.32214994471966,0.738447635872886,2.01932899896295,1.143102099825,1.10908803650525,1.16949456887703,0.769694733122636,1.63627663054197,25.8472637321341,3.99574716073316,3.6782681209885,5.37230772365051,5.21611903886914,5.81815673898664,3.29672923681077,2.78678892802786,2.00628841614145,22.0253218620656,13.3494318587081,18.3326564300607,16.3260523226503,16.4419804744954,25.6833925112498,16.2005400055633,24.3173449741079,19.4851235863208,19.6748918465692,2.49089634202024,3.19219898720825,3.41467211508268,1.94485373654635,2.93458427679175,9.37601893095072,8.88986911206461,10.0957178047058,10.9112531261217,12.6348605881899,12.1670063947315,9.61994341068989,6.83583004530142,9.795848317945,7.12199815049605,9.52587382566147,8.11190281613988,10.2241886845764,14.4230065281157,11.0399190100798,6.51451579532289,10.2935967572416,10.2527561677348,10.4649419975277,9.41093804153306,10.9998990259179,9.69518256225695,9.99664903463803,8.55565917228929,12.3451299764702,7.82991119619549,6.99381824866501,11.867700251921,9.76102099471586,8.29498427218908,5.24602213669686,9.82512755470715,13.5368764050428,20.6591398634351,15.0002165001271,13.6802023016049 | ||
|short_description=p3@Ghitm | |short_description=p3@Ghitm | ||
}} | }} |
Latest revision as of 22:45, 25 September 2015
Short description: | p3@Ghitm |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ghitm_5end |
Coexpression cluster: | MCL_coexpression_mm9:1132 |
Association with transcript: | -14bp_to_NM_001199122, uc007tbx.2_5end |
EntrezGene: | Ghitm |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.02e-09 | 92 |
cardiovascular system | 1.50e-08 | 23 |
circulatory system | 1.50e-08 | 23 |
primary circulatory organ | 6.10e-08 | 18 |
heart | 6.10e-08 | 18 |
primitive heart tube | 6.10e-08 | 18 |
primary heart field | 6.10e-08 | 18 |
anterior lateral plate mesoderm | 6.10e-08 | 18 |
heart tube | 6.10e-08 | 18 |
heart primordium | 6.10e-08 | 18 |
cardiac mesoderm | 6.10e-08 | 18 |
cardiogenic plate | 6.10e-08 | 18 |
heart rudiment | 6.10e-08 | 18 |
compound organ | 6.97e-08 | 43 |
tube | 4.64e-07 | 114 |