FFCP PHASE1:Mm9::chr10:75034248..75034257,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14598 | |EntrezGene=14598 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=31 | |||
|TSSclassifier=NA | |||
|UniProt=D3YWW4 | |UniProt=D3YWW4 | ||
|association_with_transcript=-13bp_to_ENSMUST00000143226_5end | |association_with_transcript=-13bp_to_ENSMUST00000143226_5end | ||
|cluster_id=chr10:75034248..75034257,+ | |||
|description=CAGE_peak_18_at_Ggt1_5end | |description=CAGE_peak_18_at_Ggt1_5end | ||
|id=chr10:75034248..75034257,+ | |id=chr10:75034248..75034257,+ | ||
|ontology_enrichment_celltype=CL:0000708!3.38e-07!2 | |ontology_enrichment_celltype=CL:0000708!3.38e-07!2 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!2.35e-25!14;UBERON:0003918!2.35e-25!14;UBERON:0005095!2.35e-25!14;UBERON:0007687!2.35e-25!14;UBERON:0006554!6.50e-22!16;UBERON:0001008!1.70e-20!17;UBERON:0000489!3.56e-16!21;UBERON:0005631!1.58e-10!3;UBERON:0000478!1.58e-10!3;UBERON:0000158!1.58e-10!3;UBERON:0004871!1.81e-09!3;UBERON:0001301!2.07e-09!3;UBERON:0006555!2.07e-09!3;UBERON:0005103!2.07e-09!3;UBERON:0000083!2.07e-09!3;UBERON:0009201!2.07e-09!3;UBERON:0004819!2.07e-09!3;UBERON:0006553!2.07e-09!3;UBERON:0003074!2.07e-09!3;UBERON:0003060!2.07e-09!3;UBERON:0004175!2.52e-08!9;UBERON:0001987!1.91e-07!2;UBERON:0003124!1.91e-07!2;UBERON:0004340!1.91e-07!2;UBERON:0003210!3.38e-07!2;UBERON:0000080!3.67e-07!4;UBERON:0005904!3.67e-07!4;UBERON:0006947!3.67e-07!4;UBERON:0002120!3.67e-07!4;UBERON:0004054!3.67e-07!4;UBERON:0004875!3.67e-07!4;UBERON:0004876!3.67e-07!4;UBERON:0005721!3.67e-07!4;UBERON:0005754!3.67e-07!4;UBERON:0007297!3.67e-07!4;UBERON:0003103!8.37e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006554,4.44e-25,18;UBERON:0001008,8.84e-24,19;UBERON:0002113,2.18e-22,14;UBERON:0003918,2.18e-22,14;UBERON:0011143,2.18e-22,14;UBERON:0005095,2.18e-22,14;UBERON:0007687,2.18e-22,14;UBERON:0005631,6.07e-18,3;UBERON:0000478,6.07e-18,3;UBERON:0000158,6.07e-18,3;UBERON:0000489,4.54e-15,21;UBERON:0000305,6.50e-14,1;UBERON:0001987,9.82e-08,2;UBERON:0003124,9.82e-08,2;UBERON:0004340,9.82e-08,2;UBERON:0003103,1.65e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,1.48316980640624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,1.26361379216837,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0.380451252225118,0,0,0,0,0,0,0,0,0,0,1.1270773567308,0.610953983535943,0.193952487167626,1.19230893813542,0.948548056863859,1.77132177575523,1.41298855057237,0.987177311374404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0.23467170806371,7.62595455109753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,1.48316980640624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,1.26361379216837,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0.380451252225118,0,0,0,0,0,0,0,0,0,0,1.1270773567308,0.610953983535943,0.193952487167626,1.19230893813542,0.948548056863859,1.77132177575523,1.41298855057237,0.987177311374404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0.23467170806371,7.62595455109753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p18@Ggt1 | |short_description=p18@Ggt1 | ||
}} | }} |
Latest revision as of 07:04, 26 September 2015
Short description: | p18@Ggt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_Ggt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:31 |
Association with transcript: | -13bp_to_ENSMUST00000143226_5end |
EntrezGene: | Ggt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urinary system structure | 4.44e-25 | 18 |
renal system | 8.84e-24 | 19 |
kidney | 2.18e-22 | 14 |
kidney mesenchyme | 2.18e-22 | 14 |
upper urinary tract | 2.18e-22 | 14 |
kidney rudiment | 2.18e-22 | 14 |
kidney field | 2.18e-22 | 14 |
extraembryonic membrane | 6.07e-18 | 3 |
extraembryonic structure | 6.07e-18 | 3 |
membranous layer | 6.07e-18 | 3 |
cavitated compound organ | 4.54e-15 | 21 |
amnion | 6.50e-14 | 1 |
placenta | 9.82e-08 | 2 |
chorion | 9.82e-08 | 2 |
allantois | 9.82e-08 | 2 |
compound organ | 1.65e-07 | 43 |