FFCP PHASE1:Mm9::chr2:167328707..167328724,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=81018 | |EntrezGene=81018 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=Q9ET26 | |UniProt=Q9ET26 | ||
|association_with_transcript=118bp_to_ENSMUST00000078050_5end | |association_with_transcript=118bp_to_ENSMUST00000078050_5end | ||
|cluster_id=chr2:167328707..167328724,+ | |||
|description=CAGE_peak_3_at_Rnf114_5end | |description=CAGE_peak_3_at_Rnf114_5end | ||
|id=chr2:167328707..167328724,+ | |id=chr2:167328707..167328724,+ | ||
|ontology_enrichment_celltype=CL:0002563!7.28e-10!9;CL:0002251!7.28e-10!9;CL:0000066!2.36e-09!25;CL:0000223!5.91e-08!20;CL:0000239!1.15e-07!6;CL:0000677!1.15e-07!6;CL:0000212!1.15e-07!6;CL:0000584!1.15e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.36e-14,9;CL:0002251,2.36e-14,9;CL:0000066,9.18e-14,25;CL:0000239,2.40e-13,6;CL:0000677,2.40e-13,6;CL:0000584,2.40e-13,6;CL:0000075,2.59e-11,7;CL:0000223,1.78e-10,20;CL:0002076,5.26e-08,15;CL:0000682,9.37e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.14e-17!59;UBERON:0000160!4.33e-17!43;UBERON:0000344!5.81e-16!15;UBERON:0001242!4.96e-14!13;UBERON:0000060!4.96e-14!13;UBERON:0001262!4.96e-14!13;UBERON:0004786!4.96e-14!13;UBERON:0001007!4.92e-13!128;UBERON:0001555!4.92e-13!128;UBERON:0007026!4.92e-13!128;UBERON:0004119!1.49e-12!130;UBERON:0000925!1.49e-12!130;UBERON:0006595!1.49e-12!130;UBERON:0004921!8.79e-12!126;UBERON:0004185!8.79e-12!126;UBERON:0004923!3.30e-11!24;UBERON:0003350!7.28e-10!9;UBERON:0004808!7.28e-10!9;UBERON:0001277!7.28e-10!9;UBERON:0009854!2.60e-08!23;UBERON:0009856!2.60e-08!23;UBERON:0000485!1.49e-07!11;UBERON:0002107!1.54e-07!22;UBERON:0007499!1.54e-07!22;UBERON:0006925!1.54e-07!22;UBERON:0009497!1.54e-07!22;UBERON:0000015!1.54e-07!22;UBERON:0002423!1.54e-07!22;UBERON:0006235!1.54e-07!22;UBERON:0008835!1.54e-07!22;UBERON:0003894!1.54e-07!22;UBERON:0004161!1.54e-07!22;UBERON:0008836!1.54e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.43e-41,31;UBERON:0005409,2.37e-27,47;UBERON:0000344,5.40e-26,15;UBERON:0001242,2.82e-22,13;UBERON:0001262,2.82e-22,13;UBERON:0004786,2.82e-22,13;UBERON:0001007,1.67e-15,116;UBERON:0001555,1.67e-15,116;UBERON:0007026,1.67e-15,116;UBERON:0004119,4.25e-15,118;UBERON:0000925,4.25e-15,118;UBERON:0006595,4.25e-15,118;UBERON:0004923,6.68e-15,24;UBERON:0003350,2.36e-14,9;UBERON:0004808,2.36e-14,9;UBERON:0001277,2.36e-14,9;UBERON:0004921,1.55e-13,114;UBERON:0000485,1.83e-11,11;UBERON:0002108,2.27e-09,4;UBERON:0000331,1.87e-07,3;UBERON:0002116,1.87e-07,3;UBERON:0001204,1.87e-07,3;UBERON:0001168,1.87e-07,3 | |||
|phase1_expression=0,24.0793031271159,25.479957405814,22.6848158480123,31.0555352566735,1.84667199103079,2.56973904655078,0.129123323441576,0,0,0,0,0,0,0,0.404950534779652,0.699561878128147,0,0,0,0,0.0992909512008853,0,5.27974995218242,8.25873411841812,21.2465826722557,14.6459078694085,16.5912849168135,17.8622014288991,14.3657173963161,7.98229838359097,0,0,0,0.866554859253824,1.82858109894342,1.83752420636132,0,1.5626706890476,0,1.17646297606203,0.683045484958446,1.45653105909346,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0.860423876981386,2.719885334831,0.539703191637817,3.24888208723835,1.34408066129201,0.561777680527007,0,0,0,0,0,0,0,0,0,0,2.39786147410026,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,5.59175283654366,0,0,12.0064815948038,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631325567659422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,18.8338706300765,15.8670339998127,0.213288250535234,0,0,0.605050573870028,1.55664630691409,2.66315876557583,11.8632265386128,3.78807595865225,2.01068167040216,3.58121649674071,3.70431765526328,8.08937467788799,8.64552199498777,8.96135729644652,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0.123397163921801,0.889357881261447,0,0,0,0,0.241177159752417,0,0.287696137450811,0.324270453550071,0.823684239564244,0,1.11642284300551,1.87222603868736,0.757736633841335,1.4351793081753,1.4473305640901,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.91034844541493,0,0.170870880797853,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0,0,0,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,4.79575401179634,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.565879024158229,0.0936415074698824,0.128050304809739,0.287177344778066,0,0.347652977834566,0,0,0,0,0.354951612318675,0.238436189947321,0.145346416632329,0.282328141245992,0.25384382367503,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0,24.0793031271159,25.479957405814,22.6848158480123,31.0555352566735,1.84667199103079,2.56973904655078,0.129123323441576,0,0,0,0,0,0,0,0.404950534779652,0.699561878128147,0,0,0,0,0.0992909512008853,0,5.27974995218242,8.25873411841812,21.2465826722557,14.6459078694085,16.5912849168135,17.8622014288991,14.3657173963161,7.98229838359097,0,0,0,0.866554859253824,1.82858109894342,1.83752420636132,0,1.5626706890476,0,1.17646297606203,0.683045484958446,1.45653105909346,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0.860423876981386,2.719885334831,0.539703191637817,3.24888208723835,1.34408066129201,0.561777680527007,0,0,0,0,0,0,0,0,0,0,2.39786147410026,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,5.59175283654366,0,0,12.0064815948038,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631325567659422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,18.8338706300765,15.8670339998127,0.213288250535234,0,0,0.605050573870028,1.55664630691409,2.66315876557583,11.8632265386128,3.78807595865225,2.01068167040216,3.58121649674071,3.70431765526328,8.08937467788799,8.64552199498777,8.96135729644652,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0.123397163921801,0.889357881261447,0,0,0,0,0.241177159752417,0,0.287696137450811,0.324270453550071,0.823684239564244,0,1.11642284300551,1.87222603868736,0.757736633841335,1.4351793081753,1.4473305640901,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.91034844541493,0,0.170870880797853,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0,0,0,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,4.79575401179634,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.565879024158229,0.0936415074698824,0.128050304809739,0.287177344778066,0,0.347652977834566,0,0,0,0,0.354951612318675,0.238436189947321,0.145346416632329,0.282328141245992,0.25384382367503,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p3@Rnf114 | |short_description=p3@Rnf114 | ||
}} | }} |
Latest revision as of 05:01, 26 September 2015
Short description: | p3@Rnf114 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rnf114_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 118bp_to_ENSMUST00000078050_5end |
EntrezGene: | Rnf114 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.36e-14 | 9 |
epithelial cell of alimentary canal | 2.36e-14 | 9 |
epithelial cell | 9.18e-14 | 25 |
brush border epithelial cell | 2.40e-13 | 6 |
gut absorptive cell | 2.40e-13 | 6 |
enterocyte | 2.40e-13 | 6 |
columnar/cuboidal epithelial cell | 2.59e-11 | 7 |
endodermal cell | 1.78e-10 | 20 |
endo-epithelial cell | 5.26e-08 | 15 |
M cell of gut | 9.37e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.43e-41 | 31 |
gastrointestinal system | 2.37e-27 | 47 |
mucosa | 5.40e-26 | 15 |
intestinal mucosa | 2.82e-22 | 13 |
wall of intestine | 2.82e-22 | 13 |
gastrointestinal system mucosa | 2.82e-22 | 13 |
digestive system | 1.67e-15 | 116 |
digestive tract | 1.67e-15 | 116 |
primitive gut | 1.67e-15 | 116 |
endoderm-derived structure | 4.25e-15 | 118 |
endoderm | 4.25e-15 | 118 |
presumptive endoderm | 4.25e-15 | 118 |
organ component layer | 6.68e-15 | 24 |
epithelium of mucosa | 2.36e-14 | 9 |
gastrointestinal system epithelium | 2.36e-14 | 9 |
intestinal epithelium | 2.36e-14 | 9 |
subdivision of digestive tract | 1.55e-13 | 114 |
simple columnar epithelium | 1.83e-11 | 11 |
small intestine | 2.27e-09 | 4 |
ileal mucosa | 1.87e-07 | 3 |
ileum | 1.87e-07 | 3 |
mucosa of small intestine | 1.87e-07 | 3 |
wall of small intestine | 1.87e-07 | 3 |