FFCP PHASE1:Mm9::chr4:102243160..102243173,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr4:102243160..102243173,+ to FFCP PHASE1:Mm9::chr4:102243160..102243173,+: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=18578 | |EntrezGene=18578 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=374 | |||
|TSSclassifier=NA | |||
|UniProt=B1AWD0,E9PVP8 | |UniProt=B1AWD0,E9PVP8 | ||
|association_with_transcript=460bp_to_ENSMUST00000097950,ENSMUST00000171667_5end | |||
|cluster_id=chr4:102243160..102243173,+ | |||
|description=CAGE_peak_7_at_Pde4b_5end | |||
|id=chr4:102243160..102243173,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.64e-16,32;CL:0002032,4.64e-16,32;CL:0000037,4.64e-16,32;CL:0000837,4.64e-16,32;CL:0002320,4.51e-11,46;CL:0000134,4.51e-11,46;CL:0000791,5.87e-10,9;CL:0000789,5.87e-10,9;CL:0002420,5.87e-10,9;CL:0002419,5.87e-10,9;CL:0000790,5.87e-10,9;CL:0000838,1.55e-09,12;CL:0002031,9.87e-09,25;CL:0000219,1.04e-08,54;CL:0000542,1.11e-08,13;CL:0000051,1.11e-08,13;CL:0000049,1.22e-08,19;CL:0000624,2.68e-08,8;CL:0000084,6.33e-08,11;CL:0000827,6.33e-08,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!1.21e-08!41;UBERON:0001004!4.37e-08!42;UBERON:0005153!9.51e-08!17;UBERON:0002048!3.51e-07!14;UBERON:0000117!3.51e-07!14;UBERON:0000171!3.51e-07!14;UBERON:0000170!3.51e-07!14;UBERON:0005597!3.51e-07!14;UBERON:0000118!3.51e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.51e-11,46;UBERON:0002048,1.07e-10,14;UBERON:0000117,1.07e-10,14;UBERON:0000171,1.07e-10,14;UBERON:0000170,1.07e-10,14;UBERON:0005597,1.07e-10,14;UBERON:0000118,1.07e-10,14;UBERON:0005153,1.88e-08,17;UBERON:0005178,1.88e-08,17;UBERON:0005181,1.88e-08,17;UBERON:0002224,1.88e-08,17;UBERON:0000915,1.88e-08,17;UBERON:0008947,1.88e-08,17;UBERON:0003258,1.88e-08,17;UBERON:0005157,6.83e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,0,1.80772652818207,15.0643932702283,12.6394844213876,0.171217968225505,0.558405112967355,2.22560948910567,2.44777126773193,0.666219523631325,1.21485160433896,0,6.78243655520211,7.54129384831563,2.12194825899015,1.19060606211498,0.0992909512008853,0.522399578277871,0.319984845586813,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,1.25559489221072,1.5626706890476,2.09409497589519,6.47054636834116,6.83045484958446,2.91306211818692,0,0,0,0,0,0,0,0,0,23.3217822420254,2.17608642603403,8.4023449785616,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0.207379224616955,0,0,0,0.220868540951614,0,0.191690942036473,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0.427115042397309,0,0,0.151143120213571,4.05810284182349,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0.253359865475099,0.505524445014783,0.34255163915718,10.8753911131812,0,0.520455980298408,0.304465478312141,0.230615497256059,0.150722640552623,0.23517741427141,0,0.247194967734374,1.44599356919912,0,0.647067399789637,1.54589062922275,0.969750506270444,0,0,0,0,16.7741174308288,13.7977628128484,8.51370521389534,0,0,0,0,0,0,0,0.305518091550949,0.746441823660558,0,0,0.520481771850815,0.229902104433473,0,0.150704817835715,0,0,0,0.517406741478031,0.431135985865684,0.567318240503458,0,0.43839146485515,0,0.348252166522167,0.61734640922383,0.199034266818493,5.61770549850588,3.3455227924913,4.54661599032948,0.414251545071004,0,0.540186184383045,0.710234206755631,0.196764231747404,0.462801338662135,0.232533944750408,0.536546802799238,0.116765342367169,0.16455984991348,0.820837320395476,0.486412857275134,0.584799949701329,0.658650345873152,0.134206418760372,0,0.205809224758569,0,0,0,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0.949058123089023,0,0.502670417600539,0,0.19496408711912,0,0,0.199141273254367,0,0.342745537829186,0,0,0.193952487167626,0.0701358198903186,0.316182685621286,0.147610147979602,0.156998727841375,0,0,0.333690211432188,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0.575392274901621,0.324270453550071,0.274561413188081,2.87536413054709,0.744281895337007,0,0,0.358794827043824,0,1.66277871149944,0.189491411770485,1.30371981153621,0.678980343100753,0.469380496577004,1.34005005953453,2.14239276797412,1.36593553500459,2.52216230569906,2.21464689648775,0.956728611944923,1.96635977658886,2.07221978239075,2.4590339958857,0,0,0.983528546038072,0.827810238914197,0,0,0,1.00988370881749,0,0,0,0,0.222798674082394,0,0,0,0,0,0.283880170416537,0.35613120733451,0.162886959353576,0.329940245945071,0,0,0,0.565815239267694,0,0.307435147943927,0,0.727067458955011,0,0.316036757935816,0,0,0.680879211507576,0,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0.329098041204242,0,0,0.21183207086382,0.220528398054962,0.16488625294148,0.484393280087717,0.241251699712623,0.238744688006273,0.492422699235184,0.291480836629851,0,1.02522528478712,0.206386867963223,0.185194527369712,0.188368457004691,0.683471138605126,1.83022538565218,25.836721359066,26.0309701322004,16.5839968565309,0,0,0.203319467126849,0.324016022465404,0.209088296014469,0,0.134864346384821,0.247960367176008,0,0,0,0,0,0.165458490457098,0.194451188344048,0.387479470433193,0.168956125490778,0.352071715937262,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0.608175645870493,0.308132871494482,0.51968329191118,0.716106782669926,0.596044064343795,0.721172697119813,0.443068581523732,0.807731599585181,0.533447646584999,0.705783295957884,0.292373642219257,0.962118416403295,1.28564592399726,0,0,0,0,0.19318959403219,0.375364950902364,0,0.214368379079066,0,0,0.460325236507177,0,0,0,0,0,0.45032120322422,0.453142408984205,0.51776031175182,0.31136204275253,0,0.170733605754134,0,0.209613162627982,0.551530525350042,0.44449345560323,0.412070114477788,0.962757628775446,0.505394423527595,0.25347929989024,0.377252682772152,0.187283014939765,0.640251524048693,0.459483751644906,0,0.927074607558844,0.578727661391115,0.412085900803307,0.588795680537589,0.342869252385415,0.70990322463735,1.43061713968393,0.436039249896986,0.564656282491984,0.507687647350059,0.548783918618318,0,0.271608227691724,1.12228454331548,0.355905054372522,0.492522411877817,0,1.70430525304563,0.964533054905707,0.249810577937946,0.467863216890817,0.214871054048298,0,0,0.695603506861264 | |phase1_expression=0,0,0,0,0,0,0,1.80772652818207,15.0643932702283,12.6394844213876,0.171217968225505,0.558405112967355,2.22560948910567,2.44777126773193,0.666219523631325,1.21485160433896,0,6.78243655520211,7.54129384831563,2.12194825899015,1.19060606211498,0.0992909512008853,0.522399578277871,0.319984845586813,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,1.25559489221072,1.5626706890476,2.09409497589519,6.47054636834116,6.83045484958446,2.91306211818692,0,0,0,0,0,0,0,0,0,23.3217822420254,2.17608642603403,8.4023449785616,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0.207379224616955,0,0,0,0.220868540951614,0,0.191690942036473,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0.427115042397309,0,0,0.151143120213571,4.05810284182349,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0.253359865475099,0.505524445014783,0.34255163915718,10.8753911131812,0,0.520455980298408,0.304465478312141,0.230615497256059,0.150722640552623,0.23517741427141,0,0.247194967734374,1.44599356919912,0,0.647067399789637,1.54589062922275,0.969750506270444,0,0,0,0,16.7741174308288,13.7977628128484,8.51370521389534,0,0,0,0,0,0,0,0.305518091550949,0.746441823660558,0,0,0.520481771850815,0.229902104433473,0,0.150704817835715,0,0,0,0.517406741478031,0.431135985865684,0.567318240503458,0,0.43839146485515,0,0.348252166522167,0.61734640922383,0.199034266818493,5.61770549850588,3.3455227924913,4.54661599032948,0.414251545071004,0,0.540186184383045,0.710234206755631,0.196764231747404,0.462801338662135,0.232533944750408,0.536546802799238,0.116765342367169,0.16455984991348,0.820837320395476,0.486412857275134,0.584799949701329,0.658650345873152,0.134206418760372,0,0.205809224758569,0,0,0,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0.949058123089023,0,0.502670417600539,0,0.19496408711912,0,0,0.199141273254367,0,0.342745537829186,0,0,0.193952487167626,0.0701358198903186,0.316182685621286,0.147610147979602,0.156998727841375,0,0,0.333690211432188,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0.575392274901621,0.324270453550071,0.274561413188081,2.87536413054709,0.744281895337007,0,0,0.358794827043824,0,1.66277871149944,0.189491411770485,1.30371981153621,0.678980343100753,0.469380496577004,1.34005005953453,2.14239276797412,1.36593553500459,2.52216230569906,2.21464689648775,0.956728611944923,1.96635977658886,2.07221978239075,2.4590339958857,0,0,0.983528546038072,0.827810238914197,0,0,0,1.00988370881749,0,0,0,0,0.222798674082394,0,0,0,0,0,0.283880170416537,0.35613120733451,0.162886959353576,0.329940245945071,0,0,0,0.565815239267694,0,0.307435147943927,0,0.727067458955011,0,0.316036757935816,0,0,0.680879211507576,0,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0.329098041204242,0,0,0.21183207086382,0.220528398054962,0.16488625294148,0.484393280087717,0.241251699712623,0.238744688006273,0.492422699235184,0.291480836629851,0,1.02522528478712,0.206386867963223,0.185194527369712,0.188368457004691,0.683471138605126,1.83022538565218,25.836721359066,26.0309701322004,16.5839968565309,0,0,0.203319467126849,0.324016022465404,0.209088296014469,0,0.134864346384821,0.247960367176008,0,0,0,0,0,0.165458490457098,0.194451188344048,0.387479470433193,0.168956125490778,0.352071715937262,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0.608175645870493,0.308132871494482,0.51968329191118,0.716106782669926,0.596044064343795,0.721172697119813,0.443068581523732,0.807731599585181,0.533447646584999,0.705783295957884,0.292373642219257,0.962118416403295,1.28564592399726,0,0,0,0,0.19318959403219,0.375364950902364,0,0.214368379079066,0,0,0.460325236507177,0,0,0,0,0,0.45032120322422,0.453142408984205,0.51776031175182,0.31136204275253,0,0.170733605754134,0,0.209613162627982,0.551530525350042,0.44449345560323,0.412070114477788,0.962757628775446,0.505394423527595,0.25347929989024,0.377252682772152,0.187283014939765,0.640251524048693,0.459483751644906,0,0.927074607558844,0.578727661391115,0.412085900803307,0.588795680537589,0.342869252385415,0.70990322463735,1.43061713968393,0.436039249896986,0.564656282491984,0.507687647350059,0.548783918618318,0,0.271608227691724,1.12228454331548,0.355905054372522,0.492522411877817,0,1.70430525304563,0.964533054905707,0.249810577937946,0.467863216890817,0.214871054048298,0,0,0.695603506861264 | ||
|short_description=p7@Pde4b | |||
}} | }} |
Latest revision as of 01:47, 26 September 2015
Short description: | p7@Pde4b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Pde4b_5end |
Coexpression cluster: | MCL_coexpression_mm9:374 |
Association with transcript: | 460bp_to_ENSMUST00000097950, ENSMUST00000171667_5end |
EntrezGene: | Pde4b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.64e-16 | 32 |
hematopoietic oligopotent progenitor cell | 4.64e-16 | 32 |
hematopoietic stem cell | 4.64e-16 | 32 |
hematopoietic multipotent progenitor cell | 4.64e-16 | 32 |
connective tissue cell | 4.51e-11 | 46 |
mesenchymal cell | 4.51e-11 | 46 |
mature alpha-beta T cell | 5.87e-10 | 9 |
alpha-beta T cell | 5.87e-10 | 9 |
immature T cell | 5.87e-10 | 9 |
mature T cell | 5.87e-10 | 9 |
immature alpha-beta T cell | 5.87e-10 | 9 |
lymphoid lineage restricted progenitor cell | 1.55e-09 | 12 |
hematopoietic lineage restricted progenitor cell | 9.87e-09 | 25 |
motile cell | 1.04e-08 | 54 |
lymphocyte | 1.11e-08 | 13 |
common lymphoid progenitor | 1.11e-08 | 13 |
common myeloid progenitor | 1.22e-08 | 19 |
CD4-positive, alpha-beta T cell | 2.68e-08 | 8 |
T cell | 6.33e-08 | 11 |
pro-T cell | 6.33e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.51e-11 | 46 |
lung | 1.07e-10 | 14 |
respiratory tube | 1.07e-10 | 14 |
respiration organ | 1.07e-10 | 14 |
pair of lungs | 1.07e-10 | 14 |
lung primordium | 1.07e-10 | 14 |
lung bud | 1.07e-10 | 14 |
epithelial bud | 1.88e-08 | 17 |
thoracic cavity element | 1.88e-08 | 17 |
thoracic segment organ | 1.88e-08 | 17 |
thoracic cavity | 1.88e-08 | 17 |
thoracic segment of trunk | 1.88e-08 | 17 |
respiratory primordium | 1.88e-08 | 17 |
endoderm of foregut | 1.88e-08 | 17 |
epithelial fold | 6.83e-07 | 20 |