FFCP PHASE1:Mm9::chr11:95704540..95704553,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr11:95704540..95704553,+ to FFCP PHASE1:Mm9::chr11:95704540..95704553,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14710 | |EntrezGene=14710 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=38 | |||
|TSSclassifier=NA | |||
|UniProt=Q61017 | |UniProt=Q61017 | ||
|association_with_transcript=0bp_to_ENSMUST00000107709_5end | |||
|cluster_id=chr11:95704540..95704553,+ | |||
|description=CAGE_peak_12_at_Gngt2_5end | |||
|id=chr11:95704540..95704553,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002092,1.22e-20,3;CL:0002540,1.22e-20,3;CL:0002194,4.12e-15,4;CL:0000766,4.12e-15,4;CL:0000234,4.12e-15,4;CL:0000576,4.12e-15,4;CL:0000235,4.12e-15,4;CL:0000864,4.12e-15,4;CL:0002009,4.12e-15,4;CL:0000040,4.12e-15,4;CL:0000559,4.12e-15,4;CL:0002476,5.25e-14,2;CL:0000473,7.09e-09,7;CL:0000557,7.09e-09,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.86e-09,3;DOID:4045,3.86e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0002405!1.20e-13!70;UBERON:0002193!3.86e-11!48;UBERON:0002390!2.88e-10!45;UBERON:0003061!2.88e-10!45;UBERON:0001474!9.12e-10!22;UBERON:0004765!9.12e-10!22;UBERON:0001434!9.12e-10!22;UBERON:0002204!5.32e-09!32;UBERON:0002371!8.61e-09!16;UBERON:0003081!3.76e-08!88;UBERON:0000926!8.34e-08!193;UBERON:0004120!8.34e-08!193;UBERON:0006603!8.34e-08!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.80e-14,16;UBERON:0002204,3.61e-12,32;UBERON:0001474,1.95e-10,22;UBERON:0004765,1.95e-10,22;UBERON:0001434,1.95e-10,22 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0.699561878128147,0.157731082679119,0.411343300817216,0.42438965179803,0.17008658030214,0.198581902401771,0.261199789138935,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,1.5626706890476,1.0470474879476,1.17646297606203,1.36609096991689,1.45653105909346,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0.286533439938757,0,0,0,0,0,0,14.3983954765024,18.7884608887725,15.6305625288142,1.49800055259202,0.384218305321555,0.103689612308478,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0.30559649555362,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.776813650941515,0,0,0,0,0.150722640552623,0,0.125666591329675,0,0.144599356919912,0.884610551949874,0.323533699894818,0,0.484875253135222,0,0,0,0,0.359445373517761,0,0,0,0,0,0,0.255715457330331,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0.164167464079095,0,0,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0,0,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0.296452627087149,0,0.196558995113203,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0,0.648540907100142,0,1.43768206527355,0,0.312037673114561,0.252578877947112,0.896987067609561,0.482443521363367,0.369506380333209,0,0,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0,0,0.491589944147214,0.690739927463582,1.15719246865209,4.52373851817817,2.71952841909355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238744688006273,0,0,0,2.05045056957423,0.206386867963223,0.555583582109135,0.188368457004691,0.820165366326151,0.228778173206523,0.169978429993855,0,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0,0.316011120628178,0,0.102710957164827,0,0.179026695667481,0.198681354781265,0.240390899039938,0,0.201932899896295,0.0762068066549998,0.504130925684203,0.194915761479505,0.0962118416403295,0.350630706544707,0,0,0,0,0,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0,0.182927972872773,0,0,0,0,0.197008964751127,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0.463735671240843 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0.699561878128147,0.157731082679119,0.411343300817216,0.42438965179803,0.17008658030214,0.198581902401771,0.261199789138935,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,1.5626706890476,1.0470474879476,1.17646297606203,1.36609096991689,1.45653105909346,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0.286533439938757,0,0,0,0,0,0,14.3983954765024,18.7884608887725,15.6305625288142,1.49800055259202,0.384218305321555,0.103689612308478,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0.30559649555362,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.776813650941515,0,0,0,0,0.150722640552623,0,0.125666591329675,0,0.144599356919912,0.884610551949874,0.323533699894818,0,0.484875253135222,0,0,0,0,0.359445373517761,0,0,0,0,0,0,0.255715457330331,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0.164167464079095,0,0,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0,0,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0.296452627087149,0,0.196558995113203,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0,0.648540907100142,0,1.43768206527355,0,0.312037673114561,0.252578877947112,0.896987067609561,0.482443521363367,0.369506380333209,0,0,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0,0,0.491589944147214,0.690739927463582,1.15719246865209,4.52373851817817,2.71952841909355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238744688006273,0,0,0,2.05045056957423,0.206386867963223,0.555583582109135,0.188368457004691,0.820165366326151,0.228778173206523,0.169978429993855,0,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0,0.316011120628178,0,0.102710957164827,0,0.179026695667481,0.198681354781265,0.240390899039938,0,0.201932899896295,0.0762068066549998,0.504130925684203,0.194915761479505,0.0962118416403295,0.350630706544707,0,0,0,0,0,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0,0.182927972872773,0,0,0,0,0.197008964751127,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0.463735671240843 | ||
|short_description=p12@Gngt2 | |||
}} | }} |
Latest revision as of 01:01, 26 September 2015
Short description: | p12@Gngt2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Gngt2_5end |
Coexpression cluster: | MCL_coexpression_mm9:38 |
Association with transcript: | 0bp_to_ENSMUST00000107709_5end |
EntrezGene: | Gngt2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 1.22e-20 | 3 |
mesenchymal stem cell of the bone marrow | 1.22e-20 | 3 |
monopoietic cell | 4.12e-15 | 4 |
myeloid leukocyte | 4.12e-15 | 4 |
phagocyte | 4.12e-15 | 4 |
monocyte | 4.12e-15 | 4 |
macrophage | 4.12e-15 | 4 |
tissue-resident macrophage | 4.12e-15 | 4 |
macrophage dendritic cell progenitor | 4.12e-15 | 4 |
monoblast | 4.12e-15 | 4 |
promonocyte | 4.12e-15 | 4 |
bone marrow macrophage | 5.25e-14 | 2 |
defensive cell | 7.09e-09 | 7 |
granulocyte monocyte progenitor cell | 7.09e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.80e-14 | 16 |
musculoskeletal system | 3.61e-12 | 32 |
bone element | 1.95e-10 | 22 |
skeletal element | 1.95e-10 | 22 |
skeletal system | 1.95e-10 | 22 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.86e-09 | 3 |
muscle cancer | 3.86e-09 | 3 |