FFCP PHASE2:Mm9::chr7:148106795..148106810,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:101613 |HGNC= |MCL_coexpression_id=12 |TSSclassifier=NA |UniProt=uniprot:E9QNS0,uniprot:Q91WS2 |association_with_tr...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=101613 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |MCL_coexpression_id=12 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=E9QNS0,Q91WS2 | ||
|association_with_transcript=0bp_to_ENSMUST00000106045,NM_001081389,uc009kiu.1,uc009kiv.2_5end | |association_with_transcript=0bp_to_ENSMUST00000106045,NM_001081389,uc009kiu.1,uc009kiv.2_5end | ||
|cluster_id=chr7:148106795..148106810,+ | |cluster_id=chr7:148106795..148106810,+ | ||
Latest revision as of 03:08, 26 September 2015
| Short description: | p1@Nlrp6 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Nlrp6_5end |
| Coexpression cluster: | MCL_coexpression_mm9:12 |
| Association with transcript: | 0bp_to_ENSMUST00000106045, NM_001081389, uc009kiu.1, uc009kiv.2_5end |
| EntrezGene: | Nlrp6 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@Nlrp6 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| intestinal epithelial cell | 7.99e-13 | 9 |
| epithelial cell of alimentary canal | 7.99e-13 | 9 |
| brush border epithelial cell | 5.54e-09 | 6 |
| gut absorptive cell | 5.54e-09 | 6 |
| enterocyte | 5.54e-09 | 6 |
| columnar/cuboidal epithelial cell | 1.57e-07 | 7 |
| endo-epithelial cell | 9.50e-07 | 15 |
Showing 1 to 7 of 7 entries
| Ontology term | p-value | n |
|---|---|---|
| intestine | 1.12e-35 | 31 |
| gastrointestinal system | 5.70e-27 | 47 |
| mucosa | 1.44e-20 | 15 |
| intestinal mucosa | 4.02e-18 | 13 |
| wall of intestine | 4.02e-18 | 13 |
| gastrointestinal system mucosa | 4.02e-18 | 13 |
| epithelium of mucosa | 7.99e-13 | 9 |
| gastrointestinal system epithelium | 7.99e-13 | 9 |
| intestinal epithelium | 7.99e-13 | 9 |
| organ component layer | 4.68e-11 | 24 |
Showing 1 to 10 of 18 entries
