FFCP PHASE1:Mm9::chr17:34341776..34341809,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21355 | |EntrezGene=21355 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=A6X8J6 | |UniProt=A6X8J6 | ||
|association_with_transcript=-235bp_to_ENSMUST00000131105_5end | |association_with_transcript=-235bp_to_ENSMUST00000131105_5end | ||
|cluster_id=chr17:34341776..34341809,+ | |||
|description=CAGE_peak_4_at_Tap2_5end | |description=CAGE_peak_4_at_Tap2_5end | ||
|id=chr17:34341776..34341809,+ | |id=chr17:34341776..34341809,+ | ||
|ontology_enrichment_celltype=CL:0000075!1.52e-07!7;CL:0000239!3.73e-07!6;CL:0000677!3.73e-07!6;CL:0000212!3.73e-07!6;CL:0000584!3.73e-07!6 | |ontology_enrichment_celltype=CL:0000075!1.52e-07!7;CL:0000239!3.73e-07!6;CL:0000677!3.73e-07!6;CL:0000212!3.73e-07!6;CL:0000584!3.73e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.34e-26,6;CL:0000677,1.34e-26,6;CL:0000584,1.34e-26,6;CL:0000075,9.73e-23,7;CL:0002563,1.39e-17,9;CL:0002251,1.39e-17,9;CL:0000066,2.36e-16,25;CL:0000682,2.98e-14,3;CL:0002076,8.89e-14,15;CL:0000223,3.94e-10,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.17e-09!15;UBERON:0004923!5.43e-08!24;UBERON:0001242!1.12e-07!13;UBERON:0000060!1.12e-07!13;UBERON:0001262!1.12e-07!13;UBERON:0004786!1.12e-07!13 | |ontology_enrichment_uberon=UBERON:0000344!2.17e-09!15;UBERON:0004923!5.43e-08!24;UBERON:0001242!1.12e-07!13;UBERON:0000060!1.12e-07!13;UBERON:0001262!1.12e-07!13;UBERON:0004786!1.12e-07!13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.16e-27,15;UBERON:0001242,1.41e-20,13;UBERON:0001262,1.41e-20,13;UBERON:0004786,1.41e-20,13;UBERON:0003350,1.39e-17,9;UBERON:0004808,1.39e-17,9;UBERON:0001277,1.39e-17,9;UBERON:0004923,1.02e-16,24;UBERON:0000485,2.68e-14,11;UBERON:0000160,4.67e-10,31;UBERON:0001962,1.11e-09,2;UBERON:0001961,1.11e-09,2;UBERON:0001744,1.11e-09,2 | |||
|phase1_expression=0.160148847104794,13.2610654902957,16.3799726180233,12.7034968748869,10.0179145989269,6.04365378882803,3.50418960893289,0.903863264091034,0.140788722151667,0,0,0.0797721589953364,0.513602189793617,1.04904482902797,0.333109761815663,0,0,0.315462165358238,0,0,0.0850432901510698,1.39007331681239,0.261199789138935,3.83981814704176,6.65286915094793,10.3361753540704,14.2151458732495,8.83432054012145,0.190023419456374,0.756090389279792,2.66076612786366,0,0,0,0,0.166234645358492,0,1.67412652294763,0.7813353445238,0.523523743973798,2.94115744015507,3.41522742479223,2.42755176515577,0.251793635951155,0.101376931219515,0.183546752161682,0.782391344348039,0.218025156380447,0.878744730937887,0.388859798148567,0,0,0.167782606057736,0.725362142011344,0,0.257259436035947,0,0,0,0,0,0,0.889294796111139,0,0.988866362566974,0,0.299600110518405,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0.307213066512487,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0.35333957451034,0.281686839553361,0,2.54805239706646,0,0,0,0,0.91347103775248,0,0.29688427812965,0,0,0.230615497256059,0,0,0.125666591329675,0.247194967734374,0.289198713839823,0,0.323533699894818,0,0,0,0,0,0.510914110417183,0.11981512450592,0,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0.210289948564127,0,1.65209391491899,1.85115396664481,0,0,0,0.201683524623343,0,0,0.474529061544512,0,0,0,0,0.898819408654221,0.216138049874694,0.597423819763102,0,0,0,0,0,0.140271639780637,0.0632365371242573,0,0.156998727841375,0,0,0,0,0.224862112384854,0.202860121388503,0.241177159752417,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0,0,0,0,0,0,0.476087281772027,0.195133647857799,0.157635144106191,0.44292937929755,0,0.327726629431476,0.172684981865896,0,0,0,0,0,0.160550589987792,0,0,0,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0.291480836629851,0,0.170870880797853,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0.339956859987711,0,0.552799895217695,0,0,0,0,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0.25984164595559,0,0,0.480781798079875,0.147689527174577,0.100966449948148,0.15241361331,0.100826185136841,0.38983152295901,0.577271049841977,0.584384510907845,0,0,0.179427713218951,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0,0,0.128050304809739,0.0574354689556133,0,0.231768651889711,0,0,0,0.685738504770831,0,0,0.145346416632329,0.0941093804153306,0,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0,0,0,0.220591419119515,0.463735671240843 | |phase1_expression=0.160148847104794,13.2610654902957,16.3799726180233,12.7034968748869,10.0179145989269,6.04365378882803,3.50418960893289,0.903863264091034,0.140788722151667,0,0,0.0797721589953364,0.513602189793617,1.04904482902797,0.333109761815663,0,0,0.315462165358238,0,0,0.0850432901510698,1.39007331681239,0.261199789138935,3.83981814704176,6.65286915094793,10.3361753540704,14.2151458732495,8.83432054012145,0.190023419456374,0.756090389279792,2.66076612786366,0,0,0,0,0.166234645358492,0,1.67412652294763,0.7813353445238,0.523523743973798,2.94115744015507,3.41522742479223,2.42755176515577,0.251793635951155,0.101376931219515,0.183546752161682,0.782391344348039,0.218025156380447,0.878744730937887,0.388859798148567,0,0,0.167782606057736,0.725362142011344,0,0.257259436035947,0,0,0,0,0,0,0.889294796111139,0,0.988866362566974,0,0.299600110518405,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0.307213066512487,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0.35333957451034,0.281686839553361,0,2.54805239706646,0,0,0,0,0.91347103775248,0,0.29688427812965,0,0,0.230615497256059,0,0,0.125666591329675,0.247194967734374,0.289198713839823,0,0.323533699894818,0,0,0,0,0,0.510914110417183,0.11981512450592,0,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0.210289948564127,0,1.65209391491899,1.85115396664481,0,0,0,0.201683524623343,0,0,0.474529061544512,0,0,0,0,0.898819408654221,0.216138049874694,0.597423819763102,0,0,0,0,0,0.140271639780637,0.0632365371242573,0,0.156998727841375,0,0,0,0,0.224862112384854,0.202860121388503,0.241177159752417,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0,0,0,0,0,0,0.476087281772027,0.195133647857799,0.157635144106191,0.44292937929755,0,0.327726629431476,0.172684981865896,0,0,0,0,0,0.160550589987792,0,0,0,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0.291480836629851,0,0.170870880797853,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0.339956859987711,0,0.552799895217695,0,0,0,0,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0.25984164595559,0,0,0.480781798079875,0.147689527174577,0.100966449948148,0.15241361331,0.100826185136841,0.38983152295901,0.577271049841977,0.584384510907845,0,0,0.179427713218951,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0,0,0.128050304809739,0.0574354689556133,0,0.231768651889711,0,0,0,0.685738504770831,0,0,0.145346416632329,0.0941093804153306,0,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0,0,0,0.220591419119515,0.463735671240843 | ||
|short_description=p4@Tap2 | |short_description=p4@Tap2 | ||
}} | }} |
Latest revision as of 07:43, 26 September 2015
Short description: | p4@Tap2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Tap2_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -235bp_to_ENSMUST00000131105_5end |
EntrezGene: | Tap2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.34e-26 | 6 |
gut absorptive cell | 1.34e-26 | 6 |
enterocyte | 1.34e-26 | 6 |
columnar/cuboidal epithelial cell | 9.73e-23 | 7 |
intestinal epithelial cell | 1.39e-17 | 9 |
epithelial cell of alimentary canal | 1.39e-17 | 9 |
epithelial cell | 2.36e-16 | 25 |
M cell of gut | 2.98e-14 | 3 |
endo-epithelial cell | 8.89e-14 | 15 |
endodermal cell | 3.94e-10 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.16e-27 | 15 |
intestinal mucosa | 1.41e-20 | 13 |
wall of intestine | 1.41e-20 | 13 |
gastrointestinal system mucosa | 1.41e-20 | 13 |
epithelium of mucosa | 1.39e-17 | 9 |
gastrointestinal system epithelium | 1.39e-17 | 9 |
intestinal epithelium | 1.39e-17 | 9 |
organ component layer | 1.02e-16 | 24 |
simple columnar epithelium | 2.68e-14 | 11 |
intestine | 4.67e-10 | 31 |
gut-associated lymphoid tissue | 1.11e-09 | 2 |
mucosa-associated lymphoid tissue | 1.11e-09 | 2 |
lymphoid tissue | 1.11e-09 | 2 |