FFCP PHASE1:Mm9::chr10:39646734..39646750,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72045 | |EntrezGene=72045 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=G5E8A5,Q8VCV9 | |UniProt=G5E8A5,Q8VCV9 | ||
|association_with_transcript=-5bp_to_ENSMUST00000045526,NM_001163503,uc007ewh.1_5end | |association_with_transcript=-5bp_to_ENSMUST00000045526,NM_001163503,uc007ewh.1_5end | ||
|cluster_id=chr10:39646734..39646750,- | |||
|description=CAGE_peak_1_at_2010001E11Rik_5end | |description=CAGE_peak_1_at_2010001E11Rik_5end | ||
|id=chr10:39646734..39646750,- | |id=chr10:39646734..39646750,- | ||
|ontology_enrichment_celltype=CL:0002563!4.48e-13!9;CL:0002251!4.48e-13!9;CL:0000239!9.12e-10!6;CL:0000677!9.12e-10!6;CL:0000212!9.12e-10!6;CL:0000584!9.12e-10!6;CL:0000075!3.39e-08!7;CL:0002076!6.33e-07!15 | |ontology_enrichment_celltype=CL:0002563!4.48e-13!9;CL:0002251!4.48e-13!9;CL:0000239!9.12e-10!6;CL:0000677!9.12e-10!6;CL:0000212!9.12e-10!6;CL:0000584!9.12e-10!6;CL:0000075!3.39e-08!7;CL:0002076!6.33e-07!15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.67e-22,9;CL:0002251,2.67e-22,9;CL:0000239,2.47e-16,6;CL:0000677,2.47e-16,6;CL:0000584,2.47e-16,6;CL:0000075,6.74e-14,7;CL:0000066,8.48e-13,25;CL:0002076,1.01e-12,15;CL:0000223,3.93e-09,20;CL:0000682,1.26e-08,3;CL:0002250,1.41e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.14e-25!43;UBERON:0000344!2.28e-21!15;UBERON:0001242!1.04e-18!13;UBERON:0000060!1.04e-18!13;UBERON:0001262!1.04e-18!13;UBERON:0004786!1.04e-18!13;UBERON:0005409!2.56e-18!59;UBERON:0004923!3.04e-13!24;UBERON:0003350!4.48e-13!9;UBERON:0004808!4.48e-13!9;UBERON:0001277!4.48e-13!9;UBERON:0000485!2.89e-10!11;UBERON:0004119!3.64e-10!130;UBERON:0000925!3.64e-10!130;UBERON:0006595!3.64e-10!130;UBERON:0001007!9.49e-10!128;UBERON:0001555!9.49e-10!128;UBERON:0007026!9.49e-10!128;UBERON:0004921!1.72e-08!126;UBERON:0004185!1.72e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.54e-57,31;UBERON:0005409,2.32e-38,47;UBERON:0000344,2.64e-37,15;UBERON:0001242,1.72e-32,13;UBERON:0001262,1.72e-32,13;UBERON:0004786,1.72e-32,13;UBERON:0003350,2.67e-22,9;UBERON:0004808,2.67e-22,9;UBERON:0001277,2.67e-22,9;UBERON:0004923,5.06e-22,24;UBERON:0000485,6.03e-18,11;UBERON:0001007,1.88e-14,116;UBERON:0001555,1.88e-14,116;UBERON:0007026,1.88e-14,116;UBERON:0004119,4.22e-14,118;UBERON:0000925,4.22e-14,118;UBERON:0006595,4.22e-14,118;UBERON:0004921,2.69e-12,114;UBERON:0002108,3.21e-11,4;UBERON:0000331,6.12e-09,3;UBERON:0002116,6.12e-09,3;UBERON:0001204,6.12e-09,3;UBERON:0001168,6.12e-09,3 | |||
|phase1_expression=0,36.9913932097723,34.5799421936047,126.430040326255,115.706913617606,9.06548068324205,10.2789561862031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261199789138935,26.8787270292923,23.3997466688513,29.285830169866,28.861053742658,17.2376986148711,46.745761186268,68.0481350351813,7.09537634096975,0,0,0,1.73310971850765,3.82339684324532,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37066608316204,0,0,0,0,0,0,0,0,0,0,7.19358442230078,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,58.4996656427674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,87.8913962736903,49.4522559660828,0,0.232236671860439,0.257734922644187,1.61346819698674,2.2237804384487,2.85338439168839,42.707615539006,4.6115707322723,3.51869292320377,1.59165177632921,1.9496408711912,57.5244421538702,39.3371250771944,49.5861770403374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0,0,0,0.161464426695906,0.120625849856312,0.238744688006273,0,23.0269860937582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,2.33306951925227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.302478555410522,0.0974578807397524,0.288635524920988,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0.476293691283074,0,0,0,0,0.342869252385415,0,0,0,0,0.169229215783353,0.182927972872773,0,0,0,0,0.0985044823755635,0.409231043169689,0,0,0,0.233931608445408,0,0,0.441182838239031,0 | |phase1_expression=0,36.9913932097723,34.5799421936047,126.430040326255,115.706913617606,9.06548068324205,10.2789561862031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261199789138935,26.8787270292923,23.3997466688513,29.285830169866,28.861053742658,17.2376986148711,46.745761186268,68.0481350351813,7.09537634096975,0,0,0,1.73310971850765,3.82339684324532,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37066608316204,0,0,0,0,0,0,0,0,0,0,7.19358442230078,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,58.4996656427674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,87.8913962736903,49.4522559660828,0,0.232236671860439,0.257734922644187,1.61346819698674,2.2237804384487,2.85338439168839,42.707615539006,4.6115707322723,3.51869292320377,1.59165177632921,1.9496408711912,57.5244421538702,39.3371250771944,49.5861770403374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0,0,0,0.161464426695906,0.120625849856312,0.238744688006273,0,23.0269860937582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,2.33306951925227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.302478555410522,0.0974578807397524,0.288635524920988,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0.476293691283074,0,0,0,0,0.342869252385415,0,0,0,0,0.169229215783353,0.182927972872773,0,0,0,0,0.0985044823755635,0.409231043169689,0,0,0,0.233931608445408,0,0,0.441182838239031,0 | ||
|short_description=p1@2010001E11Rik | |short_description=p1@2010001E11Rik | ||
}} | }} |
Latest revision as of 23:52, 25 September 2015
Short description: | p1@2010001E11Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_2010001E11Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -5bp_to_ENSMUST00000045526, NM_001163503, uc007ewh.1_5end |
EntrezGene: | 2010001E11Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.67e-22 | 9 |
epithelial cell of alimentary canal | 2.67e-22 | 9 |
brush border epithelial cell | 2.47e-16 | 6 |
gut absorptive cell | 2.47e-16 | 6 |
enterocyte | 2.47e-16 | 6 |
columnar/cuboidal epithelial cell | 6.74e-14 | 7 |
epithelial cell | 8.48e-13 | 25 |
endo-epithelial cell | 1.01e-12 | 15 |
endodermal cell | 3.93e-09 | 20 |
M cell of gut | 1.26e-08 | 3 |
intestinal crypt stem cell | 1.41e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.54e-57 | 31 |
gastrointestinal system | 2.32e-38 | 47 |
mucosa | 2.64e-37 | 15 |
intestinal mucosa | 1.72e-32 | 13 |
wall of intestine | 1.72e-32 | 13 |
gastrointestinal system mucosa | 1.72e-32 | 13 |
epithelium of mucosa | 2.67e-22 | 9 |
gastrointestinal system epithelium | 2.67e-22 | 9 |
intestinal epithelium | 2.67e-22 | 9 |
organ component layer | 5.06e-22 | 24 |
simple columnar epithelium | 6.03e-18 | 11 |
digestive system | 1.88e-14 | 116 |
digestive tract | 1.88e-14 | 116 |
primitive gut | 1.88e-14 | 116 |
endoderm-derived structure | 4.22e-14 | 118 |
endoderm | 4.22e-14 | 118 |
presumptive endoderm | 4.22e-14 | 118 |
subdivision of digestive tract | 2.69e-12 | 114 |
small intestine | 3.21e-11 | 4 |
ileal mucosa | 6.12e-09 | 3 |
ileum | 6.12e-09 | 3 |
mucosa of small intestine | 6.12e-09 | 3 |
wall of small intestine | 6.12e-09 | 3 |