FFCP PHASE1:Mm9::chr17:32557862..32557893,-: Difference between revisions
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{{FFCP|EntrezGene=57757|HGNC=|MCL_coexpression_id=8|UniProt=E9Q595,Q8VCS0,Q71S36,Q71S44,Q71S45|association_with_transcript=26bp_to_ENSMUST00000114454,ENSMUST00000114456,ENSMUST00000164878,ENSMUST00000170392,NM_021319,uc008bwz.2,uc008bxa.2,uc012aoz.1,uc012apa.1_5end|description=CAGE_peak_3_at_Pglyrp2_5end|id=chr17:32557862..32557893,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,4.95e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!8.40e-24!22;UBERON:0007499!8.40e-24!22;UBERON:0006925!8.40e-24!22;UBERON:0009497!8.40e-24!22;UBERON:0000015!8.40e-24!22;UBERON:0002423!8.40e-24!22;UBERON:0006235!8.40e-24!22;UBERON:0008835!8.40e-24!22;UBERON:0003894!8.40e-24!22;UBERON:0004161!8.40e-24!22;UBERON:0008836!8.40e-24!22;UBERON:0009854!2.02e-22!23;UBERON:0009856!2.02e-22!23;UBERON:0002365!5.36e-20!25;UBERON:0002330!5.36e-20!25;UBERON:0005172!1.58e-13!49;UBERON:0005173!1.58e-13!49;UBERON:0002417!1.58e-13!49;UBERON:0000916!1.58e-13!49;UBERON:0005256!1.45e-12!47;UBERON:0009569!1.92e-10!66;UBERON:0002368!4.30e-10!60;UBERON:0005057!7.15e-09!51;UBERON:0002530!1.22e-08!65;UBERON:0003929!1.80e-08!55;UBERON:0003914!4.92e-08!47;UBERON:0005911!2.13e-07!69;UBERON:0000949!5.49e-07!72|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.23e-33,22;UBERON:0007499,1.23e-33,22;UBERON:0006925,1.23e-33,22;UBERON:0009497,1.23e-33,22;UBERON:0000015,1.23e-33,22;UBERON:0002423,1.23e-33,22;UBERON:0006235,1.23e-33,22;UBERON:0008835,1.23e-33,22;UBERON:0003894,1.23e-33,22;UBERON:0004161,1.23e-33,22;UBERON:0008836,1.23e-33,22;UBERON:0009854,6.46e-32,23;UBERON:0009856,6.46e-32,23;UBERON:0002365,6.85e-29,25;UBERON:0002330,6.85e-29,25;UBERON:0005256,1.69e-13,45;UBERON:0003914,1.09e-12,47;UBERON:0005172,6.02e-12,49;UBERON:0005173,6.02e-12,49;UBERON:0002417,6.02e-12,49;UBERON:0000916,6.02e-12,49;UBERON:0003929,4.71e-10,55;UBERON:0002368,8.94e-09,60;UBERON:0003104,1.52e-08,61;UBERON:0009142,1.52e-08,61;UBERON:0002530,1.06e-07,65;UBERON:0000490,1.65e-07,66;UBERON:0009569,1.65e-07,66;UBERON:0005911,5.79e-07,69;UBERON:0001041,7.42e-07,80|phase1_expression=0,0,0.454999239389536,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.7897491705719,40.798280022465,44.7953649059388,51.9821133958135,39.4263660645655,10.5333315098814,0,0,0,0,0,0,0,0,0,0,14.9580882431969,0,0.29688427812965,0,0.608930956624282,0.922461989024234,0.301445281105245,0.705532242814229,0.376999773989026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90422890701429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0.502670417600539,0.397912944082302,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0,34.6849573691964,0.166845105716094,1.76903095601883,3.14806957338795,6.08580364165509,10.3706178693539,26.4810885852677,19.8510334841059,28.8600703659563,58.2070195958733,47.443508154027,117.968680410916,109.837260936325,62.3869828529366,63.327286973235,91.6642690590398,0,0.189491411770485,0,0,0,0,0.238043640886014,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534196811001766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,2.02296519577231,16.3653842336165,0,0,0,0,0,0,0,0,0,0,3.9061315453185,0,0,0,0,0,0,0,0,0,0.240390899039938,0,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21553358534147,1.25767897576789,1.2869045591501,1.33348036680969,1.23621034343337,0.962757628775446,0.758091635291392,1.01391719956096,1.88626341386076,1.40462261204824,1.15245274328765,1.26358031702349,0.952587382566147,0.927074607558844,0.964546102318525,2.06042950401653,1.32479028120958,2.05721551431249,1.59728225543404,2.62279808942053,1.88950341622027,1.12931256498397,1.52306294205018,1.09756783723664,0.789209134313529,1.49384525230448,1.68342681497322,2.01679530811096,0.886540341380071,0.818462086339379,0.77468420592983,2.3148793317737,0,1.87145286756327,2.79332370262788,0,1.76473135295612,0.231867835620421|short_description=p3@Pglyrp2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=57757 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q595,Q8VCS0,Q71S36,Q71S44,Q71S45 | |||
|association_with_transcript=26bp_to_ENSMUST00000114454,ENSMUST00000114456,ENSMUST00000164878,ENSMUST00000170392,NM_021319,uc008bwz.2,uc008bxa.2,uc012aoz.1,uc012apa.1_5end | |||
|cluster_id=chr17:32557862..32557893,- | |||
|description=CAGE_peak_3_at_Pglyrp2_5end | |||
|id=chr17:32557862..32557893,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.95e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!8.40e-24!22;UBERON:0007499!8.40e-24!22;UBERON:0006925!8.40e-24!22;UBERON:0009497!8.40e-24!22;UBERON:0000015!8.40e-24!22;UBERON:0002423!8.40e-24!22;UBERON:0006235!8.40e-24!22;UBERON:0008835!8.40e-24!22;UBERON:0003894!8.40e-24!22;UBERON:0004161!8.40e-24!22;UBERON:0008836!8.40e-24!22;UBERON:0009854!2.02e-22!23;UBERON:0009856!2.02e-22!23;UBERON:0002365!5.36e-20!25;UBERON:0002330!5.36e-20!25;UBERON:0005172!1.58e-13!49;UBERON:0005173!1.58e-13!49;UBERON:0002417!1.58e-13!49;UBERON:0000916!1.58e-13!49;UBERON:0005256!1.45e-12!47;UBERON:0009569!1.92e-10!66;UBERON:0002368!4.30e-10!60;UBERON:0005057!7.15e-09!51;UBERON:0002530!1.22e-08!65;UBERON:0003929!1.80e-08!55;UBERON:0003914!4.92e-08!47;UBERON:0005911!2.13e-07!69;UBERON:0000949!5.49e-07!72 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.23e-33,22;UBERON:0007499,1.23e-33,22;UBERON:0006925,1.23e-33,22;UBERON:0009497,1.23e-33,22;UBERON:0000015,1.23e-33,22;UBERON:0002423,1.23e-33,22;UBERON:0006235,1.23e-33,22;UBERON:0008835,1.23e-33,22;UBERON:0003894,1.23e-33,22;UBERON:0004161,1.23e-33,22;UBERON:0008836,1.23e-33,22;UBERON:0009854,6.46e-32,23;UBERON:0009856,6.46e-32,23;UBERON:0002365,6.85e-29,25;UBERON:0002330,6.85e-29,25;UBERON:0005256,1.69e-13,45;UBERON:0003914,1.09e-12,47;UBERON:0005172,6.02e-12,49;UBERON:0005173,6.02e-12,49;UBERON:0002417,6.02e-12,49;UBERON:0000916,6.02e-12,49;UBERON:0003929,4.71e-10,55;UBERON:0002368,8.94e-09,60;UBERON:0003104,1.52e-08,61;UBERON:0009142,1.52e-08,61;UBERON:0002530,1.06e-07,65;UBERON:0000490,1.65e-07,66;UBERON:0009569,1.65e-07,66;UBERON:0005911,5.79e-07,69;UBERON:0001041,7.42e-07,80 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.7897491705719,40.798280022465,44.7953649059388,51.9821133958135,39.4263660645655,10.5333315098814,0,0,0,0,0,0,0,0,0,0,14.9580882431969,0,0.29688427812965,0,0.608930956624282,0.922461989024234,0.301445281105245,0.705532242814229,0.376999773989026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90422890701429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0.502670417600539,0.397912944082302,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0,34.6849573691964,0.166845105716094,1.76903095601883,3.14806957338795,6.08580364165509,10.3706178693539,26.4810885852677,19.8510334841059,28.8600703659563,58.2070195958733,47.443508154027,117.968680410916,109.837260936325,62.3869828529366,63.327286973235,91.6642690590398,0,0.189491411770485,0,0,0,0,0.238043640886014,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534196811001766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,2.02296519577231,16.3653842336165,0,0,0,0,0,0,0,0,0,0,3.9061315453185,0,0,0,0,0,0,0,0,0,0.240390899039938,0,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21553358534147,1.25767897576789,1.2869045591501,1.33348036680969,1.23621034343337,0.962757628775446,0.758091635291392,1.01391719956096,1.88626341386076,1.40462261204824,1.15245274328765,1.26358031702349,0.952587382566147,0.927074607558844,0.964546102318525,2.06042950401653,1.32479028120958,2.05721551431249,1.59728225543404,2.62279808942053,1.88950341622027,1.12931256498397,1.52306294205018,1.09756783723664,0.789209134313529,1.49384525230448,1.68342681497322,2.01679530811096,0.886540341380071,0.818462086339379,0.77468420592983,2.3148793317737,0,1.87145286756327,2.79332370262788,0,1.76473135295612,0.231867835620421 | |||
|short_description=p3@Pglyrp2 | |||
}} |
Latest revision as of 06:21, 26 September 2015
Short description: | p3@Pglyrp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pglyrp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 26bp_to_ENSMUST00000114454, ENSMUST00000114456, ENSMUST00000164878, ENSMUST00000170392, NM_021319, uc008bwz.2, uc008bxa.2, uc012aoz.1, uc012apa.1_5end |
EntrezGene: | Pglyrp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.95e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 1.23e-33 | 22 |
epithelial sac | 1.23e-33 | 22 |
digestive gland | 1.23e-33 | 22 |
epithelium of foregut-midgut junction | 1.23e-33 | 22 |
anatomical boundary | 1.23e-33 | 22 |
hepatobiliary system | 1.23e-33 | 22 |
foregut-midgut junction | 1.23e-33 | 22 |
hepatic diverticulum | 1.23e-33 | 22 |
liver primordium | 1.23e-33 | 22 |
septum transversum | 1.23e-33 | 22 |
liver bud | 1.23e-33 | 22 |
digestive tract diverticulum | 6.46e-32 | 23 |
sac | 6.46e-32 | 23 |
exocrine gland | 6.85e-29 | 25 |
exocrine system | 6.85e-29 | 25 |
trunk mesenchyme | 1.69e-13 | 45 |
epithelial tube | 1.09e-12 | 47 |
abdomen element | 6.02e-12 | 49 |
abdominal segment element | 6.02e-12 | 49 |
abdominal segment of trunk | 6.02e-12 | 49 |
abdomen | 6.02e-12 | 49 |
gut epithelium | 4.71e-10 | 55 |
endocrine gland | 8.94e-09 | 60 |
mesenchyme | 1.52e-08 | 61 |
entire embryonic mesenchyme | 1.52e-08 | 61 |
gland | 1.06e-07 | 65 |
unilaminar epithelium | 1.65e-07 | 66 |
subdivision of trunk | 1.65e-07 | 66 |
endo-epithelium | 5.79e-07 | 69 |
foregut | 7.42e-07 | 80 |