FFCP PHASE1:Mm9::chr5:75098916..75098939,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=16924 | |EntrezGene=16924 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=O70263 | |UniProt=O70263 | ||
|association_with_transcript=0bp_to_ENSMUST00000117388,NM_001159577,uc008xtt.2_5end | |||
|cluster_id=chr5:75098916..75098939,- | |||
|description=CAGE_peak_3_at_Lnx1_5end | |||
|id=chr5:75098916..75098939,- | |||
|ontology_enrichment_celltype=CL:0002563!1.55e-07!9;CL:0002251!1.55e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.17e-09,9;CL:0002251,1.17e-09,9;CL:0000066,1.96e-08,25;CL:0000075,7.20e-08,7;CL:0002076,1.33e-07,15;CL:0000239,1.56e-07,6;CL:0000677,1.56e-07,6;CL:0000584,1.56e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.88e-19!43;UBERON:0005409!1.12e-18!59;UBERON:0004119!1.42e-11!130;UBERON:0000925!1.42e-11!130;UBERON:0006595!1.42e-11!130;UBERON:0000344!4.70e-11!15;UBERON:0001007!5.62e-11!128;UBERON:0001555!5.62e-11!128;UBERON:0007026!5.62e-11!128;UBERON:0004921!3.85e-10!126;UBERON:0004185!3.85e-10!126;UBERON:0001242!5.52e-10!13;UBERON:0000060!5.52e-10!13;UBERON:0001262!5.52e-10!13;UBERON:0004786!5.52e-10!13;UBERON:0000485!7.34e-08!11;UBERON:0003350!1.55e-07!9;UBERON:0004808!1.55e-07!9;UBERON:0001277!1.55e-07!9;UBERON:0004923!8.22e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.99e-22,31;UBERON:0005409,9.04e-22,47;UBERON:0000344,2.05e-14,15;UBERON:0001242,5.76e-13,13;UBERON:0001262,5.76e-13,13;UBERON:0004786,5.76e-13,13;UBERON:0000485,4.28e-10,11;UBERON:0004119,5.00e-10,118;UBERON:0000925,5.00e-10,118;UBERON:0006595,5.00e-10,118;UBERON:0001007,9.29e-10,116;UBERON:0001555,9.29e-10,116;UBERON:0007026,9.29e-10,116;UBERON:0003350,1.17e-09,9;UBERON:0004808,1.17e-09,9;UBERON:0001277,1.17e-09,9;UBERON:0004923,2.12e-09,24;UBERON:0004921,7.97e-09,114;UBERON:0007023,2.48e-08,51 | |||
|phase1_expression=1.12104192973356,17.0997949743287,12.739978702907,21.1724947914781,19.5349334679075,7.05092942029937,8.1764424208434,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,4.31979541542198,5.96464130774642,9.18771142584032,7.32295393470427,7.32602191132023,7.79096019771133,6.5527833737582,3.10422714917427,0,0,0,8.95440021228951,3.49092755252834,4.49172583777212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0.0755715601067855,1.73918693221007,0,0,0,0.649776417447669,0,1.68533304158102,0,0,0,1.83096445709685,0,0,0,2.38140145112336,1.77351905832569,1.01104889002957,3.4255163915718,0,0,0,0,0,0,0,0.502666365318702,4.6967043869531,4.62717942143717,0,0,0.441683036920787,0.969750506270444,3.72783522436244,0,0,9.19645398750929,0,0,0,0,0,0,0,0,0,0,0.101839363850316,1.7416975885413,10.108910337347,3.57751155007006,0.260240885925407,0,0,0.60281927134286,0,0,0.0937017245597288,0.776110112217047,0,0.378212160335639,0,0,0.834141747676794,3.48252166522167,4.52720700097476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56748166682099,1.02339991197733,0.439100230582101,1.74468344388483,0,0,13.2167513193519,7.66906643324278,0.213288250535234,0.464473343720877,1.15980715189884,2.42020229548011,2.2237804384487,1.33157938278791,7.59246498471219,3.78807595865225,4.27269854960458,2.78539060857611,4.67913809085888,10.7858329038507,7.5648317456143,6.77080329064848,0,0.114248512609729,0,1.01825663922657,0.775809948670503,0.701358198903186,1.45444035385792,5.46157547524528,4.70996183524124,2.09775178667061,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,2.21703828199926,0.189491411770485,0.814824882210129,2.03694102930226,1.17345124144251,0.167506257441816,1.19021820443007,0.390267295715598,0.472905432318573,0.221464689648775,0.159454768657487,1.47476983244164,0.863424909329478,1.15719246865209,0,0,2.95058563811422,2.48343071674259,0,0,0,2.52470927204373,0,0,0,0,0,0,0,0,0,0,1.13552068166615,0,0.162886959353576,1.31976098378028,0,1.21390318077491,1.209294227859,1.32023555829129,1.18120757152309,0.307435147943927,2.06742634534577,1.45413491791002,1.78248689192361,0.632073515871632,1.05418608574999,3.09406629744561,7.14923172082955,0,1.16422815404479,1.50035924522115,0.886701168211368,1.96205699362278,0.822745103010605,0.913394847343798,0.704015124191131,4.87213762986786,6.3953235435939,5.7710188529518,6.78150592122803,3.79971427047382,6.92359595218192,8.86360858623331,10.2018292820448,0,0,0,0,0,0,0,0,0,0,4.77335309007557,0.316335993581135,1.21991680276109,1.83609079397062,4.39085421630384,4.58561383866973,4.04593039154462,4.71124697634415,5.75863072364865,4.01806417204558,13.0481255748254,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0,0.240390899039938,0.295379054349154,0.201932899896295,0.15241361331,0.201652370273681,0.194915761479505,0.288635524920988,0,10.6563280299149,1.10992976687032,0.448569283047378,0.503653849092235,4.44336066274038,0.375364950902364,2.19781949120718,11.5758924702696,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.729320151204882,0,0.367687016900028,0.44449345560323,1.03017528619447,0.320919209591815,0.505394423527595,1.77435509923168,0.377252682772152,0.842773567228942,0.576226371643824,0.631790158511746,0,0.463537303779422,0.38581844092741,0.412085900803307,0.883193520806384,1.71434626192708,0.887379030796687,0.953744759789284,0.872078499793971,0.564656282491984,0.423073039458382,1.46342378298218,1.31534855718921,0.950628796921032,0,0.355905054372522,0.197008964751127,0.818462086339379,0.929621047115796,1.54325288784913,0.249810577937946,1.40358965067245,1.71896843238639,0.382576664137687,1.32354851471709,0.695603506861264 | |phase1_expression=1.12104192973356,17.0997949743287,12.739978702907,21.1724947914781,19.5349334679075,7.05092942029937,8.1764424208434,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,4.31979541542198,5.96464130774642,9.18771142584032,7.32295393470427,7.32602191132023,7.79096019771133,6.5527833737582,3.10422714917427,0,0,0,8.95440021228951,3.49092755252834,4.49172583777212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0.0755715601067855,1.73918693221007,0,0,0,0.649776417447669,0,1.68533304158102,0,0,0,1.83096445709685,0,0,0,2.38140145112336,1.77351905832569,1.01104889002957,3.4255163915718,0,0,0,0,0,0,0,0.502666365318702,4.6967043869531,4.62717942143717,0,0,0.441683036920787,0.969750506270444,3.72783522436244,0,0,9.19645398750929,0,0,0,0,0,0,0,0,0,0,0.101839363850316,1.7416975885413,10.108910337347,3.57751155007006,0.260240885925407,0,0,0.60281927134286,0,0,0.0937017245597288,0.776110112217047,0,0.378212160335639,0,0,0.834141747676794,3.48252166522167,4.52720700097476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56748166682099,1.02339991197733,0.439100230582101,1.74468344388483,0,0,13.2167513193519,7.66906643324278,0.213288250535234,0.464473343720877,1.15980715189884,2.42020229548011,2.2237804384487,1.33157938278791,7.59246498471219,3.78807595865225,4.27269854960458,2.78539060857611,4.67913809085888,10.7858329038507,7.5648317456143,6.77080329064848,0,0.114248512609729,0,1.01825663922657,0.775809948670503,0.701358198903186,1.45444035385792,5.46157547524528,4.70996183524124,2.09775178667061,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,2.21703828199926,0.189491411770485,0.814824882210129,2.03694102930226,1.17345124144251,0.167506257441816,1.19021820443007,0.390267295715598,0.472905432318573,0.221464689648775,0.159454768657487,1.47476983244164,0.863424909329478,1.15719246865209,0,0,2.95058563811422,2.48343071674259,0,0,0,2.52470927204373,0,0,0,0,0,0,0,0,0,0,1.13552068166615,0,0.162886959353576,1.31976098378028,0,1.21390318077491,1.209294227859,1.32023555829129,1.18120757152309,0.307435147943927,2.06742634534577,1.45413491791002,1.78248689192361,0.632073515871632,1.05418608574999,3.09406629744561,7.14923172082955,0,1.16422815404479,1.50035924522115,0.886701168211368,1.96205699362278,0.822745103010605,0.913394847343798,0.704015124191131,4.87213762986786,6.3953235435939,5.7710188529518,6.78150592122803,3.79971427047382,6.92359595218192,8.86360858623331,10.2018292820448,0,0,0,0,0,0,0,0,0,0,4.77335309007557,0.316335993581135,1.21991680276109,1.83609079397062,4.39085421630384,4.58561383866973,4.04593039154462,4.71124697634415,5.75863072364865,4.01806417204558,13.0481255748254,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0,0.240390899039938,0.295379054349154,0.201932899896295,0.15241361331,0.201652370273681,0.194915761479505,0.288635524920988,0,10.6563280299149,1.10992976687032,0.448569283047378,0.503653849092235,4.44336066274038,0.375364950902364,2.19781949120718,11.5758924702696,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.729320151204882,0,0.367687016900028,0.44449345560323,1.03017528619447,0.320919209591815,0.505394423527595,1.77435509923168,0.377252682772152,0.842773567228942,0.576226371643824,0.631790158511746,0,0.463537303779422,0.38581844092741,0.412085900803307,0.883193520806384,1.71434626192708,0.887379030796687,0.953744759789284,0.872078499793971,0.564656282491984,0.423073039458382,1.46342378298218,1.31534855718921,0.950628796921032,0,0.355905054372522,0.197008964751127,0.818462086339379,0.929621047115796,1.54325288784913,0.249810577937946,1.40358965067245,1.71896843238639,0.382576664137687,1.32354851471709,0.695603506861264 | ||
|short_description=p3@Lnx1 | |||
}} | }} |
Latest revision as of 05:21, 26 September 2015
Short description: | p3@Lnx1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Lnx1_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 0bp_to_ENSMUST00000117388, NM_001159577, uc008xtt.2_5end |
EntrezGene: | Lnx1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.17e-09 | 9 |
epithelial cell of alimentary canal | 1.17e-09 | 9 |
epithelial cell | 1.96e-08 | 25 |
columnar/cuboidal epithelial cell | 7.20e-08 | 7 |
endo-epithelial cell | 1.33e-07 | 15 |
brush border epithelial cell | 1.56e-07 | 6 |
gut absorptive cell | 1.56e-07 | 6 |
enterocyte | 1.56e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.99e-22 | 31 |
gastrointestinal system | 9.04e-22 | 47 |
mucosa | 2.05e-14 | 15 |
intestinal mucosa | 5.76e-13 | 13 |
wall of intestine | 5.76e-13 | 13 |
gastrointestinal system mucosa | 5.76e-13 | 13 |
simple columnar epithelium | 4.28e-10 | 11 |
endoderm-derived structure | 5.00e-10 | 118 |
endoderm | 5.00e-10 | 118 |
presumptive endoderm | 5.00e-10 | 118 |
digestive system | 9.29e-10 | 116 |
digestive tract | 9.29e-10 | 116 |
primitive gut | 9.29e-10 | 116 |
epithelium of mucosa | 1.17e-09 | 9 |
gastrointestinal system epithelium | 1.17e-09 | 9 |
intestinal epithelium | 1.17e-09 | 9 |
organ component layer | 2.12e-09 | 24 |
subdivision of digestive tract | 7.97e-09 | 114 |
adult organism | 2.48e-08 | 51 |