FFCP PHASE1:Mm9::chr4:116828680..116828690,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr4:116828680..116828690,- to FFCP PHASE1:Mm9::chr4:116828680..116828690,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=100040298,100043763,100502877,20116 | |EntrezGene=100040298,100043763,100502877,20116 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=155 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000140226_5end | |||
|cluster_id=chr4:116828680..116828690,- | |||
|description=CAGE_peak_1_at_Gm10712_5end,CAGE_peak_1_at_Gm14438_5end,CAGE_peak_1_at_Gm15501_5end,CAGE_peak_1_at_Rps8_5end | |||
|id=chr4:116828680..116828690,- | |||
|ontology_enrichment_celltype=CL:0000988!3.81e-10!32;CL:0002032!3.81e-10!32;CL:0000037!3.81e-10!32;CL:0000566!3.81e-10!32;CL:0000837!3.81e-10!32;CL:0000542!2.12e-08!13;CL:0000051!2.12e-08!13;CL:0000838!2.64e-08!12;CL:0000084!1.24e-07!11;CL:0000827!1.24e-07!11;CL:0002031!2.28e-07!25;CL:0000791!2.71e-07!9;CL:0000789!2.71e-07!9;CL:0002420!2.71e-07!9;CL:0002419!2.71e-07!9;CL:0000790!2.71e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.51e-10,32;CL:0002032,3.51e-10,32;CL:0000037,3.51e-10,32;CL:0000837,3.51e-10,32;CL:0000542,2.11e-08,13;CL:0000051,2.11e-08,13;CL:0000838,2.64e-08,12;CL:0000084,1.24e-07,11;CL:0000827,1.24e-07,11;CL:0002031,2.12e-07,25;CL:0000791,2.71e-07,9;CL:0000789,2.71e-07,9;CL:0002420,2.71e-07,9;CL:0002419,2.71e-07,9;CL:0000790,2.71e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=13.1322054625931,4.18770489167233,7.73498706962211,3.93203474698879,3.00537437967808,6.71517087647559,5.60670337429262,10.0716192284429,30.2695752626083,30.4283884218592,9.93064215707929,16.9116977070113,7.70403284690426,13.8124235822016,5.3297561890506,3.84703008040669,4.19737126876888,6.46697438984387,4.52477630898938,7.21462408056651,3.31668831589172,5.85816612085223,3.91799683708403,1.11994695955385,2.75291137280604,3.44539178469012,6.8921919385452,4.52489588640367,1.90023419456374,4.28451220591882,4.8780712344167,15.2407361630311,11.6862309641068,0,12.1317680295535,9.64160943079256,18.5794114198756,4.60384793810598,2.3440060335714,2.61761871986899,3.52938892818609,8.19654581950135,6.79714494243615,1.76255545165808,2.53442328048786,2.56965453026354,2.34717403304412,0.65407546914134,1.5378032791413,0.194429899074283,1.39986421625363,1.43752564364972,15.939347575485,14.5072428402269,12.7715643674136,2.82985379639542,2.29226751951005,3.09403255366465,3.03474691289397,3.1739458756322,1.26766280701236,1.0165335962074,0.889294796111139,1.3498495759221,0,0.7104801149461,1.19840044207362,2.68952813725088,1.76272340924412,2.70011876663381,1.47227472945967,3.42781181284564,3.09215957332259,1.10241719293459,2.30029130443767,1.83843757322004,1.10115880999389,1.91531007127782,0.768032666281217,2.1101806036831,1.64677758484337,2.6045668527838,2.23346399201105,0.56276261003168,2.75036845998258,1.47314292736834,1.99320353118744,2.42319279572891,3.48340489332647,1.5870027622425,5.2175607966302,2.58127163094416,4.0798280022465,1.07940638327563,0.649776417447669,1.79210754838934,1.54488862144927,2.21559419351475,2.33807404142582,2.47337702157238,9.57735254481427,0,0,0,2.38140145112336,2.53359865475099,3.0331466700887,1.82694207550496,1.8125651855302,1.7813056687779,4.3371331691534,4.56698217468212,2.53677046981664,3.3158980921577,4.11560474974967,2.89033160058254,1.73036477414062,1.73519228303894,1.76922110389975,2.42650274921114,1.76673214768315,0.969750506270444,0,3.51336956413857,5.86450779077674,2.04365644166873,8.50687383992034,9.59844369589452,7.11593271609162,2.54644086988199,2.28750301409313,4.64921102817598,2.43354048269187,2.81287003063364,2.0778804455956,2.59586020908412,5.29564692021645,2.73695335342205,2.0217820674694,1.89397670297827,3.90361328888111,3.67843367093557,4.86167750474443,3.76762044589288,5.30684693380357,5.38077625196369,4.68508622798644,3.3631438196072,2.80238390812695,3.40390944302075,3.34307135911503,4.60311038097907,4.72680323683516,4.87553033131033,4.11564272815887,5.9710280045548,4.91549231119264,4.11756651383544,8.24074148247219,3.10688658803253,4.22146907965973,3.24111710629827,4.26140524053378,2.36117078096885,2.62254091908543,3.95307706075693,2.14618721119695,2.33530684734339,2.79751744852917,2.29834449710733,3.16168357228837,3.21639972335731,1.3173006917463,1.74468344388483,1.89260953707715,3.70456604565424,0.991256348951394,2.64450566663544,4.26576501070468,5.10920678092965,2.83508414908605,2.21851877085677,4.00280478920767,3.23383564391351,1.89811624617805,3.29397909448022,3.2673577144035,2.78539060857611,2.53453313254856,5.39291645192533,2.16138049874694,2.19055400579804,5.50036912763937,5.9409226557059,1.1270773567308,2.24016460629846,4.07300223052014,5.04977903210294,3.09859031908861,3.39503340353085,2.66897837330337,1.97435462274881,1.77871576252289,3.17005700860579,2.55526693647164,2.69834534861824,2.02860121388503,3.61765739628625,2.03700681425136,2.5892652370573,3.56697498905078,2.19649130550465,1.43768206527355,2.97712758134803,3.12037673114561,2.77836765741823,2.69096120282868,1.92977408545347,1.66277871149944,3.97931964718018,3.09633455239849,5.60158783058121,3.75504397261603,2.68010011906905,3.33261097240419,5.07347484430277,2.04925687338048,4.20782910332672,3.6674596791222,4.09658286789345,2.59027472798843,5.06271705035291,4.52373851817817,1.08781136763742,0.983528546038072,5.24279817978992,1.76605648986571,3.16471553798949,0.655739781506702,1.51482556322624,5.36363973007636,3.12350995437311,3.23135096599198,2.15071918157297,2.22798674082394,3.11384183867716,2.02405350837447,2.63030272120181,1.97643888973262,1.92792789853084,2.55492153374884,5.1639025063504,5.86393053672874,2.96946221350564,2.65490276679926,4.61283208694465,3.93020624054176,6.97838795096823,3.54362271456927,2.76691633149535,5.94385074286909,5.08947221268508,4.27796854061666,4.42451461110142,4.21674434299995,7.21948802737308,3.74483566329167,4.14140516272013,3.88076051348264,3.42939256050548,3.3694644392032,4.63758925765383,3.62007845324666,4.56697423671899,1.40803024838226,1.90648863777438,3.08739757276947,3.2977250588296,3.22928853391811,4.82503399425247,4.05865969610664,2.9545361954111,2.04036585640896,1.29797711407357,2.22132145037209,4.74689796315412,3.51869602002452,3.57900068308913,5.33107488111998,4.11800711771741,8.83887835968048,9.09684440103777,9.12119827109197,2.86401185404534,3.00519193902079,2.84647253977588,4.10420295122845,4.80903080833278,3.05707589244649,3.911066045159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| |phase1_expression=13.1322054625931,4.18770489167233,7.73498706962211,3.93203474698879,3.00537437967808,6.71517087647559,5.60670337429262,10.0716192284429,30.2695752626083,30.4283884218592,9.93064215707929,16.9116977070113,7.70403284690426,13.8124235822016,5.3297561890506,3.84703008040669,4.19737126876888,6.46697438984387,4.52477630898938,7.21462408056651,3.31668831589172,5.85816612085223,3.91799683708403,1.11994695955385,2.75291137280604,3.44539178469012,6.8921919385452,4.52489588640367,1.90023419456374,4.28451220591882,4.8780712344167,15.2407361630311,11.6862309641068,0,12.1317680295535,9.64160943079256,18.5794114198756,4.60384793810598,2.3440060335714,2.61761871986899,3.52938892818609,8.19654581950135,6.79714494243615,1.76255545165808,2.53442328048786,2.56965453026354,2.34717403304412,0.65407546914134,1.5378032791413,0.194429899074283,1.39986421625363,1.43752564364972,15.939347575485,14.5072428402269,12.7715643674136,2.82985379639542,2.29226751951005,3.09403255366465,3.03474691289397,3.1739458756322,1.26766280701236,1.0165335962074,0.889294796111139,1.3498495759221,0,0.7104801149461,1.19840044207362,2.68952813725088,1.76272340924412,2.70011876663381,1.47227472945967,3.42781181284564,3.09215957332259,1.10241719293459,2.30029130443767,1.83843757322004,1.10115880999389,1.91531007127782,0.768032666281217,2.1101806036831,1.64677758484337,2.6045668527838,2.23346399201105,0.56276261003168,2.75036845998258,1.47314292736834,1.99320353118744,2.42319279572891,3.48340489332647,1.5870027622425,5.2175607966302,2.58127163094416,4.0798280022465,1.07940638327563,0.649776417447669,1.79210754838934,1.54488862144927,2.21559419351475,2.33807404142582,2.47337702157238,9.57735254481427,0,0,0,2.38140145112336,2.53359865475099,3.0331466700887,1.82694207550496,1.8125651855302,1.7813056687779,4.3371331691534,4.56698217468212,2.53677046981664,3.3158980921577,4.11560474974967,2.89033160058254,1.73036477414062,1.73519228303894,1.76922110389975,2.42650274921114,1.76673214768315,0.969750506270444,0,3.51336956413857,5.86450779077674,2.04365644166873,8.50687383992034,9.59844369589452,7.11593271609162,2.54644086988199,2.28750301409313,4.64921102817598,2.43354048269187,2.81287003063364,2.0778804455956,2.59586020908412,5.29564692021645,2.73695335342205,2.0217820674694,1.89397670297827,3.90361328888111,3.67843367093557,4.86167750474443,3.76762044589288,5.30684693380357,5.38077625196369,4.68508622798644,3.3631438196072,2.80238390812695,3.40390944302075,3.34307135911503,4.60311038097907,4.72680323683516,4.87553033131033,4.11564272815887,5.9710280045548,4.91549231119264,4.11756651383544,8.24074148247219,3.10688658803253,4.22146907965973,3.24111710629827,4.26140524053378,2.36117078096885,2.62254091908543,3.95307706075693,2.14618721119695,2.33530684734339,2.79751744852917,2.29834449710733,3.16168357228837,3.21639972335731,1.3173006917463,1.74468344388483,1.89260953707715,3.70456604565424,0.991256348951394,2.64450566663544,4.26576501070468,5.10920678092965,2.83508414908605,2.21851877085677,4.00280478920767,3.23383564391351,1.89811624617805,3.29397909448022,3.2673577144035,2.78539060857611,2.53453313254856,5.39291645192533,2.16138049874694,2.19055400579804,5.50036912763937,5.9409226557059,1.1270773567308,2.24016460629846,4.07300223052014,5.04977903210294,3.09859031908861,3.39503340353085,2.66897837330337,1.97435462274881,1.77871576252289,3.17005700860579,2.55526693647164,2.69834534861824,2.02860121388503,3.61765739628625,2.03700681425136,2.5892652370573,3.56697498905078,2.19649130550465,1.43768206527355,2.97712758134803,3.12037673114561,2.77836765741823,2.69096120282868,1.92977408545347,1.66277871149944,3.97931964718018,3.09633455239849,5.60158783058121,3.75504397261603,2.68010011906905,3.33261097240419,5.07347484430277,2.04925687338048,4.20782910332672,3.6674596791222,4.09658286789345,2.59027472798843,5.06271705035291,4.52373851817817,1.08781136763742,0.983528546038072,5.24279817978992,1.76605648986571,3.16471553798949,0.655739781506702,1.51482556322624,5.36363973007636,3.12350995437311,3.23135096599198,2.15071918157297,2.22798674082394,3.11384183867716,2.02405350837447,2.63030272120181,1.97643888973262,1.92792789853084,2.55492153374884,5.1639025063504,5.86393053672874,2.96946221350564,2.65490276679926,4.61283208694465,3.93020624054176,6.97838795096823,3.54362271456927,2.76691633149535,5.94385074286909,5.08947221268508,4.27796854061666,4.42451461110142,4.21674434299995,7.21948802737308,3.74483566329167,4.14140516272013,3.88076051348264,3.42939256050548,3.3694644392032,4.63758925765383,3.62007845324666,4.56697423671899,1.40803024838226,1.90648863777438,3.08739757276947,3.2977250588296,3.22928853391811,4.82503399425247,4.05865969610664,2.9545361954111,2.04036585640896,1.29797711407357,2.22132145037209,4.74689796315412,3.51869602002452,3.57900068308913,5.33107488111998,4.11800711771741,8.83887835968048,9.09684440103777,9.12119827109197,2.86401185404534,3.00519193902079,2.84647253977588,4.10420295122845,4.80903080833278,3.05707589244649,3.911066045159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| ||
|short_description=p1@Gm10712,p1@Gm14438,p1@Gm15501,p1@Rps8 | |||
}} | }} |
Latest revision as of 05:34, 26 September 2015
Short description: | p1@Gm10712, p1@Gm14438, p1@Gm15501, p1@Rps8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm10712_5end, CAGE_peak_1_at_Gm14438_5end, CAGE_peak_1_at_Gm15501_5end, CAGE_peak_1_at_Rps8_5end |
Coexpression cluster: | MCL_coexpression_mm9:155 |
Association with transcript: | 0bp_to_ENSMUST00000140226_5end |
EntrezGene: | 100040298,100043763,100502877,20116 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.51e-10 | 32 |
hematopoietic oligopotent progenitor cell | 3.51e-10 | 32 |
hematopoietic stem cell | 3.51e-10 | 32 |
hematopoietic multipotent progenitor cell | 3.51e-10 | 32 |
lymphocyte | 2.11e-08 | 13 |
common lymphoid progenitor | 2.11e-08 | 13 |
lymphoid lineage restricted progenitor cell | 2.64e-08 | 12 |
T cell | 1.24e-07 | 11 |
pro-T cell | 1.24e-07 | 11 |
hematopoietic lineage restricted progenitor cell | 2.12e-07 | 25 |
mature alpha-beta T cell | 2.71e-07 | 9 |
alpha-beta T cell | 2.71e-07 | 9 |
immature T cell | 2.71e-07 | 9 |
mature T cell | 2.71e-07 | 9 |
immature alpha-beta T cell | 2.71e-07 | 9 |