FFCP PHASE1:Mm9::chr11:96132523..96132538,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=15417 | |EntrezGene=15417 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=249 | |||
|TSSclassifier=NA | |||
|UniProt=A2A9Z6 | |UniProt=A2A9Z6 | ||
|association_with_transcript=-105bp_to_NM_008270,uc007lbn.1_5end | |||
|cluster_id=chr11:96132523..96132538,+ | |||
|description=CAGE_peak_3_at_Hoxb9_5end | |||
|id=chr11:96132523..96132538,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,1.38e-15,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!2.92e-18!21;UBERON:0002113!5.04e-13!14;UBERON:0003918!5.04e-13!14;UBERON:0005095!5.04e-13!14;UBERON:0007687!5.04e-13!14;UBERON:0001008!5.53e-13!17;UBERON:0006554!1.41e-12!16;UBERON:0003064!1.20e-08!14;UBERON:0002240!5.77e-08!6;UBERON:0005174!5.77e-08!6;UBERON:0001137!5.77e-08!6;UBERON:0001948!7.79e-07!5;UBERON:0002315!7.79e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,1.81e-48,21;UBERON:0002113,1.42e-31,14;UBERON:0003918,1.42e-31,14;UBERON:0011143,1.42e-31,14;UBERON:0005095,1.42e-31,14;UBERON:0007687,1.42e-31,14;UBERON:0006554,2.90e-24,18;UBERON:0001008,6.47e-23,19;UBERON:0003103,1.43e-22,43;UBERON:0002240,1.14e-20,6;UBERON:0005174,1.14e-20,6;UBERON:0001137,1.14e-20,6;UBERON:0001948,4.15e-16,5;UBERON:0002315,4.15e-16,5;UBERON:0002257,1.38e-15,3;UBERON:0003076,2.94e-10,12;UBERON:0003057,2.94e-10,12;UBERON:0005172,9.74e-10,49;UBERON:0005173,9.74e-10,49;UBERON:0002417,9.74e-10,49;UBERON:0000916,9.74e-10,49;UBERON:0003104,1.71e-07,61;UBERON:0009142,1.71e-07,61;UBERON:0009569,8.49e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0,0.215471232685889,0.570070258369122,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.811015449756117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.856952953211411,2.20868540951614,0,0,0,0,0,0,0,0,0,0,0,0,3.24091444021034,3.84403538157578,12.6751623161204,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,5.09610479413291,0,0,0,0,0,0.258937883647172,0.890652834388949,0.520455980298408,0.608930956624282,0,0.150722640552623,0.352766121407114,1.13099932196708,0.247194967734374,0.289198713839823,0,0.323533699894818,0.441683036920787,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.81471491080253,0.995255764880744,2.0217820674694,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0.949058123089023,0.164698954724011,0,0,0.779856348476481,0,0.432276099749388,0.199141273254367,1.51734320762465,1.14248512609729,0,1.62921062276251,1.16371492300575,1.05203729835478,1.96033265085198,1.18088118383682,1.41298855057237,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0.16488625294148,0.161464426695906,0.361877549568935,0.238744688006273,0.328281799490123,0,7.78786268444141,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.165306911450672,0,1.03691978633434,0,0,0.149516546043979,0,0.194451188344048,0,0,0.117357238645754,0.2604087696879,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,4.01257683228291,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0.853668028770671,1.21553358534147,0.419226325255965,0.183843508450014,0,0.412070114477788,0,0,0.25347929989024,0.377252682772152,0.280924522409647,0.320125762024346,0.402048282689293,0.952587382566147,0.231768651889711,0.38581844092741,0,0.147198920134397,0,0.532427418478012,0,0.436039249896986,0.376437521661322,0.169229215783353,0,0,0.407412341537585,0,0.355905054372522,0.394017929502254,0.818462086339379,0.464810523557898,0,0,0.701794825336225,0.429742108096597,0.57386499620653,0.661774257358546,0.695603506861264 | |phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0,0.215471232685889,0.570070258369122,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.811015449756117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.856952953211411,2.20868540951614,0,0,0,0,0,0,0,0,0,0,0,0,3.24091444021034,3.84403538157578,12.6751623161204,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,5.09610479413291,0,0,0,0,0,0.258937883647172,0.890652834388949,0.520455980298408,0.608930956624282,0,0.150722640552623,0.352766121407114,1.13099932196708,0.247194967734374,0.289198713839823,0,0.323533699894818,0.441683036920787,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.81471491080253,0.995255764880744,2.0217820674694,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0.949058123089023,0.164698954724011,0,0,0.779856348476481,0,0.432276099749388,0.199141273254367,1.51734320762465,1.14248512609729,0,1.62921062276251,1.16371492300575,1.05203729835478,1.96033265085198,1.18088118383682,1.41298855057237,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0.16488625294148,0.161464426695906,0.361877549568935,0.238744688006273,0.328281799490123,0,7.78786268444141,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.165306911450672,0,1.03691978633434,0,0,0.149516546043979,0,0.194451188344048,0,0,0.117357238645754,0.2604087696879,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,4.01257683228291,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0.853668028770671,1.21553358534147,0.419226325255965,0.183843508450014,0,0.412070114477788,0,0,0.25347929989024,0.377252682772152,0.280924522409647,0.320125762024346,0.402048282689293,0.952587382566147,0.231768651889711,0.38581844092741,0,0.147198920134397,0,0.532427418478012,0,0.436039249896986,0.376437521661322,0.169229215783353,0,0,0.407412341537585,0,0.355905054372522,0.394017929502254,0.818462086339379,0.464810523557898,0,0,0.701794825336225,0.429742108096597,0.57386499620653,0.661774257358546,0.695603506861264 | ||
|short_description=p3@Hoxb9 | |||
}} | }} |
Latest revision as of 01:15, 26 September 2015
Short description: | p3@Hoxb9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Hoxb9_5end |
Coexpression cluster: | MCL_coexpression_mm9:249 |
Association with transcript: | -105bp_to_NM_008270, uc007lbn.1_5end |
EntrezGene: | Hoxb9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 1.38e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 1.81e-48 | 21 |
kidney | 1.42e-31 | 14 |
kidney mesenchyme | 1.42e-31 | 14 |
upper urinary tract | 1.42e-31 | 14 |
kidney rudiment | 1.42e-31 | 14 |
kidney field | 1.42e-31 | 14 |
urinary system structure | 2.90e-24 | 18 |
renal system | 6.47e-23 | 19 |
compound organ | 1.43e-22 | 43 |
spinal cord | 1.14e-20 | 6 |
dorsal region element | 1.14e-20 | 6 |
dorsum | 1.14e-20 | 6 |
regional part of spinal cord | 4.15e-16 | 5 |
gray matter of spinal cord | 4.15e-16 | 5 |
ventral horn of spinal cord | 1.38e-15 | 3 |
posterior neural tube | 2.94e-10 | 12 |
chordal neural plate | 2.94e-10 | 12 |
abdomen element | 9.74e-10 | 49 |
abdominal segment element | 9.74e-10 | 49 |
abdominal segment of trunk | 9.74e-10 | 49 |
abdomen | 9.74e-10 | 49 |
mesenchyme | 1.71e-07 | 61 |
entire embryonic mesenchyme | 1.71e-07 | 61 |
subdivision of trunk | 8.49e-07 | 66 |