FFCP PHASE1:Mm9::chr9:108419307..108419337,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr9:108419307..108419337,+ to FFCP PHASE1:Mm9::chr9:108419307..108419337,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=69232 | |EntrezGene=69232 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=G3X8R5,Q3UA37,Q8BUN3 | |UniProt=G3X8R5,Q3UA37,Q8BUN3 | ||
|association_with_transcript=-80bp_to_ENSMUST00000006851,ENSMUST00000112155,NM_001114119,NM_175143,uc009rqb.2,uc009rqc.2,uc009rqd.2,uc009rqe.2_5end | |||
|cluster_id=chr9:108419307..108419337,+ | |||
|description=CAGE_peak_9_at_Qrich1_5end | |||
|id=chr9:108419307..108419337,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,1.07e-07,6;CL:0002489,1.07e-07,6;CL:0000898,1.07e-07,6;CL:0000809,1.07e-07,6;CL:0000810,1.07e-07,6;CL:0000895,1.07e-07,6;CL:0000808,1.07e-07,6;CL:0000894,1.07e-07,6;CL:0000806,1.07e-07,6;CL:0000807,1.07e-07,6;CL:0000805,1.07e-07,6;CL:0002425,1.07e-07,6;CL:0002436,1.07e-07,6;CL:0002427,1.07e-07,6;CL:0002428,1.07e-07,6;CL:0002429,1.07e-07,6;CL:0002433,1.07e-07,6;CL:0002431,1.07e-07,6;CL:0002432,1.07e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.160148847104794,1.04692622291808,0,0,0,0.33575854382378,0.467225281191051,0.645616617207881,10.13678799492,6.31974221069382,1.88339765048055,1.03703806693937,0.171200729931206,0.34968160967599,0,0.404950534779652,0,0,0.137114433605739,0.42438965179803,0.0850432901510698,1.19149141441062,0.522399578277871,0,0.22940928106717,0.57423196411502,0,0.646413698057667,0,0,0,0,0.61506478758457,0,0.288851619751275,0.166234645358492,0.408338712524738,0.418531630736908,0,0,0.588231488031014,0,0.485510353031154,0.881277725829041,0.709638518536602,1.46837401729345,0,0,0,0.194429899074283,0.279972843250725,0,0.167782606057736,0.725362142011344,0.672187598284928,1.02903774414379,0.286533439938757,0,0.809265843438391,0.528990979272033,0,0.338844532069132,0.889294796111139,0,0.988866362566974,0,0,0.384218305321555,0.829516898467821,0.810035629990144,0.420649922702764,0,0.220868540951614,0.367472397644862,0.383381884072945,0.919218786610021,0,0.255374676170375,0.307213066512487,0.131886287730194,0.274462930807229,0.52091337055676,0,1.12552522006336,0.45839474333043,0,0.142371680799103,0.186399445825301,0.302904773332736,0.151143120213571,0,1.72084775396277,1.3599426674155,0.539703191637817,0.649776417447669,0,0.140444420131752,1.1930122580464,0.259786004602869,0,0.281686839553361,0,2.54805239706646,0,0.865964164044856,0.506719730950197,0.505524445014783,0.22836775943812,0.517875767294343,0.445326417194474,0.867426633830679,1.21786191324856,0.691846491768175,0.150722640552623,0.117588707135705,0,0,0.433798070759735,0.884610551949874,0,0.220841518460394,0,0,0,0,0.255457055208591,0.718890747035522,0.599902730993408,0.508280908292259,0,0.915001205637253,0.502617408451458,0.521472960576829,0.255715457330331,0,0,0.407357455401265,0.248813941220186,0.252722758433675,0.210441855886474,1.43132487258974,1.14951052216736,0.360124259610698,0.150704817835715,0,0.384341160854549,0.468508622798644,0,0.646703978798527,0.945530400839096,0.879755620819744,0.657587197282725,0.556094498451196,0.696504333044333,0.411564272815887,0.59710280045548,1.40442637462647,0.257347907114715,0.284163499395593,0.621377317606506,0.234526059981096,0,0.946978942340841,0.196764231747404,0,0.465067889500816,0.536546802799238,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0,0,0.420579897128254,0.617427674275707,0,0,0.426576501070468,0.696710015581316,0.644337306610467,0.403367049246685,0.22237804384487,0,0.474529061544512,0,0,0,0,0,0,0,0.758671603812327,0.571242563048644,1.1270773567308,0.203651327845314,0.581857461502877,0.280543279561274,0.189709611372772,0.295220295959204,0.156998727841375,0,0.592905254174298,0.333690211432188,0.393117990226406,0.674586337154561,0.405720242777006,0.482354319504834,1.2731292589071,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0.947457058852424,1.30371981153621,0.509235257325564,0.469380496577004,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0.318909537314974,0.163863314715738,0,0.144649058581512,0,1.08781136763742,0,0,0.321101179975584,0,0.655739781506702,0.252470927204373,0.315508219416257,0.780877488593277,0.861693590931196,1.91175038362042,1.33679204449436,0.566153061577665,0.809621403349789,0.584511715822624,1.58115111178609,0,0.709700426041343,0,0,0.164970122972535,0,0.728341908464944,0.906970670894253,0.188605079755898,0.885905678642318,0,0.516856586336442,0,0,0,0,0,0,1.26042765821917,0.776152102696527,0.857348140126369,1.06404140185364,0.891844088010353,0,0.608929898229199,0.23467170806371,0.21183207086382,0,0,0.161464426695906,0.482503399425247,0.238744688006273,0.328281799490123,0,0,0.683483523191411,0.619160603889667,0.185194527369712,0.376736914009382,0.27338845544205,0.228778173206523,0,0,0.138199973804424,0,1.26534397432454,0.813277868507395,0.756037385752609,0.209088296014469,0.218362563746178,0.134864346384821,0,0,0,0,0,1.79419855252775,1.65458490457098,0.777804753376191,0.774958940866387,0.844780627453891,0.821500670520278,1.69265700297135,1.67774951081137,0.241584120826006,0.288030006257865,0.948033361884535,0.810900861160657,1.02710957164827,0.51968329191118,0.358053391334963,0.79472541912506,0.480781798079875,0.147689527174577,0.504832249740738,0.228620419965,0.504130925684203,0.584747284438515,0.288635524920988,0,0.226730383615211,1.10992976687032,0.0897138566094757,0.503653849092235,0.386379188064381,0.187682475451182,0.183151624267265,0.428736758158132,0,0,0.460325236507177,1.14579102687879,0.343706364687375,0,0,0.675022500231806,0,0,0,0.518936737920883,1.19707462020309,0.170733605754134,0.729320151204882,0.209613162627982,0.919217542250071,0.888986911206461,0.206035057238894,0.64183841918363,0.758091635291392,0.760437899670719,0.377252682772152,0.187283014939765,0.320125762024346,0.402048282689293,0.952587382566147,0.347652977834566,0.38581844092741,0,0.294397840268795,0.342869252385415,0.532427418478012,0,0.436039249896986,0.282328141245992,0.25384382367503,0.182927972872773,0.526139422875686,0.271608227691724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| |phase1_expression=0.160148847104794,1.04692622291808,0,0,0,0.33575854382378,0.467225281191051,0.645616617207881,10.13678799492,6.31974221069382,1.88339765048055,1.03703806693937,0.171200729931206,0.34968160967599,0,0.404950534779652,0,0,0.137114433605739,0.42438965179803,0.0850432901510698,1.19149141441062,0.522399578277871,0,0.22940928106717,0.57423196411502,0,0.646413698057667,0,0,0,0,0.61506478758457,0,0.288851619751275,0.166234645358492,0.408338712524738,0.418531630736908,0,0,0.588231488031014,0,0.485510353031154,0.881277725829041,0.709638518536602,1.46837401729345,0,0,0,0.194429899074283,0.279972843250725,0,0.167782606057736,0.725362142011344,0.672187598284928,1.02903774414379,0.286533439938757,0,0.809265843438391,0.528990979272033,0,0.338844532069132,0.889294796111139,0,0.988866362566974,0,0,0.384218305321555,0.829516898467821,0.810035629990144,0.420649922702764,0,0.220868540951614,0.367472397644862,0.383381884072945,0.919218786610021,0,0.255374676170375,0.307213066512487,0.131886287730194,0.274462930807229,0.52091337055676,0,1.12552522006336,0.45839474333043,0,0.142371680799103,0.186399445825301,0.302904773332736,0.151143120213571,0,1.72084775396277,1.3599426674155,0.539703191637817,0.649776417447669,0,0.140444420131752,1.1930122580464,0.259786004602869,0,0.281686839553361,0,2.54805239706646,0,0.865964164044856,0.506719730950197,0.505524445014783,0.22836775943812,0.517875767294343,0.445326417194474,0.867426633830679,1.21786191324856,0.691846491768175,0.150722640552623,0.117588707135705,0,0,0.433798070759735,0.884610551949874,0,0.220841518460394,0,0,0,0,0.255457055208591,0.718890747035522,0.599902730993408,0.508280908292259,0,0.915001205637253,0.502617408451458,0.521472960576829,0.255715457330331,0,0,0.407357455401265,0.248813941220186,0.252722758433675,0.210441855886474,1.43132487258974,1.14951052216736,0.360124259610698,0.150704817835715,0,0.384341160854549,0.468508622798644,0,0.646703978798527,0.945530400839096,0.879755620819744,0.657587197282725,0.556094498451196,0.696504333044333,0.411564272815887,0.59710280045548,1.40442637462647,0.257347907114715,0.284163499395593,0.621377317606506,0.234526059981096,0,0.946978942340841,0.196764231747404,0,0.465067889500816,0.536546802799238,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0,0,0.420579897128254,0.617427674275707,0,0,0.426576501070468,0.696710015581316,0.644337306610467,0.403367049246685,0.22237804384487,0,0.474529061544512,0,0,0,0,0,0,0,0.758671603812327,0.571242563048644,1.1270773567308,0.203651327845314,0.581857461502877,0.280543279561274,0.189709611372772,0.295220295959204,0.156998727841375,0,0.592905254174298,0.333690211432188,0.393117990226406,0.674586337154561,0.405720242777006,0.482354319504834,1.2731292589071,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0.947457058852424,1.30371981153621,0.509235257325564,0.469380496577004,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0.318909537314974,0.163863314715738,0,0.144649058581512,0,1.08781136763742,0,0,0.321101179975584,0,0.655739781506702,0.252470927204373,0.315508219416257,0.780877488593277,0.861693590931196,1.91175038362042,1.33679204449436,0.566153061577665,0.809621403349789,0.584511715822624,1.58115111178609,0,0.709700426041343,0,0,0.164970122972535,0,0.728341908464944,0.906970670894253,0.188605079755898,0.885905678642318,0,0.516856586336442,0,0,0,0,0,0,1.26042765821917,0.776152102696527,0.857348140126369,1.06404140185364,0.891844088010353,0,0.608929898229199,0.23467170806371,0.21183207086382,0,0,0.161464426695906,0.482503399425247,0.238744688006273,0.328281799490123,0,0,0.683483523191411,0.619160603889667,0.185194527369712,0.376736914009382,0.27338845544205,0.228778173206523,0,0,0.138199973804424,0,1.26534397432454,0.813277868507395,0.756037385752609,0.209088296014469,0.218362563746178,0.134864346384821,0,0,0,0,0,1.79419855252775,1.65458490457098,0.777804753376191,0.774958940866387,0.844780627453891,0.821500670520278,1.69265700297135,1.67774951081137,0.241584120826006,0.288030006257865,0.948033361884535,0.810900861160657,1.02710957164827,0.51968329191118,0.358053391334963,0.79472541912506,0.480781798079875,0.147689527174577,0.504832249740738,0.228620419965,0.504130925684203,0.584747284438515,0.288635524920988,0,0.226730383615211,1.10992976687032,0.0897138566094757,0.503653849092235,0.386379188064381,0.187682475451182,0.183151624267265,0.428736758158132,0,0,0.460325236507177,1.14579102687879,0.343706364687375,0,0,0.675022500231806,0,0,0,0.518936737920883,1.19707462020309,0.170733605754134,0.729320151204882,0.209613162627982,0.919217542250071,0.888986911206461,0.206035057238894,0.64183841918363,0.758091635291392,0.760437899670719,0.377252682772152,0.187283014939765,0.320125762024346,0.402048282689293,0.952587382566147,0.347652977834566,0.38581844092741,0,0.294397840268795,0.342869252385415,0.532427418478012,0,0.436039249896986,0.282328141245992,0.25384382367503,0.182927972872773,0.526139422875686,0.271608227691724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| ||
|short_description=p9@Qrich1 | |||
}} | }} |
Latest revision as of 04:22, 26 September 2015
Short description: | p9@Qrich1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Qrich1_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | -80bp_to_ENSMUST00000006851, ENSMUST00000112155, NM_001114119, NM_175143, uc009rqb.2, uc009rqc.2, uc009rqd.2, uc009rqe.2_5end |
EntrezGene: | Qrich1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymocyte | 1.07e-07 | 6 |
double negative thymocyte | 1.07e-07 | 6 |
naive T cell | 1.07e-07 | 6 |
double-positive, alpha-beta thymocyte | 1.07e-07 | 6 |
CD4-positive, alpha-beta thymocyte | 1.07e-07 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.07e-07 | 6 |
DN4 thymocyte | 1.07e-07 | 6 |
DN1 thymic pro-T cell | 1.07e-07 | 6 |
DN2 thymocyte | 1.07e-07 | 6 |
DN3 thymocyte | 1.07e-07 | 6 |
immature single positive thymocyte | 1.07e-07 | 6 |
early T lineage precursor | 1.07e-07 | 6 |
mature CD4 single-positive thymocyte | 1.07e-07 | 6 |
resting double-positive thymocyte | 1.07e-07 | 6 |
double-positive blast | 1.07e-07 | 6 |
CD69-positive double-positive thymocyte | 1.07e-07 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 1.07e-07 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.07e-07 | 6 |
CD24-positive, CD4 single-positive thymocyte | 1.07e-07 | 6 |