FFCP PHASE1:Mm9::chr19:59532741..59532757,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=329078 | |EntrezGene=329078 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1174 | |MCL_coexpression_id=1174 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=367bp_to_ENSMUST00000136990,NR_002863,uc012bod.1_5end | |association_with_transcript=367bp_to_ENSMUST00000136990,NR_002863,uc012bod.1_5end | ||
|cluster_id=chr19:59532741..59532757,- | |||
|description=CAGE_peak_3_at_Emx2os_5end | |description=CAGE_peak_3_at_Emx2os_5end | ||
|id=chr19:59532741..59532757,- | |id=chr19:59532741..59532757,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!7.08e-11!26;UBERON:0000990!7.08e-11!26;UBERON:0002113!9.58e-11!14;UBERON:0003918!9.58e-11!14;UBERON:0005095!9.58e-11!14;UBERON:0007687!9.58e-11!14;UBERON:0001008!1.79e-10!17;UBERON:0003133!7.24e-10!24;UBERON:0006554!8.98e-10!16;UBERON:0000991!2.46e-08!18;UBERON:0005564!2.46e-08!18;UBERON:0004176!1.65e-07!17;UBERON:0009196!1.65e-07!17;UBERON:0009117!1.65e-07!17 | |ontology_enrichment_uberon=UBERON:0005156!7.08e-11!26;UBERON:0000990!7.08e-11!26;UBERON:0002113!9.58e-11!14;UBERON:0003918!9.58e-11!14;UBERON:0005095!9.58e-11!14;UBERON:0007687!9.58e-11!14;UBERON:0001008!1.79e-10!17;UBERON:0003133!7.24e-10!24;UBERON:0006554!8.98e-10!16;UBERON:0000991!2.46e-08!18;UBERON:0005564!2.46e-08!18;UBERON:0004176!1.65e-07!17;UBERON:0009196!1.65e-07!17;UBERON:0009117!1.65e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005156,1.87e-16,26;UBERON:0000990,1.87e-16,26;UBERON:0002113,8.62e-16,14;UBERON:0003918,8.62e-16,14;UBERON:0011143,8.62e-16,14;UBERON:0005095,8.62e-16,14;UBERON:0007687,8.62e-16,14;UBERON:0003133,2.70e-15,24;UBERON:0000474,1.97e-13,9;UBERON:0001008,2.04e-13,19;UBERON:0002102,2.29e-12,7;UBERON:0004710,2.29e-12,7;UBERON:0005419,2.29e-12,7;UBERON:0005417,2.29e-12,7;UBERON:0005729,2.29e-12,7;UBERON:0006554,7.63e-12,18;UBERON:0003134,4.32e-11,8;UBERON:0003100,8.62e-11,11;UBERON:0010708,9.83e-11,8;UBERON:0000991,6.45e-10,18;UBERON:0005564,6.45e-10,18;UBERON:0000489,7.11e-10,21;UBERON:0004175,2.61e-09,9;UBERON:0000992,2.47e-08,3;UBERON:0004176,3.34e-08,17;UBERON:0009196,3.34e-08,17;UBERON:0009117,3.34e-08,17;UBERON:0000026,6.35e-07,12;UBERON:0004708,6.35e-07,12;UBERON:0002101,6.35e-07,12;UBERON:0004357,6.35e-07,12;UBERON:0004347,6.35e-07,12;UBERON:0005732,6.35e-07,12;UBERON:0005733,6.35e-07,12 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.811015449756117,4.40512205188036,0,0,0.659058548203415,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,0,1.26766280701236,0,0,0,0,0,0.599200221036809,0,0.414758449233911,0.135005938331691,0.210324961351382,0,0,0.122490799214954,0,0,0,0,0.153606533256243,0.131886287730194,0,0,0,0,0.45839474333043,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0.259786004602869,1.06001872353102,0.985903938436763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352766121407114,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0.299581278809645,0,0,0.347648640384553,0.511430914660661,0,0.324482526135515,1.32391173005411,0.497627882440372,2.27450482590307,0.210441855886474,1.30120442962704,0.459804208866946,0.360124259610698,0.60281927134286,0.272145996605311,0.2562274405697,0.281105173679186,0,0.862271971731369,1.89106080167819,3.34307135911503,1.53437012699302,2.50242524303038,1.39300866608867,1.23469281844766,5.7719937377363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,1.3377599609307,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32767530667157,1.25673363870702,4.50830942692322,3.05476991767971,1.74557238450863,1.68325967736765,1.64414996523069,0.885660887877613,0.31399745568275,0.370191491765402,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0.321321316421807,1.41940085208269,4.09550888434687,1.79175655288934,5.60898418106621,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.36012218806262,0.388076051348264,0,0.532020700926821,0,0,0,0,0,0.220528398054962,1.15420377059036,0.484393280087717,0.301564624640779,0.238744688006273,0.328281799490123,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,0,6.13017838780313,4.13646226142744,0.972255941720238,1.29159823477731,0.506868376472335,0.352071715937262,0.39061315453185,0,0.483168241652012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.064507229963,5.31139710375069,1.2862102744744,1.00314420807073,0,0.460325236507177,0,0,0,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0,0.31136204275253,1.59609949360412,1.53660245178721,0.243106717068294,0.209613162627982,0.183843508450014,1.11123363900808,0.206035057238894,0.64183841918363,0.505394423527595,0.50695859978048,0.565879024158229,0.0936415074698824,0.384150914429216,0.459483751644906,0.952587382566147,0.811190281613988,0.38581844092741,0,0.147198920134397,0,0.70990322463735,0.476872379894642,0.726732083161643,0.282328141245992,0.338458431566706,0.548783918618318,0,0.135804113845862,1.68342681497322,0.355905054372522,0.689531376628944,0,0.619747364743864,0.771626443924566,0.499621155875892,0.467863216890817,0,0,0,0.231867835620421 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.811015449756117,4.40512205188036,0,0,0.659058548203415,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,0,1.26766280701236,0,0,0,0,0,0.599200221036809,0,0.414758449233911,0.135005938331691,0.210324961351382,0,0,0.122490799214954,0,0,0,0,0.153606533256243,0.131886287730194,0,0,0,0,0.45839474333043,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0.259786004602869,1.06001872353102,0.985903938436763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352766121407114,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0.299581278809645,0,0,0.347648640384553,0.511430914660661,0,0.324482526135515,1.32391173005411,0.497627882440372,2.27450482590307,0.210441855886474,1.30120442962704,0.459804208866946,0.360124259610698,0.60281927134286,0.272145996605311,0.2562274405697,0.281105173679186,0,0.862271971731369,1.89106080167819,3.34307135911503,1.53437012699302,2.50242524303038,1.39300866608867,1.23469281844766,5.7719937377363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,1.3377599609307,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32767530667157,1.25673363870702,4.50830942692322,3.05476991767971,1.74557238450863,1.68325967736765,1.64414996523069,0.885660887877613,0.31399745568275,0.370191491765402,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0.321321316421807,1.41940085208269,4.09550888434687,1.79175655288934,5.60898418106621,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.36012218806262,0.388076051348264,0,0.532020700926821,0,0,0,0,0,0.220528398054962,1.15420377059036,0.484393280087717,0.301564624640779,0.238744688006273,0.328281799490123,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,0,6.13017838780313,4.13646226142744,0.972255941720238,1.29159823477731,0.506868376472335,0.352071715937262,0.39061315453185,0,0.483168241652012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.064507229963,5.31139710375069,1.2862102744744,1.00314420807073,0,0.460325236507177,0,0,0,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0,0.31136204275253,1.59609949360412,1.53660245178721,0.243106717068294,0.209613162627982,0.183843508450014,1.11123363900808,0.206035057238894,0.64183841918363,0.505394423527595,0.50695859978048,0.565879024158229,0.0936415074698824,0.384150914429216,0.459483751644906,0.952587382566147,0.811190281613988,0.38581844092741,0,0.147198920134397,0,0.70990322463735,0.476872379894642,0.726732083161643,0.282328141245992,0.338458431566706,0.548783918618318,0,0.135804113845862,1.68342681497322,0.355905054372522,0.689531376628944,0,0.619747364743864,0.771626443924566,0.499621155875892,0.467863216890817,0,0,0,0.231867835620421 | ||
|short_description=p3@Emx2os | |short_description=p3@Emx2os | ||
}} | }} |
Latest revision as of 02:08, 26 September 2015
Short description: | p3@Emx2os |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Emx2os_5end |
Coexpression cluster: | MCL_coexpression_mm9:1174 |
Association with transcript: | 367bp_to_ENSMUST00000136990, NR_002863, uc012bod.1_5end |
EntrezGene: | Emx2os |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
reproductive structure | 1.87e-16 | 26 |
reproductive system | 1.87e-16 | 26 |
kidney | 8.62e-16 | 14 |
kidney mesenchyme | 8.62e-16 | 14 |
upper urinary tract | 8.62e-16 | 14 |
kidney rudiment | 8.62e-16 | 14 |
kidney field | 8.62e-16 | 14 |
reproductive organ | 2.70e-15 | 24 |
female reproductive system | 1.97e-13 | 9 |
renal system | 2.04e-13 | 19 |
forelimb | 2.29e-12 | 7 |
pectoral appendage | 2.29e-12 | 7 |
pectoral appendage bud | 2.29e-12 | 7 |
forelimb bud | 2.29e-12 | 7 |
forelimb/pectoral fin field | 2.29e-12 | 7 |
urinary system structure | 7.63e-12 | 18 |
female reproductive organ | 4.32e-11 | 8 |
female organism | 8.62e-11 | 11 |
pectoral complex | 9.83e-11 | 8 |
gonad | 6.45e-10 | 18 |
gonad primordium | 6.45e-10 | 18 |
cavitated compound organ | 7.11e-10 | 21 |
internal genitalia | 2.61e-09 | 9 |
female gonad | 2.47e-08 | 3 |
external genitalia | 3.34e-08 | 17 |
indifferent external genitalia | 3.34e-08 | 17 |
indifferent gonad | 3.34e-08 | 17 |
appendage | 6.35e-07 | 12 |
paired limb/fin | 6.35e-07 | 12 |
limb | 6.35e-07 | 12 |
paired limb/fin bud | 6.35e-07 | 12 |
limb bud | 6.35e-07 | 12 |
limb/fin field | 6.35e-07 | 12 |
limb field | 6.35e-07 | 12 |