FFCP PHASE1:Mm9::chr2:156912734..156912777,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=383766 | |EntrezGene=383766 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=E9PZS3,A2ACG1 | |UniProt=E9PZS3,A2ACG1 | ||
|association_with_transcript=-13bp_to_ENSMUST00000166140,NM_001177439,uc012chx.1_5end | |association_with_transcript=-13bp_to_ENSMUST00000166140,NM_001177439,uc012chx.1_5end | ||
|cluster_id=chr2:156912734..156912777,+ | |||
|description=CAGE_peak_1_at_Gm1332_5end | |description=CAGE_peak_1_at_Gm1332_5end | ||
|id=chr2:156912734..156912777,+ | |id=chr2:156912734..156912777,+ | ||
|ontology_enrichment_celltype=CL:0002563!4.44e-18!9;CL:0002251!4.44e-18!9;CL:0000075!1.47e-14!7;CL:0000239!2.86e-13!6;CL:0000677!2.86e-13!6;CL:0000212!2.86e-13!6;CL:0000584!2.86e-13!6;CL:0000066!1.45e-11!25;CL:0002076!4.43e-10!15;CL:0000473!2.54e-07!3;CL:0000627!2.54e-07!3;CL:0000682!2.54e-07!3;CL:0000223!4.22e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.29e-20,6;CL:0000677,2.29e-20,6;CL:0000584,2.29e-20,6;CL:0002563,1.13e-17,9;CL:0002251,1.13e-17,9;CL:0000075,2.23e-17,7;CL:0000066,7.45e-12,25;CL:0000682,8.08e-11,3;CL:0002076,3.01e-10,15;CL:0000223,1.85e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.55e-30!15;UBERON:0000160!1.52e-29!43;UBERON:0001242!2.86e-26!13;UBERON:0000060!2.86e-26!13;UBERON:0001262!2.86e-26!13;UBERON:0004786!2.86e-26!13;UBERON:0005409!2.09e-21!59;UBERON:0003350!4.44e-18!9;UBERON:0004808!4.44e-18!9;UBERON:0001277!4.44e-18!9;UBERON:0004923!1.93e-17!24;UBERON:0000485!1.98e-17!11;UBERON:0001007!1.03e-07!128;UBERON:0001555!1.03e-07!128;UBERON:0007026!1.03e-07!128;UBERON:0000331!1.29e-07!3;UBERON:0002116!1.29e-07!3;UBERON:0001204!1.29e-07!3;UBERON:0001168!1.29e-07!3;UBERON:0004119!1.75e-07!130;UBERON:0000925!1.75e-07!130;UBERON:0006595!1.75e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.47e-36,15;UBERON:0000160,6.59e-36,31;UBERON:0001242,3.17e-30,13;UBERON:0001262,3.17e-30,13;UBERON:0004786,3.17e-30,13;UBERON:0005409,5.54e-25,47;UBERON:0004923,6.76e-22,24;UBERON:0003350,1.13e-17,9;UBERON:0004808,1.13e-17,9;UBERON:0001277,1.13e-17,9;UBERON:0000485,2.67e-14,11;UBERON:0002108,4.26e-14,4;UBERON:0000331,2.73e-11,3;UBERON:0002116,2.73e-11,3;UBERON:0001204,2.73e-11,3;UBERON:0001168,2.73e-11,3;UBERON:0001007,4.94e-10,116;UBERON:0001555,4.94e-10,116;UBERON:0007026,4.94e-10,116;UBERON:0004119,8.65e-10,118;UBERON:0000925,8.65e-10,118;UBERON:0006595,8.65e-10,118;UBERON:0004921,5.48e-08,114;UBERON:0001962,6.19e-08,2;UBERON:0001961,6.19e-08,2;UBERON:0001744,6.19e-08,2;UBERON:0001155,1.15e-07,2;UBERON:0000059,1.15e-07,2 | |||
|phase1_expression=0,26.1731555729521,18.1999695755814,32.6661348211376,37.0662840160297,5.87577451691614,6.54115393667472,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,18.3991286212418,16.2880589557691,18.9496548157957,14.6459078694085,14.2211013572687,36.8645433745365,25.2030129759931,11.5299865540758,0,0,0,1.1554064790051,0.997407872150954,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82577746171277,0,0,0,0.14084341977668,0,0,0,0,0,0,2.62622923353838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.45567044872489,0,0,22.9911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.7901523748335,16.1314845664762,0,0,0,0,0.22237804384487,0.190225626112559,15.1849299694244,0.164698954724011,0.251335208800269,0.596869416123452,0.38992817423824,14.3811105384675,10.59076444386,10.7536287557358,0,0,0,0,0,0,0,0.295220295959204,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,9.61886760878507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.86959358446502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0.115884325944855,0.192909220463705,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,26.1731555729521,18.1999695755814,32.6661348211376,37.0662840160297,5.87577451691614,6.54115393667472,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,18.3991286212418,16.2880589557691,18.9496548157957,14.6459078694085,14.2211013572687,36.8645433745365,25.2030129759931,11.5299865540758,0,0,0,1.1554064790051,0.997407872150954,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82577746171277,0,0,0,0.14084341977668,0,0,0,0,0,0,2.62622923353838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.45567044872489,0,0,22.9911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.7901523748335,16.1314845664762,0,0,0,0,0.22237804384487,0.190225626112559,15.1849299694244,0.164698954724011,0.251335208800269,0.596869416123452,0.38992817423824,14.3811105384675,10.59076444386,10.7536287557358,0,0,0,0,0,0,0,0.295220295959204,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,9.61886760878507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.86959358446502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0.115884325944855,0.192909220463705,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@Gm1332 | |short_description=p1@Gm1332 | ||
}} | }} |
Latest revision as of 00:22, 26 September 2015
Short description: | p1@Gm1332 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm1332_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -13bp_to_ENSMUST00000166140, NM_001177439, uc012chx.1_5end |
EntrezGene: | Gm1332 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.29e-20 | 6 |
gut absorptive cell | 2.29e-20 | 6 |
enterocyte | 2.29e-20 | 6 |
intestinal epithelial cell | 1.13e-17 | 9 |
epithelial cell of alimentary canal | 1.13e-17 | 9 |
columnar/cuboidal epithelial cell | 2.23e-17 | 7 |
epithelial cell | 7.45e-12 | 25 |
M cell of gut | 8.08e-11 | 3 |
endo-epithelial cell | 3.01e-10 | 15 |
endodermal cell | 1.85e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.47e-36 | 15 |
intestine | 6.59e-36 | 31 |
intestinal mucosa | 3.17e-30 | 13 |
wall of intestine | 3.17e-30 | 13 |
gastrointestinal system mucosa | 3.17e-30 | 13 |
gastrointestinal system | 5.54e-25 | 47 |
organ component layer | 6.76e-22 | 24 |
epithelium of mucosa | 1.13e-17 | 9 |
gastrointestinal system epithelium | 1.13e-17 | 9 |
intestinal epithelium | 1.13e-17 | 9 |
simple columnar epithelium | 2.67e-14 | 11 |
small intestine | 4.26e-14 | 4 |
ileal mucosa | 2.73e-11 | 3 |
ileum | 2.73e-11 | 3 |
mucosa of small intestine | 2.73e-11 | 3 |
wall of small intestine | 2.73e-11 | 3 |
digestive system | 4.94e-10 | 116 |
digestive tract | 4.94e-10 | 116 |
primitive gut | 4.94e-10 | 116 |
endoderm-derived structure | 8.65e-10 | 118 |
endoderm | 8.65e-10 | 118 |
presumptive endoderm | 8.65e-10 | 118 |
subdivision of digestive tract | 5.48e-08 | 114 |
gut-associated lymphoid tissue | 6.19e-08 | 2 |
mucosa-associated lymphoid tissue | 6.19e-08 | 2 |
lymphoid tissue | 6.19e-08 | 2 |
colon | 1.15e-07 | 2 |
large intestine | 1.15e-07 | 2 |