Personal tools

FFCP PHASE1:Mm9::chr10:57786288..57786355,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=110829
|EntrezGene=110829
|HGNC=
|HGNC=
|MCL_coexpression_id=1896
|TSSclassifier=NA
|UniProt=Q99JW4
|UniProt=Q99JW4
|association_with_transcript=74bp_to_ENSMUST00000020078,NM_026148,uc007fcz.2_5end
|association_with_transcript=74bp_to_ENSMUST00000020078,NM_026148,uc007fcz.2_5end
|cluster_id=chr10:57786288..57786355,+
|description=CAGE_peak_1_at_Lims1_5end
|description=CAGE_peak_1_at_Lims1_5end
|id=chr10:57786288..57786355,+
|id=chr10:57786288..57786355,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002048!7.20e-09!14;UBERON:0000117!7.20e-09!14;UBERON:0000171!7.20e-09!14;UBERON:0000170!7.20e-09!14;UBERON:0005597!7.20e-09!14;UBERON:0000118!7.20e-09!14;UBERON:0004872!1.48e-08!33;UBERON:0005153!1.19e-07!17;UBERON:0000926!5.05e-07!193;UBERON:0004120!5.05e-07!193;UBERON:0006603!5.05e-07!193
|ontology_enrichment_uberon_v019_2=UBERON:0005157,4.33e-09,20;UBERON:0002048,7.20e-09,14;UBERON:0000117,7.20e-09,14;UBERON:0000171,7.20e-09,14;UBERON:0000170,7.20e-09,14;UBERON:0005597,7.20e-09,14;UBERON:0000118,7.20e-09,14;UBERON:0004872,1.48e-08,33;UBERON:0005153,1.19e-07,17
|phase1_expression=37.314681375417,10.1202868215415,18.1999695755814,19.660173734944,19.5349334679075,22.9994602519289,18.9226238882376,19.7558684865612,19.1472662126267,21.0658073689794,14.3823093309424,19.1453181588807,16.2640693434645,13.0256399604306,24.3170126125434,30.3712901084739,30.0811607595103,25.0792421459799,32.9074640653773,26.7365480632759,19.8150866051993,26.3121020682346,31.3439746966722,16.3192271249275,17.2056960800378,16.0784949952206,15.5074318617267,15.9448712187558,15.2018735565099,17.1380488236753,13.9690221712842,19.6859508772486,13.5314253268605,0,21.086168241843,19.6156881523021,21.6419517638111,44.7828844888491,37.5040965371424,38.7407570540611,43.5291301142951,35.5183652178392,51.9496077743334,74.153225787615,73.9037828590261,111.229331809979,22.6893489860931,13.0815093828268,14.4992880604751,15.9432517240912,23.2377459898102,15.8127820801469,30.0330864843348,12.3311564141929,15.4603147605533,82.8375384035749,79.6562963029744,58.7866185196284,15.1737345644698,15.340738398889,14.5781222806421,30.1571633541528,27.5681386794453,13.0485459005803,6.92206453796882,14.209602298922,11.3848041996994,7.30014780110954,19.8047159509192,14.7156472781543,14.5124223332454,13.9968982357864,13.693849539,15.923803897944,14.2809751817172,15.6267193723704,9.91042928994498,20.42997409363,18.8936035905179,13.58428763621,15.6443870560121,16.1483144872596,13.1216009530649,11.2552522006336,19.8637722109853,26.2219441071564,22.3523538854592,18.0807462450542,59.0664307998836,59.9282471646809,48.1175051244785,18.0689014166091,12.9194553404473,7.01614149129162,9.09686984426737,6.2723764193627,18.9599967177865,156.795896771813,111.188409970028,112.008645119778,43.661460130771,103.944446705597,78.9896243090602,113.770672504533,20.7831399370766,16.4683912558814,19.2099289105618,16.4424786795446,46.3498811728437,25.9773743363443,29.319020223477,26.4884966131563,27.2126286762149,27.7329658616826,30.2202977338761,30.9139814671002,38.3152199988279,34.7038456607788,40.6920853896942,38.9858108373256,36.4388505459649,37.3353944914121,18.6391761218122,12.8823550685081,14.6612694769419,20.4365644166873,40.497512083001,25.7958174327165,35.325523126312,16.3271796951257,15.0975198930147,10.8062742817063,15.1227158567281,16.8772201838018,16.8308316093244,15.8996437806402,51.6325574721104,39.1881957421793,25.5249986018011,37.8795340595653,25.5036068206899,30.8068819940854,25.9289466919703,29.6888491136359,35.5830890561445,31.515975190073,29.0475346135159,33.631438196072,32.9819029187249,43.3052923584306,37.829491695249,39.2360361045359,35.3120006516509,33.0839558196058,34.7771810529424,37.2194078950582,12.6398373716382,19.3010930336036,25.0063879468122,33.3472493782158,31.4264920374669,36.732660538047,39.0628813715597,37.3852040320067,37.1783742058582,35.345159602062,39.1679166043444,38.1822669540644,39.6589238291488,40.8776985556947,37.0484459624561,34.9417969946544,39.2994706370981,33.8200175276137,14.930586348053,22.433205498684,16.1905203662061,20.3626936330929,41.1646323533002,43.1960209660416,44.0726717721559,39.5299708261751,35.8028650590241,29.8654232996718,27.5226855695817,24.8695421633256,29.9088898472321,39.1944249921067,39.1877815109431,20.6728463990471,27.2333942842115,27.8797782556114,28.4501851429623,36.4452755225035,42.8289395557706,39.3047062741457,38.4025924591899,44.466109810462,46.4156182492048,38.231028326717,38.9356845046609,28.3813477020141,13.0439155918346,30.8663445574774,31.4494392181125,32.1552820710341,33.471920029103,26.5294875727659,29.2819729548633,21.8649064462616,19.6183624397793,25.2596500133035,34.5043695665651,27.9105710751378,25.8991268685085,23.4898356490814,15.0693827358406,21.2275149399882,44.1560124498185,44.1514989425229,66.6526753647886,51.0932708183316,59.6113230652795,65.1599341448663,56.8924301717573,62.4427673144956,78.5023017648831,79.2843588942614,83.8732083138382,51.4530808207417,58.5402088525386,51.0611176792736,28.6503439484617,27.1952841909355,34.4234991113325,33.1124095565679,17.5000143086693,20.0431984072667,66.3936528775535,29.791569410116,50.1658068871848,50.3665980142664,55.1483898195965,48.5106659843681,51.466493713033,44.4430153338467,56.6734982344852,45.884169692076,55.7355766904598,15.7447445046685,54.7888728903917,28.3124309830936,45.6083486190013,76.3811669362839,7.96470830039777,20.3935734370184,16.6277956330613,23.9528451289991,15.9463022155617,31.9732553861685,38.2473873888967,38.5345753246156,33.8672509465485,26.5470876666085,18.9753495434998,13.4076206222643,22.8094535855038,32.4109969256358,16.4285528404098,22.2910516432856,29.2611385509751,26.9336914579127,26.3278432963394,13.0919928119278,46.2303264885509,46.6030555900404,20.9501978152214,29.5146392765249,36.8138892866665,44.0284351975538,37.1247989849754,33.6488844477376,26.2332752966866,26.8866687915239,27.85195357005,47.8817533674676,41.113185076076,32.7761115188162,36.0872761183506,38.6635112719023,43.8544349384147,39.6062610075952,39.8015924556741,23.8667654503778,41.1236791655476,53.6763393214881,42.2300882613243,46.2085134191976,40.615436856789,46.5281995027631,56.2043498932284,31.6724689800676,31.3668235366139,27.3389297758247,6.20062232552609,44.5559307211057,39.048203747875,43.7515173774107,36.6813898676756,37.8461721099343,40.4882473327851,47.2641916983539,28.6266010282191,12.5623742829523,12.6733202753461,27.8089786152797,26.1515527724312,29.4780447063054,29.6219476389373,26.1378975674523,27.020664250252,26.6833897934331,25.1072196196781,24.635813787348,29.4920341754849,25.5090248396207,23.2924334968008,27.6127985507746,29.2192255453922,25.6205333485189,34.185836819606,43.3317927423768,41.4675002419274,49.8429152603051,77.325179885887,49.084635303627,34.5133090317296,32.1006146582633,14.6835479080437,17.9526842237799,17.1868654031819,14.6075204992134,17.1270629942661,9.82012066606611,18.2256075062588,15.3109209096235,19.0319811773366,12.9440077937955,27.5036471098068,42.6956614539103,33.4637867278103,37.4384344285173,31.8612007194533,26.8411522337021,31.3367886200277,31.7293988147897,34.0174362167324,30.5763626234195,29.6570780871581,30.9347199873165,32.0253955546998,33.5491798601515,36.2992163799476,36.6746142287967,35.8082567169603,37.6172979904225,29.6701848578381,31.2061710684922,26.400932433677,26.0889435054226,31.950449452941,33.2843294088032,33.314720667027,33.4227701172122,31.4636113341169,32.6206442182925,31.5065544122399,31.4239672128334,34.4041552560105,34.3780643490716,32.7384834535751,35.1706629492143,36.2664428644546,25.2308683717325,38.364783785047,33.7347554855828,37.3012247534245,40.3682296988713,43.8230209322597
|phase1_expression=37.314681375417,10.1202868215415,18.1999695755814,19.660173734944,19.5349334679075,22.9994602519289,18.9226238882376,19.7558684865612,19.1472662126267,21.0658073689794,14.3823093309424,19.1453181588807,16.2640693434645,13.0256399604306,24.3170126125434,30.3712901084739,30.0811607595103,25.0792421459799,32.9074640653773,26.7365480632759,19.8150866051993,26.3121020682346,31.3439746966722,16.3192271249275,17.2056960800378,16.0784949952206,15.5074318617267,15.9448712187558,15.2018735565099,17.1380488236753,13.9690221712842,19.6859508772486,13.5314253268605,0,21.086168241843,19.6156881523021,21.6419517638111,44.7828844888491,37.5040965371424,38.7407570540611,43.5291301142951,35.5183652178392,51.9496077743334,74.153225787615,73.9037828590261,111.229331809979,22.6893489860931,13.0815093828268,14.4992880604751,15.9432517240912,23.2377459898102,15.8127820801469,30.0330864843348,12.3311564141929,15.4603147605533,82.8375384035749,79.6562963029744,58.7866185196284,15.1737345644698,15.340738398889,14.5781222806421,30.1571633541528,27.5681386794453,13.0485459005803,6.92206453796882,14.209602298922,11.3848041996994,7.30014780110954,19.8047159509192,14.7156472781543,14.5124223332454,13.9968982357864,13.693849539,15.923803897944,14.2809751817172,15.6267193723704,9.91042928994498,20.42997409363,18.8936035905179,13.58428763621,15.6443870560121,16.1483144872596,13.1216009530649,11.2552522006336,19.8637722109853,26.2219441071564,22.3523538854592,18.0807462450542,59.0664307998836,59.9282471646809,48.1175051244785,18.0689014166091,12.9194553404473,7.01614149129162,9.09686984426737,6.2723764193627,18.9599967177865,156.795896771813,111.188409970028,112.008645119778,43.661460130771,103.944446705597,78.9896243090602,113.770672504533,20.7831399370766,16.4683912558814,19.2099289105618,16.4424786795446,46.3498811728437,25.9773743363443,29.319020223477,26.4884966131563,27.2126286762149,27.7329658616826,30.2202977338761,30.9139814671002,38.3152199988279,34.7038456607788,40.6920853896942,38.9858108373256,36.4388505459649,37.3353944914121,18.6391761218122,12.8823550685081,14.6612694769419,20.4365644166873,40.497512083001,25.7958174327165,35.325523126312,16.3271796951257,15.0975198930147,10.8062742817063,15.1227158567281,16.8772201838018,16.8308316093244,15.8996437806402,51.6325574721104,39.1881957421793,25.5249986018011,37.8795340595653,25.5036068206899,30.8068819940854,25.9289466919703,29.6888491136359,35.5830890561445,31.515975190073,29.0475346135159,33.631438196072,32.9819029187249,43.3052923584306,37.829491695249,39.2360361045359,35.3120006516509,33.0839558196058,34.7771810529424,37.2194078950582,12.6398373716382,19.3010930336036,25.0063879468122,33.3472493782158,31.4264920374669,36.732660538047,39.0628813715597,37.3852040320067,37.1783742058582,35.345159602062,39.1679166043444,38.1822669540644,39.6589238291488,40.8776985556947,37.0484459624561,34.9417969946544,39.2994706370981,33.8200175276137,14.930586348053,22.433205498684,16.1905203662061,20.3626936330929,41.1646323533002,43.1960209660416,44.0726717721559,39.5299708261751,35.8028650590241,29.8654232996718,27.5226855695817,24.8695421633256,29.9088898472321,39.1944249921067,39.1877815109431,20.6728463990471,27.2333942842115,27.8797782556114,28.4501851429623,36.4452755225035,42.8289395557706,39.3047062741457,38.4025924591899,44.466109810462,46.4156182492048,38.231028326717,38.9356845046609,28.3813477020141,13.0439155918346,30.8663445574774,31.4494392181125,32.1552820710341,33.471920029103,26.5294875727659,29.2819729548633,21.8649064462616,19.6183624397793,25.2596500133035,34.5043695665651,27.9105710751378,25.8991268685085,23.4898356490814,15.0693827358406,21.2275149399882,44.1560124498185,44.1514989425229,66.6526753647886,51.0932708183316,59.6113230652795,65.1599341448663,56.8924301717573,62.4427673144956,78.5023017648831,79.2843588942614,83.8732083138382,51.4530808207417,58.5402088525386,51.0611176792736,28.6503439484617,27.1952841909355,34.4234991113325,33.1124095565679,17.5000143086693,20.0431984072667,66.3936528775535,29.791569410116,50.1658068871848,50.3665980142664,55.1483898195965,48.5106659843681,51.466493713033,44.4430153338467,56.6734982344852,45.884169692076,55.7355766904598,15.7447445046685,54.7888728903917,28.3124309830936,45.6083486190013,76.3811669362839,7.96470830039777,20.3935734370184,16.6277956330613,23.9528451289991,15.9463022155617,31.9732553861685,38.2473873888967,38.5345753246156,33.8672509465485,26.5470876666085,18.9753495434998,13.4076206222643,22.8094535855038,32.4109969256358,16.4285528404098,22.2910516432856,29.2611385509751,26.9336914579127,26.3278432963394,13.0919928119278,46.2303264885509,46.6030555900404,20.9501978152214,29.5146392765249,36.8138892866665,44.0284351975538,37.1247989849754,33.6488844477376,26.2332752966866,26.8866687915239,27.85195357005,47.8817533674676,41.113185076076,32.7761115188162,36.0872761183506,38.6635112719023,43.8544349384147,39.6062610075952,39.8015924556741,23.8667654503778,41.1236791655476,53.6763393214881,42.2300882613243,46.2085134191976,40.615436856789,46.5281995027631,56.2043498932284,31.6724689800676,31.3668235366139,27.3389297758247,6.20062232552609,44.5559307211057,39.048203747875,43.7515173774107,36.6813898676756,37.8461721099343,40.4882473327851,47.2641916983539,28.6266010282191,12.5623742829523,12.6733202753461,27.8089786152797,26.1515527724312,29.4780447063054,29.6219476389373,26.1378975674523,27.020664250252,26.6833897934331,25.1072196196781,24.635813787348,29.4920341754849,25.5090248396207,23.2924334968008,27.6127985507746,29.2192255453922,25.6205333485189,34.185836819606,43.3317927423768,41.4675002419274,49.8429152603051,77.325179885887,49.084635303627,34.5133090317296,32.1006146582633,14.6835479080437,17.9526842237799,17.1868654031819,14.6075204992134,17.1270629942661,9.82012066606611,18.2256075062588,15.3109209096235,19.0319811773366,12.9440077937955,27.5036471098068,42.6956614539103,33.4637867278103,37.4384344285173,31.8612007194533,26.8411522337021,31.3367886200277,31.7293988147897,34.0174362167324,30.5763626234195,29.6570780871581,30.9347199873165,32.0253955546998,33.5491798601515,36.2992163799476,36.6746142287967,35.8082567169603,37.6172979904225,29.6701848578381,31.2061710684922,26.400932433677,26.0889435054226,31.950449452941,33.2843294088032,33.314720667027,33.4227701172122,31.4636113341169,32.6206442182925,31.5065544122399,31.4239672128334,34.4041552560105,34.3780643490716,32.7384834535751,35.1706629492143,36.2664428644546,25.2308683717325,38.364783785047,33.7347554855828,37.3012247534245,40.3682296988713,43.8230209322597
|short_description=p1@Lims1
|short_description=p1@Lims1
}}
}}

Latest revision as of 02:38, 26 September 2015

Short description:p1@Lims1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lims1_5end
Coexpression cluster:MCL_coexpression_mm9:1896
Association with transcript: 74bp_to_ENSMUST00000020078, NM_026148, uc007fcz.2_5end
EntrezGene:Lims1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lims1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G737.31
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I510.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I618.20
CD326+ enterocyte, pool1.CNhs13542.11848-124I319.66
CD326+ enterocyte, pool2.CNhs13197.11849-124I419.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I723.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I818.92
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E919.76
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E719.15
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F221.07
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E614.38
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F119.15
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E416.26
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E813.03
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A124.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A330.37
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A530.08
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A225.08
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A432.91
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A626.74
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A319.82
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H226.31
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I931.34
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D116.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D217.21
GP2+ M cell, pool1.CNhs13228.11845-124H916.08
GP2+ M cell, pool2.CNhs13231.11846-124I115.51
GP2+ M cell, pool3.CNhs13240.11847-124I215.94
Ileum epithelium, pool1.CNhs13199.10252-104B915.20
Ileum epithelium, pool2.CNhs13232.10253-104C117.14
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C813.97
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I319.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G613.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F521.09
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F619.62
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F721.64
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G844.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H137.50
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H338.74
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G943.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H235.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H451.95
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D874.15
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D973.90
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3111.23
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B722.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C213.08
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B814.50
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C315.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C423.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C415.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A230.03
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I912.33
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A115.46
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C182.84
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E179.66
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C558.79
Mouse Granule cells, donor1.CNhs12131.11713-123C315.17
Mouse Granule cells, donor2.CNhs12357.11731-123E315.34
Mouse Granule cells, donor3.CNhs12108.11636-122C714.58
Mouse Meningeal cells, donor1.CNhs12132.11716-123C630.16
Mouse Meningeal cells, donor3.CNhs12109.11639-122D127.57
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C713.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D214.21
Mouse Microglia, donor1.CNhs12629.11718-123C811.38
Mouse Microglia, donor2.CNhs12634.11736-123E87.30
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D519.80
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.72
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D914.51
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.69
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D215.92
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F214.28
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D615.63
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F320.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D718.89
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D413.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F415.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D816.15
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I619.86
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D626.22
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F622.35
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E118.08
Mouse Schwann, donor1.CNhs12507.11728-123D959.07
Mouse Schwann, donor2.CNhs12573.11746-123F959.93
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G348.12
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F718.07
Mouse hepatocyte, donor1.CNhs13078.11714-123C412.92
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.02
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.10
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.27
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A718.96
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7156.80
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3111.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8112.01
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G643.66
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1103.94
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I878.99
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6113.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G120.78
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G216.47
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G319.21
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B616.44
accessory axillary lymph node, adult.CNhs10475.1063-29H946.35
adrenal gland, adult.CNhs10508.49-24D725.98
adrenal gland, embryo E14.CNhs11038.406-44C529.32
adrenal gland, embryo E16.CNhs11004.1254-43D626.49
adrenal gland, embryo E17.CNhs11043.1263-45I127.21
adrenal gland, embryo E18.CNhs11026.1262-18F527.73
adrenal gland, neonate N00.CNhs11191.1311-23C130.22
adrenal gland, neonate N25.CNhs11223.1377-27I330.91
amnion, adult pregnant day17.5.CNhs10488.583-22A838.32
aorta, adult.CNhs10498.46-23H134.70
bone (os femoris), adult.CNhs10483.56-12G240.69
bone (os femoris), neonate N02.CNhs11227.1985-43F538.99
bone (os femoris), neonate N16.CNhs11225.1525-43A636.44
bone (os femoris), neonate N20.CNhs11195.1350-25C337.34
cecum, adult.CNhs10467.37-13H418.64
cerebellum, adult.CNhs10494.15-8B212.88
cerebellum, neonate N30.CNhs11135.1395-42I214.66
colon, adult.CNhs10468.36-18H720.44
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C740.50
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D125.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D435.33
corpora quadrigemina, adult.CNhs10501.16-22A416.33
corpus striatum, adult.CNhs10487.19-21D815.10
corpus striatum, neonate N00.CNhs11226.630-43F110.81
cortex, adult.CNhs10473.12-14D515.12
cortex, neonate N30.CNhs11107.1392-42F216.88
diencephalon, adult.CNhs10482.20-12F216.83
diencephalon, neonate N30.CNhs11201.1388-42B215.90
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B151.63
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A239.19
epididymis, adult.CNhs10490.58-23B225.52
eyeball, adult.CNhs10484.31-12G437.88
eyeball, embryo E12.CNhs11016.345-16C625.50
eyeball, embryo E14.CNhs10521.399-16E230.81
eyeball, embryo E15.CNhs10593.426-16C925.93
eyeball, embryo E17.CNhs11023.1261-18D429.69
eyeball, neonate N00.CNhs11207.633-15C635.58
eyeball, neonate N01.CNhs11140.1532-43E731.52
eyeball, neonate N02.CNhs11205.1551-44G829.05
eyeball, neonate N16.CNhs11188.777-19A233.63
forelimb, embryo E11.CNhs10596.335-25E232.98
forelimb, embryo E12.CNhs10600.359-14H243.31
forelimb, embryo E13.CNhs10589.384-1E237.83
forelimb, embryo E14.CNhs10577.413-26A839.24
forelimb, embryo E15.CNhs11007.437-20E735.31
forelimb, embryo E17.CNhs10598.1517-43C433.08
forelimb, embryo E18.CNhs11008.1520-43B534.78
gonad, embryo E13.CNhs11044.1564-45I637.22
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C812.64
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D219.30
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D525.01
heart, embryo E11.CNhs10586.331-24E933.35
heart, embryo E12.CNhs11015.353-12F531.43
heart, embryo E13.CNhs11013.376-3I936.73
heart, embryo E14.CNhs10597.403-26D439.06
heart, embryo E15.CNhs11017.431-16C837.39
heart, embryo E16.CNhs11021.457-17C637.18
heart, embryo E17.CNhs11025.479-18E535.35
heart, embryo E18.CNhs11030.1283-20G339.17
heart, neonate N00.CNhs11213.639-21E338.18
heart, neonate N03.CNhs11221.1349-25I239.66
heart, neonate N10.CNhs11118.749-24G140.88
heart, neonate N16.CNhs11209.782-15G137.05
heart, neonate N20.CNhs11127.821-26I634.94
heart, neonate N25.CNhs11196.1351-25D339.30
heart, neonate N30.CNhs11202.1390-42D233.82
hippocampus, adult.CNhs10478.13-16E814.93
hippocampus, neonate N00.CNhs11228.627-43G122.43
intestinal mucosa, adult.CNhs10506.860-29I316.19
intestine, adult.CNhs10496.178-9A320.36
intestine, embryo E12.CNhs11019.1251-16I541.16
intestine, embryo E13.CNhs11010.381-16D543.20
intestine, embryo E15.CNhs10602.976-16D844.07
intestine, embryo E16.CNhs10585.463-22H439.53
intestine, embryo E17.CNhs10582.482-18D335.80
intestine, embryo E18.CNhs10526.1289-20F729.87
intestine, neonate N00.CNhs11126.644-26D127.52
intestine, neonate N01.CNhs11192.1322-23E924.87
intestine, neonate N06.CNhs11102.688-20B829.91
intestine, neonate N07.CNhs11095.720-20F239.19
intestine, neonate N10.CNhs11098.755-23A539.19
intestine, neonate N20.CNhs11187.827-18D120.67
intestine, neonate N25.CNhs11121.1352-25E327.23
intestine, neonate N30.CNhs11131.1384-42G127.88
kidney, embryo E14.CNhs10606.411-4I928.45
kidney, embryo E15.CNhs10997.434-16F836.45
kidney, embryo E16.CNhs10584.464-22A542.83
kidney, embryo E17.CNhs11028.483-18I239.30
kidney, embryo E18.CNhs11001.1288-20C738.40
kidney, neonate N00.CNhs11214.646-21G744.47
kidney, neonate N10.CNhs11206.758-6D546.42
kidney, neonate N20.CNhs11113.832-19I138.23
kidney, neonate N25.CNhs11122.1353-25F338.94
kidney, neonate N30.CNhs11203.1385-42H128.38
liver, adult pregnant day01.CNhs10466.508-5B213.04
liver, embryo E12.CNhs10601.355-15F830.87
liver, embryo E13.CNhs10524.378-3H631.45
liver, embryo E14.CNhs10594.409-16E132.16
liver, embryo E15.CNhs10520.433-16D733.47
liver, embryo E16.CNhs10523.462-17F526.53
liver, embryo E17.CNhs10510.481-18A329.28
liver, embryo E18.CNhs10579.499-43G421.86
liver, neonate N00.CNhs11117.641-24F419.62
liver, neonate N03.CNhs11123.1345-25G225.26
liver, neonate N06.CNhs11101.684-20A834.50
liver, neonate N07.CNhs11103.716-20H227.91
liver, neonate N10.CNhs11115.751-24B925.90
liver, neonate N20.CNhs11220.823-25A323.49
liver, neonate N25.CNhs11198.1368-26H115.07
liver, neonate N30.CNhs11106.1382-42D121.23
lung, adult.CNhs10474.28-22B144.16
lung, embryo E12.CNhs10522.354-16G244.15
lung, embryo E14.CNhs10604.404-26F866.65
lung, embryo E15.CNhs11020.432-17C551.09
lung, embryo E16.CNhs10998.458-17B659.61
lung, embryo E17.CNhs10605.480-44A665.16
lung, embryo E18.CNhs10583.1287-20I656.89
lung, neonate N00.CNhs11224.640-42C662.44
lung, neonate N06.CNhs11212.683-20E578.50
lung, neonate N07.CNhs11111.715-19A379.28
lung, neonate N10.CNhs11219.750-23E683.87
lung, neonate N20.CNhs11109.822-18A451.45
lung, neonate N25.CNhs11119.1359-25C758.54
lung, neonate N30.CNhs11133.1394-42H251.06
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A128.65
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A127.20
mammary gland, adult lactating day02.CNhs10480.595-22B634.42
mammary gland, adult pregnant day19.CNhs10476.588-5H233.11
medulla oblongata, adult.CNhs10477.17-12C217.50
medulla oblongata, neonate N30.CNhs11200.1396-42A320.04
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C766.39
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C229.79
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E150.17
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E250.37
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E355.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D748.51
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D851.47
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D944.44
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D456.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D545.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D655.74
olfactory brain, adult.CNhs10489.18-22I915.74
ovary, adult.CNhs10507.91-2I754.79
ovary, embryo E18.CNhs11040.505-44H728.31
ovary, neonate N00.CNhs11217.1299-22I445.61
oviduct, adult pregnant day01.CNhs10500.988-6G676.38
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F420.39
pancreas, embryo E15.CNhs11042.1556-45F216.63
pancreas, embryo E16.CNhs11003.460-26E523.95
pancreas, embryo E17.CNhs10599.1558-45G315.95
pancreas, embryo E18.CNhs10580.1535-43I731.97
pancreas, neonate N00.CNhs11105.645-26G938.25
pancreas, neonate N01.CNhs11138.1531-43D738.53
pancreas, neonate N02.CNhs11139.1539-43D833.87
pancreas, neonate N16.CNhs11136.787-43B626.55
pancreas, neonate N25.CNhs11094.1555-45E218.98
pancreas, neonate N30.CNhs11182.1548-44H513.41
pituitary gland, adult.CNhs10493.21-1G822.81
pituitary gland, embryo E12.CNhs11018.346-16E632.41
pituitary gland, embryo E13.CNhs11009.370-44C716.43
pituitary gland, embryo E14.CNhs11037.398-44A522.29
pituitary gland, embryo E15.CNhs10592.427-16B929.26
pituitary gland, embryo E16.CNhs11036.449-43F626.93
pituitary gland, embryo E17.CNhs11039.1265-44F526.33
pituitary gland, neonate N00.CNhs11190.1308-22E913.09
placenta, adult pregnant day10.CNhs10472.539-13I746.23
placenta, adult pregnant day17.CNhs10464.577-18G346.60
prostate, adult.CNhs10470.859-1F820.95
skin, adult.CNhs10492.30-1C329.51
skin, neonate N00.CNhs11124.650-25G436.81
skin, neonate N03.CNhs11215.662-22H344.03
skin, neonate N06.CNhs11097.693-20I537.12
skin, neonate N10.CNhs11108.762-6C433.65
small intestine, neonate N16.CNhs11114.790-21I126.23
spinal cord, adult.CNhs10505.24-13C926.89
spleen, adult.CNhs10465.25-2G227.85
spleen, embryo E16.CNhs11035.461-43C147.88
spleen, embryo E18.CNhs11011.1271-21F241.11
spleen, neonate N10.CNhs11116.752-24D132.78
spleen, neonate N20.CNhs11112.824-19H136.09
spleen, neonate N25.CNhs11099.1354-25G338.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C643.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C939.61
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D339.80
stomach, adult.CNhs10503.33-1H623.87
stomach, embryo E12.CNhs10588.356-43E341.12
stomach, embryo E15.CNhs10603.1252-16G853.68
stomach, embryo E16.CNhs11022.459-17D442.23
stomach, embryo E17.CNhs11006.1035-18D546.21
stomach, embryo E18.CNhs10999.1286-20C640.62
stomach, neonate N03.CNhs11193.1340-24B846.53
stomach, neonate N07.CNhs11210.718-18A956.20
stomach, neonate N25.CNhs11104.1355-25E431.67
stomach, neonate N30.CNhs11134.1386-42I131.37
submandibular gland, adult.CNhs10469.59-29C127.34
testis, adult.CNhs10504.57-7G56.20
testis, embryo E13.CNhs11031.389-23F544.56
testis, embryo E15.CNhs11034.443-27C539.05
testis, embryo E16.CNhs11033.470-26G543.75
testis, embryo E17.CNhs11029.486-18I536.68
testis, embryo E18.CNhs11027.503-18G537.85
testis, neonate N00.CNhs11189.1300-22B740.49
testis, neonate N07.CNhs11222.726-26I447.26
testis, neonate N10.CNhs11204.763-44D928.63
testis, neonate N20.CNhs11110.839-18H312.56
testis, neonate N30.CNhs11130.1391-42E212.67
thymus, adult.CNhs10471.38-12B527.81
thymus, embryo E14.CNhs11041.402-44I426.15
thymus, embryo E15.CNhs11005.430-45I229.48
thymus, embryo E16.CNhs11002.456-26C529.62
thymus, embryo E17.CNhs10581.478-18C126.14
thymus, embryo E18.CNhs10595.1273-19G427.02
thymus, neonate N02.CNhs11181.1541-43F826.68
thymus, neonate N03.CNhs11137.2104-43C725.11
thymus, neonate N06.CNhs11197.681-26C424.64
thymus, neonate N07.CNhs11211.713-19D329.49
thymus, neonate N10.CNhs11194.748-24E425.51
thymus, neonate N20.CNhs11186.820-7A223.29
thymus, neonate N25.CNhs11125.1362-25G727.61
thymus, neonate N30.CNhs11132.1393-42G229.22
tongue, adult.CNhs10499.32-1B425.62
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H334.19
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F743.33
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G541.47
urinary bladder, adult.CNhs10481.879-12E449.84
uterus, adult pregnant day19.CNhs10497.590-15F577.33
uterus, adult.CNhs10509.92-27E549.08
vagina, adult.CNhs10502.89-27D534.51
vesicular gland, adult.CNhs10491.51-27F832.10
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.68
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A217.95
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A317.19
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.13
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A618.23
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A715.31
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.03
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I827.50
whole body, embryo E12.CNhs10587.857-27C942.70
whole body, embryo E13.CNhs10512.372-23H233.46
whole body, embryo E14.5.CNhs10578.420-27D237.44
whole body, embryo E14.CNhs10519.395-14B131.86
whole body, embryo E16.CNhs10514.453-14F226.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G531.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G531.73
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G534.02
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G530.58
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G529.66
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G530.93
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G532.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G533.55
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G536.30
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G536.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G535.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G537.62
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G529.67
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G531.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G526.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G526.09
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G531.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G533.28
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G533.31
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G533.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G531.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G532.62
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G531.51
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G531.42
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G534.40
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G534.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G532.74
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G535.17
whole body, embryo E17.5.CNhs10513.490-9F936.27
whole body, embryo E17.CNhs10517.475-3I525.23
whole body, embryo E18.CNhs10516.493-3B338.36
whole body, neonate N00.CNhs10525.657-19C233.73
whole body, neonate N01.CNhs10576.659-23C637.30
whole body, neonate N06.CNhs10515.692-21D140.37
whole body, neonate N10.CNhs10518.761-6B443.82





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
epithelial fold4.33e-0920
lung7.20e-0914
respiratory tube7.20e-0914
respiration organ7.20e-0914
pair of lungs7.20e-0914
lung primordium7.20e-0914
lung bud7.20e-0914
splanchnic layer of lateral plate mesoderm1.48e-0833
epithelial bud1.19e-0717
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr10:57786288..57786355,%2B&oldid=4228341"