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FFCP PHASE1:Mm9::chr10:62706636..62706712,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=67345
|EntrezGene=67345
|HGNC=
|HGNC=
|MCL_coexpression_id=317
|TSSclassifier=NA
|UniProt=Q6PAV2
|UniProt=Q6PAV2
|association_with_transcript=0bp_to_ENSMUST00000020258,ENSMUST00000092452_5end
|association_with_transcript=0bp_to_ENSMUST00000020258,ENSMUST00000092452_5end
|cluster_id=chr10:62706636..62706712,+
|description=CAGE_peak_1_at_Herc4_5end
|description=CAGE_peak_1_at_Herc4_5end
|id=chr10:62706636..62706712,+
|id=chr10:62706636..62706712,+
|ontology_enrichment_celltype=CL:0000414!3.62e-07!11;CL:0000063!9.04e-07!66
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.62e-15,118;UBERON:0000925,3.62e-15,118;UBERON:0006595,3.62e-15,118;UBERON:0001007,1.57e-14,116;UBERON:0001555,1.57e-14,116;UBERON:0007026,1.57e-14,116;UBERON:0004921,6.00e-14,114;UBERON:0005911,4.89e-12,69;UBERON:0000490,7.33e-12,66;UBERON:0003929,1.53e-11,55;UBERON:0001041,6.86e-11,80;UBERON:0005256,8.60e-10,45;UBERON:0009854,3.67e-08,23;UBERON:0009856,3.67e-08,23;UBERON:0002368,6.85e-08,60;UBERON:0002530,1.00e-07,65;UBERON:0002107,1.12e-07,22;UBERON:0007499,1.12e-07,22;UBERON:0006925,1.12e-07,22;UBERON:0009497,1.12e-07,22;UBERON:0000015,1.12e-07,22;UBERON:0002423,1.12e-07,22;UBERON:0006235,1.12e-07,22;UBERON:0008835,1.12e-07,22;UBERON:0003894,1.12e-07,22;UBERON:0004161,1.12e-07,22;UBERON:0008836,1.12e-07,22;UBERON:0009569,2.84e-07,66;UBERON:0004923,3.84e-07,24;UBERON:0005172,3.87e-07,49;UBERON:0005173,3.87e-07,49;UBERON:0002417,3.87e-07,49;UBERON:0000916,3.87e-07,49;UBERON:0003104,4.03e-07,61;UBERON:0009142,4.03e-07,61;UBERON:0000077,7.84e-07,35
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94,17.485474172909,21.169046801073,22.1633593775337,23.8015194483334,23.1966675781892,27.4409473008115,29.8401773861794,44.3283208657932,18.0188400795208,8.45539408026285,18.3905351634094,11.0857188606255,17.1117045742762,18.3406949338378,21.1195156863473,26.0533069793574,30.0772128989525,31.4578033277133,20.0514820285585,13.2493802878618,34.7612232690996,12.9744137785705,13.4551353885924,16.7597861641356,18.976829740753,21.2589049615953,23.7986990049538,24.0733929294561,27.0590085861036,25.6054870360799,24.8032415436628,28.0678696530487,29.3446117003005,35.8812089697417,37.4105132965099,17.314904363177,22.8770334354163,26.0221155364322,30.5239558570861,16.516057839704,23.6265595304772,34.5133090317296,22.5707446815914,20.3310663342144,12.4287813856938,16.0410743763031,18.0445841460872,24.6629707117431,22.661816921691,24.300810008345,17.5625269257446,19.0319811773366,21.7459330935764,11.6241829294278,15.1629451892392,11.7806187970353,13.3708694387562,15.5113740344707,15.8105417267012,20.0022055021454,20.1914356094116,21.8225062522434,20.9738685763952,18.2505095920973,20.3716448696962,19.4774335537355,19.2075457214608,19.7003658517754,17.6228665774737,20.04798838846,19.8696497077616,19.3680373377554,20.1662520584124,24.0008476669791,21.6520483514392,19.7902037656276,19.1857269954674,22.9626888213407,20.3075058940024,23.0489245819693,23.9393437408437,21.3212458738003,24.1291176812828,24.2015436973315,21.9664995697507,20.4615521584845,24.1701472250107,19.2906610981141,10.2422336954558,18.0127338502964,20.19787908054,20.6591398634351,20.5150019781149,20.4043695345971
|phase1_expression=22.5809874417759,70.8420077507903,59.1499011206397,81.3628728415373,86.6549612807181,28.7073554969332,28.9679674338452,95.1638893764417,39.1392647581634,44.9403890538227,21.0598100917371,19.7037232718481,73.6163138704185,68.01307308198,47.3015861778241,50.4163415800667,30.7807226376385,67.0357101386255,83.9140333667121,98.034009565345,16.2432684188543,19.06386263057,24.0303806007821,26.8787270292923,34.8702107222098,52.8293406985819,28.861053742658,29.7350301106527,31.3538642103017,34.7801579068704,27.2728528106025,12.065582795733,10.4561013889377,15.8481681015439,18.7753552838328,15.9585259544153,23.0711372576477,133.93012183581,94.5415766873799,101.040082586943,167.057742600808,145.488688296149,129.631264259318,18.1291417884831,21.6946632809761,26.6142790634438,7.82391344348039,4.57852828398938,2.63623419281366,6.22175677037707,4.75953833526233,4.31257693094915,68.7908684836719,60.9304199289529,65.5382908327805,15.4355661621568,21.203474555468,14.4388185837684,5.05791152148994,1.5869729378161,1.90149421051854,6.43804610931351,8.00365316500025,10.3488467487361,2.96659908770092,9.9467216092454,2.39680088414724,3.07374644257244,5.39185984004084,3.64516033495565,3.78584930432488,3.71346279724945,4.41737081903227,4.28717797252339,2.30029130443767,6.43453150627015,5.50579404996943,8.17198963745201,8.44835932909339,3.16527090552465,3.65950574409639,2.6045668527838,8.37548997004143,11.8180148106653,11.4598685832608,10.0173719061047,7.83044244395066,4.84638559145781,17.8713816266314,24.5607570347053,84.0607017234866,82.6006921902131,40.1183086887573,46.4144744808523,55.8807719004995,67.2040330646003,19.9431076587088,22.8376632254597,21.0426663728324,22.6137327686618,23.0983208433756,32.0816193535795,73.8935195149272,42.6640021891999,20.5666488960653,19.7620695070577,17.1878311305026,27.1757633731363,63.4397814935571,56.7048971227631,20.2977832316379,32.8822716577113,40.1270965225542,48.3819676173918,52.2093859682529,46.6223053833096,33.1241256764061,21.8345028949067,41.5766959416441,20.2208562434261,23.6300424752621,22.7891368973554,50.325775528893,12.8823550685081,11.7290155815535,31.6766748458653,24.2026551501959,27.5955256256968,27.447169047782,11.9832511523858,13.7250180845588,6.53402630986895,18.251553620189,17.6443665557928,10.5971902725376,14.7639549391659,15.8869407606493,29.2356380933719,13.3943061969848,22.0963948680798,18.0867415718158,21.6107978167465,19.2666478891724,25.4691142142358,26.3301251715639,21.3949912875699,20.4269759540209,24.8355235909455,10.5628316537093,13.9938499324186,13.724187684788,13.1517439456545,21.9657326888222,21.2433821578522,25.1054206417691,20.8985980159418,23.87524836865,28.8229655968481,24.7222244474166,15.7415587126981,11.0227248191115,13.6847166710371,13.9679393995274,18.6926020160034,18.8205877722601,21.8581908065383,20.9253253091703,25.3380792936758,22.2155797383199,22.9834449710733,23.1856795301147,28.8013975227905,21.9550115291051,27.5123158458762,10.7247873767705,9.67303356365274,66.7445941627272,27.2384083663451,13.4371597837197,16.953277045812,15.8506977426175,17.3447831176075,18.902133726814,17.3105319762429,28.4717436926707,13.6700132420929,25.1335208800269,19.4977342600328,17.3518037536017,20.6728463990471,26.8011181844621,37.2394180985667,6.2590407314517,16.4517858158009,16.9061603509621,15.8848035719345,18.6194387680921,18.5859922709344,20.6783476396321,19.6321496812871,18.3688511574409,22.3348866698459,37.0565783858936,19.8545675802152,21.0318124771127,20.9121764517914,30.4290182082754,27.2530190520231,28.0088436959562,30.4957905697859,40.6959419205339,25.8087728396797,64.6956929373095,37.2140947668503,32.1398803307997,34.6033062787543,41.9789947641274,49.2092391790635,34.9183529414883,17.0542270593436,14.5038829033403,15.7862929770925,21.1221223459652,21.6083072099942,21.1858840388552,31.8067846008212,25.3792582010968,25.0255099303116,29.1802226643201,35.0667493491679,34.3643113913132,33.2692834737477,40.7136466636035,21.2123216689297,13.769399644533,28.1455481230827,11.2385412991454,12.1900154055891,14.7541450839008,16.1581393410799,15.7754109708128,12.4940398174924,16.5876016254255,18.8785350382516,19.8290819933331,20.6645867475848,10.9298889452221,13.7360253218317,18.1832377855401,9.63963949265421,27.5363765304041,8.72521457969551,18.5691133663077,25.570369060743,10.619611067197,14.3240575331439,13.302236506449,12.0707251043775,9.15435867930396,15.0643222492524,25.5844010236539,17.0860852854428,19.6073558111597,20.2263525078922,16.8669773719998,14.4389760547462,16.6815406819356,18.006109403131,10.0899773350549,15.4322665222746,15.4286003268778,12.1290795969408,17.1130981426206,7.91608867697958,29.5686352160275,31.9866427004368,33.5203165043542,42.0459945000774,36.3294960065787,27.864571316808,30.0818306887904,35.9468570441684,19.8206968908299,10.3838169125885,39.3003025835061,25.1791978915131,28.7051517423053,35.2249014598772,38.000995306445,35.460616847011,25.836721359066,23.2319410857272,25.1523952324051,17.184071124272,13.7606157207794,17.485474172909,21.169046801073,22.1633593775337,23.8015194483334,23.1966675781892,27.4409473008115,29.8401773861794,44.3283208657932,18.0188400795208,8.45539408026285,18.3905351634094,11.0857188606255,17.1117045742762,18.3406949338378,21.1195156863473,26.0533069793574,30.0772128989525,31.4578033277133,20.0514820285585,13.2493802878618,34.7612232690996,12.9744137785705,13.4551353885924,16.7597861641356,18.976829740753,21.2589049615953,23.7986990049538,24.0733929294561,27.0590085861036,25.6054870360799,24.8032415436628,28.0678696530487,29.3446117003005,35.8812089697417,37.4105132965099,17.314904363177,22.8770334354163,26.0221155364322,30.5239558570861,16.516057839704,23.6265595304772,34.5133090317296,22.5707446815914,20.3310663342144,12.4287813856938,16.0410743763031,18.0445841460872,24.6629707117431,22.661816921691,24.300810008345,17.5625269257446,19.0319811773366,21.7459330935764,11.6241829294278,15.1629451892392,11.7806187970353,13.3708694387562,15.5113740344707,15.8105417267012,20.0022055021454,20.1914356094116,21.8225062522434,20.9738685763952,18.2505095920973,20.3716448696962,19.4774335537355,19.2075457214608,19.7003658517754,17.6228665774737,20.04798838846,19.8696497077616,19.3680373377554,20.1662520584124,24.0008476669791,21.6520483514392,19.7902037656276,19.1857269954674,22.9626888213407,20.3075058940024,23.0489245819693,23.9393437408437,21.3212458738003,24.1291176812828,24.2015436973315,21.9664995697507,20.4615521584845,24.1701472250107,19.2906610981141,10.2422336954558,18.0127338502964,20.19787908054,20.6591398634351,20.5150019781149,20.4043695345971
|short_description=p1@Herc4
|short_description=p1@Herc4
}}
}}

Latest revision as of 04:53, 26 September 2015

Short description:p1@Herc4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Herc4_5end
Coexpression cluster:MCL_coexpression_mm9:317
Association with transcript: 0bp_to_ENSMUST00000020258, ENSMUST00000092452_5end
EntrezGene:Herc4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Herc4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G722.58
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I570.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I659.15
CD326+ enterocyte, pool1.CNhs13542.11848-124I381.36
CD326+ enterocyte, pool2.CNhs13197.11849-124I486.65
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I728.71
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I828.97
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E995.16
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E739.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F244.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E621.06
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F119.70
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E473.62
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E868.01
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A147.30
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A350.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A530.78
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A267.04
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A483.91
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A698.03
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A316.24
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H219.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I924.03
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D126.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D234.87
GP2+ M cell, pool1.CNhs13228.11845-124H952.83
GP2+ M cell, pool2.CNhs13231.11846-124I128.86
GP2+ M cell, pool3.CNhs13240.11847-124I229.74
Ileum epithelium, pool1.CNhs13199.10252-104B931.35
Ileum epithelium, pool2.CNhs13232.10253-104C134.78
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C827.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I312.07
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G610.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F518.78
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F615.96
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F723.07
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8133.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H194.54
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3101.04
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9167.06
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2145.49
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4129.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D818.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D921.69
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B326.61
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.82
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.58
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.22
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.76
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A268.79
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I960.93
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A165.54
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C115.44
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E121.20
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C514.44
Mouse Granule cells, donor1.CNhs12131.11713-123C35.06
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.44
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C710.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D29.95
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.39
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.65
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.79
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.29
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.30
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.17
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.66
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.38
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.02
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.85
Mouse Schwann, donor1.CNhs12507.11728-123D917.87
Mouse Schwann, donor2.CNhs12573.11746-123F924.56
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G384.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F782.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C440.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C846.41
Mouse hepatocyte, donor6.CNhs13090.11822-124F455.88
Mouse hepatocyte, donor8.CNhs13091.11824-124F667.20
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A719.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I722.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E321.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I822.61
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G623.10
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H132.08
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I873.89
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B642.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G120.57
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G219.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G317.19
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B627.18
accessory axillary lymph node, adult.CNhs10475.1063-29H963.44
adrenal gland, adult.CNhs10508.49-24D756.70
adrenal gland, embryo E14.CNhs11038.406-44C520.30
adrenal gland, embryo E16.CNhs11004.1254-43D632.88
adrenal gland, embryo E17.CNhs11043.1263-45I140.13
adrenal gland, embryo E18.CNhs11026.1262-18F548.38
adrenal gland, neonate N00.CNhs11191.1311-23C152.21
adrenal gland, neonate N25.CNhs11223.1377-27I346.62
amnion, adult pregnant day17.5.CNhs10488.583-22A833.12
aorta, adult.CNhs10498.46-23H121.83
bone (os femoris), adult.CNhs10483.56-12G241.58
bone (os femoris), neonate N02.CNhs11227.1985-43F520.22
bone (os femoris), neonate N16.CNhs11225.1525-43A623.63
bone (os femoris), neonate N20.CNhs11195.1350-25C322.79
cecum, adult.CNhs10467.37-13H450.33
cerebellum, adult.CNhs10494.15-8B212.88
cerebellum, neonate N30.CNhs11135.1395-42I211.73
colon, adult.CNhs10468.36-18H731.68
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C724.20
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D127.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D427.45
corpora quadrigemina, adult.CNhs10501.16-22A411.98
corpus striatum, adult.CNhs10487.19-21D813.73
corpus striatum, neonate N00.CNhs11226.630-43F16.53
cortex, adult.CNhs10473.12-14D518.25
cortex, neonate N30.CNhs11107.1392-42F217.64
diencephalon, adult.CNhs10482.20-12F210.60
diencephalon, neonate N30.CNhs11201.1388-42B214.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B115.89
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A229.24
epididymis, adult.CNhs10490.58-23B213.39
eyeball, adult.CNhs10484.31-12G422.10
eyeball, embryo E12.CNhs11016.345-16C618.09
eyeball, embryo E14.CNhs10521.399-16E221.61
eyeball, embryo E15.CNhs10593.426-16C919.27
eyeball, embryo E17.CNhs11023.1261-18D425.47
eyeball, neonate N00.CNhs11207.633-15C626.33
eyeball, neonate N01.CNhs11140.1532-43E721.39
eyeball, neonate N02.CNhs11205.1551-44G820.43
eyeball, neonate N16.CNhs11188.777-19A224.84
forelimb, embryo E11.CNhs10596.335-25E210.56
forelimb, embryo E12.CNhs10600.359-14H213.99
forelimb, embryo E13.CNhs10589.384-1E213.72
forelimb, embryo E14.CNhs10577.413-26A813.15
forelimb, embryo E15.CNhs11007.437-20E721.97
forelimb, embryo E17.CNhs10598.1517-43C421.24
forelimb, embryo E18.CNhs11008.1520-43B525.11
gonad, embryo E13.CNhs11044.1564-45I620.90
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C823.88
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D228.82
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D524.72
heart, embryo E11.CNhs10586.331-24E915.74
heart, embryo E12.CNhs11015.353-12F511.02
heart, embryo E13.CNhs11013.376-3I913.68
heart, embryo E14.CNhs10597.403-26D413.97
heart, embryo E15.CNhs11017.431-16C818.69
heart, embryo E16.CNhs11021.457-17C618.82
heart, embryo E17.CNhs11025.479-18E521.86
heart, embryo E18.CNhs11030.1283-20G320.93
heart, neonate N00.CNhs11213.639-21E325.34
heart, neonate N03.CNhs11221.1349-25I222.22
heart, neonate N10.CNhs11118.749-24G122.98
heart, neonate N16.CNhs11209.782-15G123.19
heart, neonate N20.CNhs11127.821-26I628.80
heart, neonate N25.CNhs11196.1351-25D321.96
heart, neonate N30.CNhs11202.1390-42D227.51
hippocampus, adult.CNhs10478.13-16E810.72
hippocampus, neonate N00.CNhs11228.627-43G19.67
intestinal mucosa, adult.CNhs10506.860-29I366.74
intestine, adult.CNhs10496.178-9A327.24
intestine, embryo E12.CNhs11019.1251-16I513.44
intestine, embryo E13.CNhs11010.381-16D516.95
intestine, embryo E15.CNhs10602.976-16D815.85
intestine, embryo E16.CNhs10585.463-22H417.34
intestine, embryo E17.CNhs10582.482-18D318.90
intestine, embryo E18.CNhs10526.1289-20F717.31
intestine, neonate N00.CNhs11126.644-26D128.47
intestine, neonate N01.CNhs11192.1322-23E913.67
intestine, neonate N06.CNhs11102.688-20B825.13
intestine, neonate N07.CNhs11095.720-20F219.50
intestine, neonate N10.CNhs11098.755-23A517.35
intestine, neonate N20.CNhs11187.827-18D120.67
intestine, neonate N25.CNhs11121.1352-25E326.80
intestine, neonate N30.CNhs11131.1384-42G137.24
kidney, embryo E14.CNhs10606.411-4I96.26
kidney, embryo E15.CNhs10997.434-16F816.45
kidney, embryo E16.CNhs10584.464-22A516.91
kidney, embryo E17.CNhs11028.483-18I215.88
kidney, embryo E18.CNhs11001.1288-20C718.62
kidney, neonate N00.CNhs11214.646-21G718.59
kidney, neonate N10.CNhs11206.758-6D520.68
kidney, neonate N20.CNhs11113.832-19I119.63
kidney, neonate N25.CNhs11122.1353-25F318.37
kidney, neonate N30.CNhs11203.1385-42H122.33
liver, adult pregnant day01.CNhs10466.508-5B237.06
liver, embryo E12.CNhs10601.355-15F819.85
liver, embryo E13.CNhs10524.378-3H621.03
liver, embryo E14.CNhs10594.409-16E120.91
liver, embryo E15.CNhs10520.433-16D730.43
liver, embryo E16.CNhs10523.462-17F527.25
liver, embryo E17.CNhs10510.481-18A328.01
liver, embryo E18.CNhs10579.499-43G430.50
liver, neonate N00.CNhs11117.641-24F440.70
liver, neonate N03.CNhs11123.1345-25G225.81
liver, neonate N06.CNhs11101.684-20A864.70
liver, neonate N07.CNhs11103.716-20H237.21
liver, neonate N10.CNhs11115.751-24B932.14
liver, neonate N20.CNhs11220.823-25A334.60
liver, neonate N25.CNhs11198.1368-26H141.98
liver, neonate N30.CNhs11106.1382-42D149.21
lung, adult.CNhs10474.28-22B134.92
lung, embryo E12.CNhs10522.354-16G217.05
lung, embryo E14.CNhs10604.404-26F814.50
lung, embryo E15.CNhs11020.432-17C515.79
lung, embryo E16.CNhs10998.458-17B621.12
lung, embryo E17.CNhs10605.480-44A621.61
lung, embryo E18.CNhs10583.1287-20I621.19
lung, neonate N00.CNhs11224.640-42C631.81
lung, neonate N06.CNhs11212.683-20E525.38
lung, neonate N07.CNhs11111.715-19A325.03
lung, neonate N10.CNhs11219.750-23E629.18
lung, neonate N20.CNhs11109.822-18A435.07
lung, neonate N25.CNhs11119.1359-25C734.36
lung, neonate N30.CNhs11133.1394-42H233.27
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A140.71
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A121.21
mammary gland, adult lactating day02.CNhs10480.595-22B613.77
mammary gland, adult pregnant day19.CNhs10476.588-5H228.15
medulla oblongata, adult.CNhs10477.17-12C211.24
medulla oblongata, neonate N30.CNhs11200.1396-42A312.19
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C714.75
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C216.16
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E115.78
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E212.49
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E316.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D718.88
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D819.83
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D920.66
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D410.93
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D513.74
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D618.18
olfactory brain, adult.CNhs10489.18-22I99.64
ovary, adult.CNhs10507.91-2I727.54
ovary, embryo E18.CNhs11040.505-44H78.73
ovary, neonate N00.CNhs11217.1299-22I418.57
oviduct, adult pregnant day01.CNhs10500.988-6G625.57
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F414.32
pancreas, embryo E15.CNhs11042.1556-45F213.30
pancreas, embryo E16.CNhs11003.460-26E512.07
pancreas, embryo E17.CNhs10599.1558-45G39.15
pancreas, embryo E18.CNhs10580.1535-43I715.06
pancreas, neonate N00.CNhs11105.645-26G925.58
pancreas, neonate N01.CNhs11138.1531-43D717.09
pancreas, neonate N02.CNhs11139.1539-43D819.61
pancreas, neonate N16.CNhs11136.787-43B620.23
pancreas, neonate N25.CNhs11094.1555-45E216.87
pancreas, neonate N30.CNhs11182.1548-44H514.44
pituitary gland, adult.CNhs10493.21-1G816.68
pituitary gland, embryo E12.CNhs11018.346-16E618.01
pituitary gland, embryo E13.CNhs11009.370-44C710.09
pituitary gland, embryo E14.CNhs11037.398-44A515.43
pituitary gland, embryo E15.CNhs10592.427-16B915.43
pituitary gland, embryo E16.CNhs11036.449-43F612.13
pituitary gland, embryo E17.CNhs11039.1265-44F517.11
pituitary gland, neonate N00.CNhs11190.1308-22E97.92
placenta, adult pregnant day10.CNhs10472.539-13I729.57
placenta, adult pregnant day17.CNhs10464.577-18G331.99
prostate, adult.CNhs10470.859-1F833.52
skin, adult.CNhs10492.30-1C342.05
skin, neonate N00.CNhs11124.650-25G436.33
skin, neonate N03.CNhs11215.662-22H327.86
skin, neonate N06.CNhs11097.693-20I530.08
skin, neonate N10.CNhs11108.762-6C435.95
small intestine, neonate N16.CNhs11114.790-21I119.82
spinal cord, adult.CNhs10505.24-13C910.38
spleen, adult.CNhs10465.25-2G239.30
spleen, embryo E16.CNhs11035.461-43C125.18
spleen, embryo E18.CNhs11011.1271-21F228.71
spleen, neonate N10.CNhs11116.752-24D135.22
spleen, neonate N20.CNhs11112.824-19H138.00
spleen, neonate N25.CNhs11099.1354-25G335.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C625.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C923.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D325.15
stomach, adult.CNhs10503.33-1H617.18
stomach, embryo E12.CNhs10588.356-43E313.76
stomach, embryo E15.CNhs10603.1252-16G817.49
stomach, embryo E16.CNhs11022.459-17D421.17
stomach, embryo E17.CNhs11006.1035-18D522.16
stomach, embryo E18.CNhs10999.1286-20C623.80
stomach, neonate N03.CNhs11193.1340-24B823.20
stomach, neonate N07.CNhs11210.718-18A927.44
stomach, neonate N25.CNhs11104.1355-25E429.84
stomach, neonate N30.CNhs11134.1386-42I144.33
submandibular gland, adult.CNhs10469.59-29C118.02
testis, adult.CNhs10504.57-7G58.46
testis, embryo E13.CNhs11031.389-23F518.39
testis, embryo E15.CNhs11034.443-27C511.09
testis, embryo E16.CNhs11033.470-26G517.11
testis, embryo E17.CNhs11029.486-18I518.34
testis, embryo E18.CNhs11027.503-18G521.12
testis, neonate N00.CNhs11189.1300-22B726.05
testis, neonate N07.CNhs11222.726-26I430.08
testis, neonate N10.CNhs11204.763-44D931.46
testis, neonate N20.CNhs11110.839-18H320.05
testis, neonate N30.CNhs11130.1391-42E213.25
thymus, adult.CNhs10471.38-12B534.76
thymus, embryo E14.CNhs11041.402-44I412.97
thymus, embryo E15.CNhs11005.430-45I213.46
thymus, embryo E16.CNhs11002.456-26C516.76
thymus, embryo E17.CNhs10581.478-18C118.98
thymus, embryo E18.CNhs10595.1273-19G421.26
thymus, neonate N02.CNhs11181.1541-43F823.80
thymus, neonate N03.CNhs11137.2104-43C724.07
thymus, neonate N06.CNhs11197.681-26C427.06
thymus, neonate N07.CNhs11211.713-19D325.61
thymus, neonate N10.CNhs11194.748-24E424.80
thymus, neonate N20.CNhs11186.820-7A228.07
thymus, neonate N25.CNhs11125.1362-25G729.34
thymus, neonate N30.CNhs11132.1393-42G235.88
tongue, adult.CNhs10499.32-1B437.41
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H317.31
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F722.88
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G526.02
urinary bladder, adult.CNhs10481.879-12E430.52
uterus, adult pregnant day19.CNhs10497.590-15F516.52
uterus, adult.CNhs10509.92-27E523.63
vagina, adult.CNhs10502.89-27D534.51
vesicular gland, adult.CNhs10491.51-27F822.57
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A120.33
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A212.43
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A316.04
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D718.04
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A424.66
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A522.66
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A624.30
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A717.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.03
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A921.75
whole body, embryo E11.CNhs11014.324-5I811.62
whole body, embryo E12.CNhs10587.857-27C915.16
whole body, embryo E13.CNhs10512.372-23H211.78
whole body, embryo E14.5.CNhs10578.420-27D213.37
whole body, embryo E14.CNhs10519.395-14B115.51
whole body, embryo E16.CNhs10514.453-14F215.81
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G520.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G520.19
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G521.82
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G520.97
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G518.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G520.37
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G519.48
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G519.21
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G519.70
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G517.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G520.05
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G519.87
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G519.37
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G520.17
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G524.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G521.65
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G519.79
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G519.19
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G522.96
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G520.31
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G523.05
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G523.94
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G521.32
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G524.13
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G524.20
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G521.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G520.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G524.17
whole body, embryo E17.5.CNhs10513.490-9F919.29
whole body, embryo E17.CNhs10517.475-3I510.24
whole body, embryo E18.CNhs10516.493-3B318.01
whole body, neonate N00.CNhs10525.657-19C220.20
whole body, neonate N01.CNhs10576.659-23C620.66
whole body, neonate N06.CNhs10515.692-21D120.52
whole body, neonate N10.CNhs10518.761-6B420.40





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure3.62e-15118
endoderm3.62e-15118
presumptive endoderm3.62e-15118
digestive system1.57e-14116
digestive tract1.57e-14116
primitive gut1.57e-14116
subdivision of digestive tract6.00e-14114
endo-epithelium4.89e-1269
unilaminar epithelium7.33e-1266
gut epithelium1.53e-1155
foregut6.86e-1180
trunk mesenchyme8.60e-1045
digestive tract diverticulum3.67e-0823
sac3.67e-0823
endocrine gland6.85e-0860
gland1.00e-0765
liver1.12e-0722
epithelial sac1.12e-0722
digestive gland1.12e-0722
epithelium of foregut-midgut junction1.12e-0722
anatomical boundary1.12e-0722
hepatobiliary system1.12e-0722
foregut-midgut junction1.12e-0722
hepatic diverticulum1.12e-0722
liver primordium1.12e-0722
septum transversum1.12e-0722
liver bud1.12e-0722
subdivision of trunk2.84e-0766
organ component layer3.84e-0724
abdomen element3.87e-0749
abdominal segment element3.87e-0749
abdominal segment of trunk3.87e-0749
abdomen3.87e-0749
mesenchyme4.03e-0761
entire embryonic mesenchyme4.03e-0761
mixed endoderm/mesoderm-derived structure7.84e-0735
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