FFCP PHASE1:Mm9::chr19:58530437..58530452,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14585 | |EntrezGene=14585 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=263 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z3C9 | |UniProt=D3Z3C9 | ||
|association_with_transcript=-38bp_to_ENSMUST00000131877_5end | |association_with_transcript=-38bp_to_ENSMUST00000131877_5end | ||
|cluster_id=chr19:58530437..58530452,- | |||
|description=CAGE_peak_5_at_Gfra1_5end | |description=CAGE_peak_5_at_Gfra1_5end | ||
|id=chr19:58530437..58530452,- | |id=chr19:58530437..58530452,- | ||
|ontology_enrichment_celltype=CL:0000540!6.30e-08!33;CL:0000047!6.30e-08!33;CL:0000031!6.30e-08!33;CL:0000404!6.30e-08!33;CL:0000107!1.14e-07!9 | |ontology_enrichment_celltype=CL:0000540!6.30e-08!33;CL:0000047!6.30e-08!33;CL:0000031!6.30e-08!33;CL:0000404!6.30e-08!33;CL:0000107!1.14e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000107,4.00e-12,9;CL:0000540,1.36e-09,33;CL:0000047,1.36e-09,33;CL:0000031,1.36e-09,33;CL:0000404,1.36e-09,33;CL:0000221,1.61e-08,44;CL:0000133,1.61e-08,44;CL:0002319,4.92e-08,43;CL:0000393,3.43e-07,39;CL:0000211,3.43e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!4.01e-09!11;UBERON:0000073!2.27e-08!75;UBERON:0001016!2.27e-08!75;UBERON:0002410!1.14e-07!9;UBERON:0004121!1.44e-07!102;UBERON:0000924!1.44e-07!102;UBERON:0006601!1.44e-07!102;UBERON:0001017!1.99e-07!73;UBERON:0005743!1.99e-07!73 | |ontology_enrichment_uberon=UBERON:0000010!4.01e-09!11;UBERON:0000073!2.27e-08!75;UBERON:0001016!2.27e-08!75;UBERON:0002410!1.14e-07!9;UBERON:0004121!1.44e-07!102;UBERON:0000924!1.44e-07!102;UBERON:0006601!1.44e-07!102;UBERON:0001017!1.99e-07!73;UBERON:0005743!1.99e-07!73 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.26e-14,11;UBERON:0002410,4.00e-12,9;UBERON:0001016,3.00e-10,75;UBERON:0001017,7.91e-09,73;UBERON:0002240,1.36e-07,6;UBERON:0005174,1.36e-07,6;UBERON:0001137,1.36e-07,6;UBERON:0004121,5.48e-07,95;UBERON:0000924,5.48e-07,95;UBERON:0006601,5.48e-07,95;UBERON:0001948,7.14e-07,5;UBERON:0002315,7.14e-07,5;UBERON:0000489,8.28e-07,21 | |||
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| ||
|short_description=p5@Gfra1 | |short_description=p5@Gfra1 | ||
}} | }} |
Latest revision as of 01:31, 26 September 2015
Short description: | p5@Gfra1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Gfra1_5end |
Coexpression cluster: | MCL_coexpression_mm9:263 |
Association with transcript: | -38bp_to_ENSMUST00000131877_5end |
EntrezGene: | Gfra1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 4.00e-12 | 9 |
neuron | 1.36e-09 | 33 |
neuronal stem cell | 1.36e-09 | 33 |
neuroblast | 1.36e-09 | 33 |
electrically signaling cell | 1.36e-09 | 33 |
ectodermal cell | 1.61e-08 | 44 |
neurectodermal cell | 1.61e-08 | 44 |
neural cell | 4.92e-08 | 43 |
electrically responsive cell | 3.43e-07 | 39 |
electrically active cell | 3.43e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 1.26e-14 | 11 |
autonomic nervous system | 4.00e-12 | 9 |
nervous system | 3.00e-10 | 75 |
central nervous system | 7.91e-09 | 73 |
spinal cord | 1.36e-07 | 6 |
dorsal region element | 1.36e-07 | 6 |
dorsum | 1.36e-07 | 6 |
ectoderm-derived structure | 5.48e-07 | 95 |
ectoderm | 5.48e-07 | 95 |
presumptive ectoderm | 5.48e-07 | 95 |
regional part of spinal cord | 7.14e-07 | 5 |
gray matter of spinal cord | 7.14e-07 | 5 |
cavitated compound organ | 8.28e-07 | 21 |