FFCP PHASE1:Mm9::chr14:56247194..56247210,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=75751 | |EntrezGene=75751 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-433bp_to_ENSMUST00000126064_5end | |association_with_transcript=-433bp_to_ENSMUST00000126064_5end | ||
|cluster_id=chr14:56247194..56247210,- | |||
|description=CAGE_peak_2_at_Ipo4_5end | |description=CAGE_peak_2_at_Ipo4_5end | ||
|id=chr14:56247194..56247210,- | |id=chr14:56247194..56247210,- | ||
|ontology_enrichment_celltype=CL:0000239!3.16e-23!6;CL:0000677!3.16e-23!6;CL:0000212!3.16e-23!6;CL:0000584!3.16e-23!6;CL:0000075!7.74e-20!7;CL:0002563!2.60e-15!9;CL:0002251!2.60e-15!9;CL:0000473!7.39e-13!3;CL:0000627!7.39e-13!3;CL:0000682!7.39e-13!3;CL:0000066!1.63e-11!25;CL:0002076!5.89e-09!15 | |ontology_enrichment_celltype=CL:0000239!3.16e-23!6;CL:0000677!3.16e-23!6;CL:0000212!3.16e-23!6;CL:0000584!3.16e-23!6;CL:0000075!7.74e-20!7;CL:0002563!2.60e-15!9;CL:0002251!2.60e-15!9;CL:0000473!7.39e-13!3;CL:0000627!7.39e-13!3;CL:0000682!7.39e-13!3;CL:0000066!1.63e-11!25;CL:0002076!5.89e-09!15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.21e-26,6;CL:0000677,1.21e-26,6;CL:0000584,1.21e-26,6;CL:0000075,7.50e-23,7;CL:0000682,2.98e-20,3;CL:0002563,8.72e-18,9;CL:0002251,8.72e-18,9;CL:0000066,8.37e-16,25;CL:0002076,1.15e-10,15;CL:0000473,5.21e-09,7;CL:0000223,5.61e-08,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.29e-29!15;UBERON:0000160!9.01e-25!43;UBERON:0001242!1.11e-22!13;UBERON:0000060!1.11e-22!13;UBERON:0001262!1.11e-22!13;UBERON:0004786!1.11e-22!13;UBERON:0004923!1.23e-17!24;UBERON:0005409!3.54e-17!59;UBERON:0003350!2.60e-15!9;UBERON:0004808!2.60e-15!9;UBERON:0001277!2.60e-15!9;UBERON:0000485!2.00e-12!11;UBERON:0001962!7.47e-09!2;UBERON:0001961!7.47e-09!2;UBERON:0001744!7.47e-09!2;UBERON:0001007!3.64e-08!128;UBERON:0001555!3.64e-08!128;UBERON:0007026!3.64e-08!128;UBERON:0004119!5.54e-08!130;UBERON:0000925!5.54e-08!130;UBERON:0006595!5.54e-08!130 | |ontology_enrichment_uberon=UBERON:0000344!2.29e-29!15;UBERON:0000160!9.01e-25!43;UBERON:0001242!1.11e-22!13;UBERON:0000060!1.11e-22!13;UBERON:0001262!1.11e-22!13;UBERON:0004786!1.11e-22!13;UBERON:0004923!1.23e-17!24;UBERON:0005409!3.54e-17!59;UBERON:0003350!2.60e-15!9;UBERON:0004808!2.60e-15!9;UBERON:0001277!2.60e-15!9;UBERON:0000485!2.00e-12!11;UBERON:0001962!7.47e-09!2;UBERON:0001961!7.47e-09!2;UBERON:0001744!7.47e-09!2;UBERON:0001007!3.64e-08!128;UBERON:0001555!3.64e-08!128;UBERON:0007026!3.64e-08!128;UBERON:0004119!5.54e-08!130;UBERON:0000925!5.54e-08!130;UBERON:0006595!5.54e-08!130 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.89e-33,15;UBERON:0001242,2.80e-23,13;UBERON:0001262,2.80e-23,13;UBERON:0004786,2.80e-23,13;UBERON:0004923,2.05e-20,24;UBERON:0003350,8.72e-18,9;UBERON:0004808,8.72e-18,9;UBERON:0001277,8.72e-18,9;UBERON:0000160,1.98e-15,31;UBERON:0000485,1.48e-14,11;UBERON:0001962,1.27e-13,2;UBERON:0001961,1.27e-13,2;UBERON:0001744,1.27e-13,2;UBERON:0005409,7.35e-10,47;UBERON:0002465,2.17e-09,3;UBERON:0003199,9.86e-08,1 | |||
|phase1_expression=0,16.40184415905,16.8349718574128,2.41971369045464,2.50447864973174,1.51091344720701,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3998863419011,2.98232065387321,14.3557991028755,6.8921919385452,6.03319451520489,0,0.252030129759931,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,1.58670339998127,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0.432276099749388,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,16.40184415905,16.8349718574128,2.41971369045464,2.50447864973174,1.51091344720701,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3998863419011,2.98232065387321,14.3557991028755,6.8921919385452,6.03319451520489,0,0.252030129759931,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,1.58670339998127,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0.432276099749388,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@Ipo4 | |short_description=p2@Ipo4 | ||
}} | }} |
Latest revision as of 03:42, 26 September 2015
Short description: | p2@Ipo4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ipo4_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | -433bp_to_ENSMUST00000126064_5end |
EntrezGene: | Ipo4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.21e-26 | 6 |
gut absorptive cell | 1.21e-26 | 6 |
enterocyte | 1.21e-26 | 6 |
columnar/cuboidal epithelial cell | 7.50e-23 | 7 |
M cell of gut | 2.98e-20 | 3 |
intestinal epithelial cell | 8.72e-18 | 9 |
epithelial cell of alimentary canal | 8.72e-18 | 9 |
epithelial cell | 8.37e-16 | 25 |
endo-epithelial cell | 1.15e-10 | 15 |
defensive cell | 5.21e-09 | 7 |
endodermal cell | 5.61e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.89e-33 | 15 |
intestinal mucosa | 2.80e-23 | 13 |
wall of intestine | 2.80e-23 | 13 |
gastrointestinal system mucosa | 2.80e-23 | 13 |
organ component layer | 2.05e-20 | 24 |
epithelium of mucosa | 8.72e-18 | 9 |
gastrointestinal system epithelium | 8.72e-18 | 9 |
intestinal epithelium | 8.72e-18 | 9 |
intestine | 1.98e-15 | 31 |
simple columnar epithelium | 1.48e-14 | 11 |
gut-associated lymphoid tissue | 1.27e-13 | 2 |
mucosa-associated lymphoid tissue | 1.27e-13 | 2 |
lymphoid tissue | 1.27e-13 | 2 |
gastrointestinal system | 7.35e-10 | 47 |
lymphoid system | 2.17e-09 | 3 |
egg chamber | 9.86e-08 | 1 |