FFCP PHASE1:Mm9::chr5:33196834..33196897,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=215476 | |EntrezGene=215476 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=614 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q7C4,Q3UYV6,Q6UDR4 | |UniProt=E9Q7C4,Q3UYV6,Q6UDR4 | ||
|association_with_transcript=0bp_to_ENSMUST00000120129,ENSMUST00000130134,NM_194340,uc008wzy.2_5end | |association_with_transcript=0bp_to_ENSMUST00000120129,ENSMUST00000130134,NM_194340,uc008wzy.2_5end | ||
|cluster_id=chr5:33196834..33196897,- | |||
|description=CAGE_peak_1_at_C330019G07Rik_5end | |description=CAGE_peak_1_at_C330019G07Rik_5end | ||
|id=chr5:33196834..33196897,- | |id=chr5:33196834..33196897,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005911!7.83e-11!69;UBERON:0005057!3.02e-10!51;UBERON:0004177!1.22e-09!29;UBERON:0003929!2.11e-08!55;UBERON:0000077!9.89e-08!97;UBERON:0001041!1.21e-07!92;UBERON:0004921!2.12e-07!126;UBERON:0004185!2.12e-07!126;UBERON:0003408!2.96e-07!24;UBERON:0003104!4.89e-07!131;UBERON:0009142!4.89e-07!131;UBERON:0002370!5.51e-07!23;UBERON:0000974!5.51e-07!23;UBERON:0004807!5.51e-07!23;UBERON:0005058!5.51e-07!23;UBERON:0003351!5.51e-07!23;UBERON:0009113!5.51e-07!23;UBERON:0003295!5.51e-07!23;UBERON:0009722!5.51e-07!23;UBERON:0005562!5.51e-07!23;UBERON:0007690!5.51e-07!23;UBERON:0004119!5.77e-07!130;UBERON:0000925!5.77e-07!130;UBERON:0006595!5.77e-07!130;UBERON:0001007!5.86e-07!128;UBERON:0001555!5.86e-07!128;UBERON:0007026!5.86e-07!128;UBERON:0002405!8.20e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005911,7.83e-11,69;UBERON:0004177,1.22e-09,29;UBERON:0005057,1.22e-09,29;UBERON:0001041,2.19e-09,80;UBERON:0000077,7.11e-09,35;UBERON:0004921,1.13e-08,114;UBERON:0003929,2.11e-08,55;UBERON:0001007,3.69e-08,116;UBERON:0001555,3.69e-08,116;UBERON:0007026,3.69e-08,116;UBERON:0004119,3.77e-08,118;UBERON:0000925,3.77e-08,118;UBERON:0006595,3.77e-08,118;UBERON:0003408,2.96e-07,24;UBERON:0002370,5.51e-07,23;UBERON:0000974,5.51e-07,23;UBERON:0004807,5.51e-07,23;UBERON:0005058,5.51e-07,23;UBERON:0003351,5.51e-07,23;UBERON:0009113,5.51e-07,23;UBERON:0003295,5.51e-07,23;UBERON:0009722,5.51e-07,23;UBERON:0005562,5.51e-07,23;UBERON:0007690,5.51e-07,23 | |||
|phase1_expression=11.69086583865,13.2610654902957,17.7449703361919,19.660173734944,26.0465779572101,16.6200479192771,14.9512089981136,21.1762250444185,23.65250532148,22.9383235795554,14.5535272991679,17.9487357739507,23.6257007305064,19.7570109466934,27.3150004688843,20.8549525411521,25.8837894907414,29.9689057090326,33.7301506670117,23.3414308488917,14.1171861650776,15.8865521921416,11.2315909329742,11.9994317095055,10.3234176480227,16.0784949952206,11.1998119001359,11.4199753323521,6.65081968097309,9.8291750606373,7.09537634096975,14.6057054895715,13.5314253268605,15.8481681015439,13.8648777480612,10.472782657585,13.271008157054,28.4601508901097,21.8773896466664,24.6056159667685,29.9998058895817,24.589637458504,27.1885797697446,11.7084040717287,9.42805460341485,14.1330999164495,1.56478268869608,2.18025156380447,1.75748946187577,3.30530828426282,1.53985063787899,2.87505128729943,27.1807821813533,15.9579671242496,22.1821907434026,7.20326420900652,6.01720223871389,8.25075347643908,4.65327859977075,2.64495489636016,3.80298842103708,2.71075625655306,3.55717918444456,1.3498495759221,1.97773272513395,4.9733608046227,5.09320187881288,3.45796474789399,9.64313394468842,6.21027316325777,4.83747411108179,6.56997264128748,6.62605622854841,7.59442955132715,7.18841032636773,6.43453150627015,13.2139057199266,13.4071704989447,12.2885226604995,5.80299666012853,6.49562269577109,5.73004707612436,6.97957497503452,10.1297269805702,11.7654650788144,11.1958862479994,9.39653093274079,6.71038004971082,5.60373830665562,7.3304413303582,14.2033599463822,6.88339101585109,4.0798280022465,9.17495425784289,9.74664626171504,15.2329141613094,9.97155382935438,7.15807354827843,2.85764605063156,5.3000936176551,9.71819596459095,12.8326477414318,17.8363667794652,14.2213340630666,6.49473123033642,6.08063677140237,3.53867111510348,11.6467557313441,38.5817446634286,16.7739617143252,12.3174582003956,12.1786191324856,14.0675453326196,13.8664829308413,16.6975964132701,12.9436589069566,19.2812074832812,11.5679485535929,15.0383793831479,11.6472131962135,17.2256384399107,20.8496358848145,13.0474232852686,13.7606974595427,17.5935233723302,17.8819938646014,11.2626217035565,7.7987355029143,9.27612657633372,12.7322043494099,20.1300265240196,12.1884721549478,16.339486098074,16.3657892691412,10.8049783170971,15.5751612545047,12.4244023897386,19.2830804445644,10.867078612648,11.3638602178696,12.3614420814569,10.5754968039398,10.2635413989049,15.6733010549144,16.3287597963187,14.9893052733274,16.6789069716317,12.9351685369508,9.05385570317937,13.8047438522508,15.6596500505914,10.5213951565236,17.5169767012127,16.3678518265418,14.1989674121481,13.5343301436575,7.72434506044558,7.20574139921202,9.09323198065896,14.7059298500206,10.7881987591304,13.6847166710371,11.6004920436753,13.9702604540657,11.5700334665534,14.4171045745253,13.413670069981,10.3921154706781,12.5065485934245,8.53670813211295,10.6200140505071,9.0643992203706,11.6361561104257,7.38135303182045,16.8231958851302,10.7020796874456,18.5034518470927,14.0158800331678,11.7308537794379,12.0763069367428,14.8197580520407,17.7481501668541,14.0098167622268,13.1255682017666,17.5575752771469,12.3524216043008,17.3421294072186,13.9269530428806,13.6474860983384,17.0775687644302,13.6166971421057,16.7278669533668,5.69003702859245,15.4235492023134,16.9061603509621,15.6811522440892,17.4557238450863,17.60409079247,17.0738650235495,18.1560482014911,13.0308944108341,11.8461277364928,18.0836102523161,19.6877224744991,20.4421354917731,21.8116249013308,22.1117532313468,18.0882869814313,20.624693994295,18.7002489343027,18.483415852354,14.0026320725922,18.6898668485561,18.6070473834252,20.2824487524464,15.6598904327209,14.351793081753,14.473305640901,12.3784637411625,10.2325362356062,19.5557971730431,20.3694102930226,18.3058393665032,17.253144516507,18.3293603482231,20.0987657293533,22.0689201748667,18.3815692408483,20.2507556195009,15.5670148979951,15.8870183316624,16.2006945611293,9.04747703635634,7.61467957346193,15.2446924635901,14.3487108078461,13.8073507389501,16.4096361229084,8.52461715958712,9.3414243065618,11.6738041184015,12.1036010731958,10.5557464889071,14.5770966751057,15.5959071857676,17.5507449089076,15.7876173653209,14.9050487534769,15.8115111178609,14.7807805554031,17.1747503102005,10.8620018237026,16.6144698540648,17.4868330350888,6.63725691699814,12.3818124439041,11.4882951646605,12.0707251043775,10.0402643579463,17.8312385807478,14.9888410037568,20.3578888507403,16.3988794056972,12.3254335594968,10.5418608574999,11.3449097573006,15.3197822589205,13.324520958317,5.43306471887569,12.8602221018955,16.4926417287314,15.8748247665843,12.6702745863633,7.61162372786498,16.192347856396,12.921756322693,30.4329189315847,15.9939665353236,21.3133043238595,18.3954421030875,17.4283622244579,21.6665987663481,13.699599321603,14.4631735568198,22.8966980269123,16.0981757011314,20.7417870654077,27.8785316366943,30.3461185540676,25.8519335723371,18.0177135793487,18.3336402543992,20.868196044468,5.72802370809068,14.3932877079417,17.485474172909,14.688726351765,16.0997987931141,15.5037420259786,13.8910276776365,15.2082358534618,12.5642852152334,13.3503422490547,18.0188400795208,21.4203316699992,18.9886013475853,10.4238848987971,13.8060343724274,12.011863583429,12.5027532863176,14.317583114782,20.962905959876,23.2787744625078,15.2197996120384,19.0099804130191,31.917123183446,7.9062833963164,12.0171819882848,16.6298653411578,17.9026695667481,18.4773659946576,23.6785035554339,20.3811547500917,24.0300150876591,28.6537593022799,24.6015891733891,30.9916060752413,27.2279511842132,31.9073942955683,6.80191150845634,8.65745218158852,11.6628013592318,9.90519236548063,12.5573236120924,14.8269155606434,16.3004945597866,13.076471123823,16.0503073291316,11.8597886949584,17.4923589872727,19.4784474569395,9.45192502890282,13.7016503954128,16.6186657425734,12.1504050041725,12.6089936902782,17.2194115413998,15.5328093525546,9.96358536808096,11.1726964552289,12.4635532200518,17.9898970630538,13.6248555708189,12.501358574601,15.3350242183115,15.658664350156,18.2923949467335,15.1618327058278,16.9831130926461,13.0152175556393,14.5144336578318,16.0703132536222,15.5075766180156,14.7651044297753,18.7732608030666,14.8540099757053,16.071350131329,16.0446822946493,16.4577241144999,13.3106854619503,15.2599161566285,13.5172167468066,16.2809228118522,15.4844732441768,14.8171658026946,17.6256706663355,13.716215498432,9.53941861818155,14.5921072292734,14.2831499444567,6.54769669071503,14.4091262302948,14.2750892126045,12.4905288968973,10.292990771598,16.1153290536224,11.0947232599929,11.9119366324538,11.8252596166415 | |phase1_expression=11.69086583865,13.2610654902957,17.7449703361919,19.660173734944,26.0465779572101,16.6200479192771,14.9512089981136,21.1762250444185,23.65250532148,22.9383235795554,14.5535272991679,17.9487357739507,23.6257007305064,19.7570109466934,27.3150004688843,20.8549525411521,25.8837894907414,29.9689057090326,33.7301506670117,23.3414308488917,14.1171861650776,15.8865521921416,11.2315909329742,11.9994317095055,10.3234176480227,16.0784949952206,11.1998119001359,11.4199753323521,6.65081968097309,9.8291750606373,7.09537634096975,14.6057054895715,13.5314253268605,15.8481681015439,13.8648777480612,10.472782657585,13.271008157054,28.4601508901097,21.8773896466664,24.6056159667685,29.9998058895817,24.589637458504,27.1885797697446,11.7084040717287,9.42805460341485,14.1330999164495,1.56478268869608,2.18025156380447,1.75748946187577,3.30530828426282,1.53985063787899,2.87505128729943,27.1807821813533,15.9579671242496,22.1821907434026,7.20326420900652,6.01720223871389,8.25075347643908,4.65327859977075,2.64495489636016,3.80298842103708,2.71075625655306,3.55717918444456,1.3498495759221,1.97773272513395,4.9733608046227,5.09320187881288,3.45796474789399,9.64313394468842,6.21027316325777,4.83747411108179,6.56997264128748,6.62605622854841,7.59442955132715,7.18841032636773,6.43453150627015,13.2139057199266,13.4071704989447,12.2885226604995,5.80299666012853,6.49562269577109,5.73004707612436,6.97957497503452,10.1297269805702,11.7654650788144,11.1958862479994,9.39653093274079,6.71038004971082,5.60373830665562,7.3304413303582,14.2033599463822,6.88339101585109,4.0798280022465,9.17495425784289,9.74664626171504,15.2329141613094,9.97155382935438,7.15807354827843,2.85764605063156,5.3000936176551,9.71819596459095,12.8326477414318,17.8363667794652,14.2213340630666,6.49473123033642,6.08063677140237,3.53867111510348,11.6467557313441,38.5817446634286,16.7739617143252,12.3174582003956,12.1786191324856,14.0675453326196,13.8664829308413,16.6975964132701,12.9436589069566,19.2812074832812,11.5679485535929,15.0383793831479,11.6472131962135,17.2256384399107,20.8496358848145,13.0474232852686,13.7606974595427,17.5935233723302,17.8819938646014,11.2626217035565,7.7987355029143,9.27612657633372,12.7322043494099,20.1300265240196,12.1884721549478,16.339486098074,16.3657892691412,10.8049783170971,15.5751612545047,12.4244023897386,19.2830804445644,10.867078612648,11.3638602178696,12.3614420814569,10.5754968039398,10.2635413989049,15.6733010549144,16.3287597963187,14.9893052733274,16.6789069716317,12.9351685369508,9.05385570317937,13.8047438522508,15.6596500505914,10.5213951565236,17.5169767012127,16.3678518265418,14.1989674121481,13.5343301436575,7.72434506044558,7.20574139921202,9.09323198065896,14.7059298500206,10.7881987591304,13.6847166710371,11.6004920436753,13.9702604540657,11.5700334665534,14.4171045745253,13.413670069981,10.3921154706781,12.5065485934245,8.53670813211295,10.6200140505071,9.0643992203706,11.6361561104257,7.38135303182045,16.8231958851302,10.7020796874456,18.5034518470927,14.0158800331678,11.7308537794379,12.0763069367428,14.8197580520407,17.7481501668541,14.0098167622268,13.1255682017666,17.5575752771469,12.3524216043008,17.3421294072186,13.9269530428806,13.6474860983384,17.0775687644302,13.6166971421057,16.7278669533668,5.69003702859245,15.4235492023134,16.9061603509621,15.6811522440892,17.4557238450863,17.60409079247,17.0738650235495,18.1560482014911,13.0308944108341,11.8461277364928,18.0836102523161,19.6877224744991,20.4421354917731,21.8116249013308,22.1117532313468,18.0882869814313,20.624693994295,18.7002489343027,18.483415852354,14.0026320725922,18.6898668485561,18.6070473834252,20.2824487524464,15.6598904327209,14.351793081753,14.473305640901,12.3784637411625,10.2325362356062,19.5557971730431,20.3694102930226,18.3058393665032,17.253144516507,18.3293603482231,20.0987657293533,22.0689201748667,18.3815692408483,20.2507556195009,15.5670148979951,15.8870183316624,16.2006945611293,9.04747703635634,7.61467957346193,15.2446924635901,14.3487108078461,13.8073507389501,16.4096361229084,8.52461715958712,9.3414243065618,11.6738041184015,12.1036010731958,10.5557464889071,14.5770966751057,15.5959071857676,17.5507449089076,15.7876173653209,14.9050487534769,15.8115111178609,14.7807805554031,17.1747503102005,10.8620018237026,16.6144698540648,17.4868330350888,6.63725691699814,12.3818124439041,11.4882951646605,12.0707251043775,10.0402643579463,17.8312385807478,14.9888410037568,20.3578888507403,16.3988794056972,12.3254335594968,10.5418608574999,11.3449097573006,15.3197822589205,13.324520958317,5.43306471887569,12.8602221018955,16.4926417287314,15.8748247665843,12.6702745863633,7.61162372786498,16.192347856396,12.921756322693,30.4329189315847,15.9939665353236,21.3133043238595,18.3954421030875,17.4283622244579,21.6665987663481,13.699599321603,14.4631735568198,22.8966980269123,16.0981757011314,20.7417870654077,27.8785316366943,30.3461185540676,25.8519335723371,18.0177135793487,18.3336402543992,20.868196044468,5.72802370809068,14.3932877079417,17.485474172909,14.688726351765,16.0997987931141,15.5037420259786,13.8910276776365,15.2082358534618,12.5642852152334,13.3503422490547,18.0188400795208,21.4203316699992,18.9886013475853,10.4238848987971,13.8060343724274,12.011863583429,12.5027532863176,14.317583114782,20.962905959876,23.2787744625078,15.2197996120384,19.0099804130191,31.917123183446,7.9062833963164,12.0171819882848,16.6298653411578,17.9026695667481,18.4773659946576,23.6785035554339,20.3811547500917,24.0300150876591,28.6537593022799,24.6015891733891,30.9916060752413,27.2279511842132,31.9073942955683,6.80191150845634,8.65745218158852,11.6628013592318,9.90519236548063,12.5573236120924,14.8269155606434,16.3004945597866,13.076471123823,16.0503073291316,11.8597886949584,17.4923589872727,19.4784474569395,9.45192502890282,13.7016503954128,16.6186657425734,12.1504050041725,12.6089936902782,17.2194115413998,15.5328093525546,9.96358536808096,11.1726964552289,12.4635532200518,17.9898970630538,13.6248555708189,12.501358574601,15.3350242183115,15.658664350156,18.2923949467335,15.1618327058278,16.9831130926461,13.0152175556393,14.5144336578318,16.0703132536222,15.5075766180156,14.7651044297753,18.7732608030666,14.8540099757053,16.071350131329,16.0446822946493,16.4577241144999,13.3106854619503,15.2599161566285,13.5172167468066,16.2809228118522,15.4844732441768,14.8171658026946,17.6256706663355,13.716215498432,9.53941861818155,14.5921072292734,14.2831499444567,6.54769669071503,14.4091262302948,14.2750892126045,12.4905288968973,10.292990771598,16.1153290536224,11.0947232599929,11.9119366324538,11.8252596166415 | ||
|short_description=p1@C330019G07Rik | |short_description=p1@C330019G07Rik | ||
}} | }} |
Latest revision as of 22:57, 25 September 2015
Short description: | p1@C330019G07Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_C330019G07Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:614 |
Association with transcript: | 0bp_to_ENSMUST00000120129, ENSMUST00000130134, NM_194340, uc008wzy.2_5end |
EntrezGene: | C330019G07Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelium | 7.83e-11 | 69 |
hemopoietic organ | 1.22e-09 | 29 |
immune organ | 1.22e-09 | 29 |
foregut | 2.19e-09 | 80 |
mixed endoderm/mesoderm-derived structure | 7.11e-09 | 35 |
subdivision of digestive tract | 1.13e-08 | 114 |
gut epithelium | 2.11e-08 | 55 |
digestive system | 3.69e-08 | 116 |
digestive tract | 3.69e-08 | 116 |
primitive gut | 3.69e-08 | 116 |
endoderm-derived structure | 3.77e-08 | 118 |
endoderm | 3.77e-08 | 118 |
presumptive endoderm | 3.77e-08 | 118 |
gland of gut | 2.96e-07 | 24 |
thymus | 5.51e-07 | 23 |
neck | 5.51e-07 | 23 |
respiratory system epithelium | 5.51e-07 | 23 |
hemolymphoid system gland | 5.51e-07 | 23 |
pharyngeal epithelium | 5.51e-07 | 23 |
thymic region | 5.51e-07 | 23 |
pharyngeal gland | 5.51e-07 | 23 |
entire pharyngeal arch endoderm | 5.51e-07 | 23 |
thymus primordium | 5.51e-07 | 23 |
early pharyngeal endoderm | 5.51e-07 | 23 |