FFCP PHASE1:Mm9::chr3:98026071..98026087,+: Difference between revisions
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|id=chr3:98026071..98026087,+
|short_description=p1@Reg4
|description=CAGE_peak_1_at_Reg4_5end
|association_with_transcript=0bp_to_ENSMUST00000029469,NM_026328,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=67709 | |EntrezGene=67709 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=104 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D8G5 | |UniProt=Q9D8G5 | ||
|association_with_transcript=0bp_to_ENSMUST00000029469,NM_026328,uc008qpq.1_5end | |||
|cluster_id=chr3:98026071..98026087,+ | |||
|description=CAGE_peak_1_at_Reg4_5end | |||
|id=chr3:98026071..98026087,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.67e-09!9;CL:0002251!1.67e-09!9;CL:0000239!7.18e-07!6;CL:0000677!7.18e-07!6;CL:0000212!7.18e-07!6;CL:0000584!7.18e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.13e-12,9;CL:0002251,6.13e-12,9;CL:0000239,1.66e-08,6;CL:0000677,1.66e-08,6;CL:0000584,1.66e-08,6;CL:0000075,3.90e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.51e-19!43;UBERON:0000344!1.12e-15!15;UBERON:0005409!2.23e-15!59;UBERON:0001242!1.71e-13!13;UBERON:0000060!1.71e-13!13;UBERON:0001262!1.71e-13!13;UBERON:0004786!1.71e-13!13;UBERON:0003350!1.67e-09!9;UBERON:0004808!1.67e-09!9;UBERON:0001277!1.67e-09!9;UBERON:0004923!8.73e-08!24;UBERON:0000485!2.83e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.56e-35,31;UBERON:0005409,9.57e-25,47;UBERON:0000344,5.22e-20,15;UBERON:0001242,3.73e-17,13;UBERON:0001262,3.73e-17,13;UBERON:0004786,3.73e-17,13;UBERON:0003350,6.13e-12,9;UBERON:0004808,6.13e-12,9;UBERON:0001277,6.13e-12,9;UBERON:0004923,9.25e-11,24;UBERON:0000485,2.35e-09,11;UBERON:0002108,8.73e-07,4 | |||
|phase1_expression=0,6.97950815278722,10.0099832665698,15.4256747766483,14.5259761684441,269.949869234319,292.716638666194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,242.868497800391,232.391601721043,21.8208146363708,52.9837255275662,76.0613451381188,281.804731053802,112.153407743169,83.3706720063946,0,0,0,25.7077941578634,111.37721239019,30.2170647268306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.5724415755467,0,0,0,0,0,0,0,0,0,0,36.8813931492564,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,1332.70109270957,0,0,125.17395705221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,150.340546257628,57.1213223993256,0.213288250535234,0,2.83508414908605,17.1430995929841,42.0294502866805,59.9210722254561,183.168217756181,145.429177021302,154.319818203365,136.882052764312,169.618755793635,159.091035331797,239.048683161412,226.224486416961,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0,0,0,0,0.889357881261447,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,8.01127708821486,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,1.96969079694074,174.88850197791,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,1.18805874903981,0,1.09181281873089,0,0.578574190077352,0,1709.75111269204,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0.316011120628178,0,0,0.25984164595559,0,0.39736270956253,0,0.147689527174577,0.403865799792591,0,0.100826185136841,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0.209613162627982,0.735374033800057,2.00022055021454,2.26638562962784,2.88827288632634,1.51618327058278,2.02783439912192,2.26351609663291,2.80924522409647,2.43295579138503,1.78049953762401,1.90517476513229,0.927074607558844,2.12200142510076,3.29668720642645,2.50238164228475,2.74295401908332,2.30718548007139,2.14592570952589,1.74415699958794,1.69396884747595,2.96151127620868,2.0122077016005,1.57841826862706,1.90125759384206,1.68342681497322,1.54225523561426,1.77308068276014,2.04615521584845,1.70430525304563,1.92906610981141,0,5.14649538579898,5.80151845930405,4.20834330551455,0.661774257358546,0.927471342481686 | |phase1_expression=0,6.97950815278722,10.0099832665698,15.4256747766483,14.5259761684441,269.949869234319,292.716638666194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,242.868497800391,232.391601721043,21.8208146363708,52.9837255275662,76.0613451381188,281.804731053802,112.153407743169,83.3706720063946,0,0,0,25.7077941578634,111.37721239019,30.2170647268306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.5724415755467,0,0,0,0,0,0,0,0,0,0,36.8813931492564,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,1332.70109270957,0,0,125.17395705221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,150.340546257628,57.1213223993256,0.213288250535234,0,2.83508414908605,17.1430995929841,42.0294502866805,59.9210722254561,183.168217756181,145.429177021302,154.319818203365,136.882052764312,169.618755793635,159.091035331797,239.048683161412,226.224486416961,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0,0,0,0,0.889357881261447,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,8.01127708821486,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,1.96969079694074,174.88850197791,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,1.18805874903981,0,1.09181281873089,0,0.578574190077352,0,1709.75111269204,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0.316011120628178,0,0,0.25984164595559,0,0.39736270956253,0,0.147689527174577,0.403865799792591,0,0.100826185136841,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0.209613162627982,0.735374033800057,2.00022055021454,2.26638562962784,2.88827288632634,1.51618327058278,2.02783439912192,2.26351609663291,2.80924522409647,2.43295579138503,1.78049953762401,1.90517476513229,0.927074607558844,2.12200142510076,3.29668720642645,2.50238164228475,2.74295401908332,2.30718548007139,2.14592570952589,1.74415699958794,1.69396884747595,2.96151127620868,2.0122077016005,1.57841826862706,1.90125759384206,1.68342681497322,1.54225523561426,1.77308068276014,2.04615521584845,1.70430525304563,1.92906610981141,0,5.14649538579898,5.80151845930405,4.20834330551455,0.661774257358546,0.927471342481686 | ||
|short_description=p1@Reg4 | |||
}} | }} |
Latest revision as of 01:06, 26 September 2015
Short description: | p1@Reg4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Reg4_5end |
Coexpression cluster: | MCL_coexpression_mm9:104 |
Association with transcript: | 0bp_to_ENSMUST00000029469, NM_026328, uc008qpq.1_5end |
EntrezGene: | Reg4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.13e-12 | 9 |
epithelial cell of alimentary canal | 6.13e-12 | 9 |
brush border epithelial cell | 1.66e-08 | 6 |
gut absorptive cell | 1.66e-08 | 6 |
enterocyte | 1.66e-08 | 6 |
columnar/cuboidal epithelial cell | 3.90e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.56e-35 | 31 |
gastrointestinal system | 9.57e-25 | 47 |
mucosa | 5.22e-20 | 15 |
intestinal mucosa | 3.73e-17 | 13 |
wall of intestine | 3.73e-17 | 13 |
gastrointestinal system mucosa | 3.73e-17 | 13 |
epithelium of mucosa | 6.13e-12 | 9 |
gastrointestinal system epithelium | 6.13e-12 | 9 |
intestinal epithelium | 6.13e-12 | 9 |
organ component layer | 9.25e-11 | 24 |
simple columnar epithelium | 2.35e-09 | 11 |
small intestine | 8.73e-07 | 4 |