UBERON:0010708
From FANTOM5_SSTAR
Name: | pectoral complex | |
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Namespace: | FANTOM | |
Definition: | "Appendage girdle complex that when present, encompasses the pectoral appendicular skeleton and the pectoral girdle." [VSAO:0000213] | |
Xrefs: |
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Synonyms: |
"pectoral girdle plus anterior limb or fin" EXACT [UBERON:cjm] "pectoral girdle plus pectoral limb or fin" EXACT [UBERON:cjm] "upper limb" RELATED INCONSISTENT [FMA:7183] | |
Comments: | AO notes: note that the FMA uses the terms 'upper limb' and 'lower limb' to refer to the entire appendage complex (free limb plus girdle region) |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0010707(appendage girdle complex) |
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Children
part of: | UBERON:0001467 (shoulder),UBERON:0002102 (forelimb),UBERON:0004710 (pectoral appendage) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10232-103I7 (chicken wing buds, day03 (HH20))
- 10286-104F7 (Skin - palm, donor1)
- 10314-104I8
- 10342-105C9
- 1063-29H9 (accessory axillary lymph node, adult)
- 1517-43C4 (forelimb, embryo E17)
- 1520-43B5 (forelimb, embryo E18)
- 335-25E2 (forelimb, embryo E11)
- 359-14H2 (forelimb, embryo E12)
- 384-1E2 (forelimb, embryo E13)
... further results Mouse (Mus musculus)
- 10232-103I7 (chicken wing buds, day03 (HH20))
- 10286-104F7 (Skin - palm, donor1)
- 10314-104I8
- 10342-105C9
- 1063-29H9 (accessory axillary lymph node, adult)
- 1517-43C4 (forelimb, embryo E17)
- 1520-43B5 (forelimb, embryo E18)
- 335-25E2 (forelimb, embryo E11)
- 359-14H2 (forelimb, embryo E12)
- 384-1E2 (forelimb, embryo E13)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010708 (pectoral complex), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data