FFCP PHASE1:Mm9::chr9:123587970..123587981,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=102680 | |EntrezGene=102680 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q8VDB9,Q8C604 | |UniProt=Q8VDB9,Q8C604 | ||
|association_with_transcript=-20bp_to_NM_139142,uc009sgk.1_5end | |association_with_transcript=-20bp_to_NM_139142,uc009sgk.1_5end | ||
|cluster_id=chr9:123587970..123587981,- | |||
|description=CAGE_peak_2_at_Slc6a20a_5end | |description=CAGE_peak_2_at_Slc6a20a_5end | ||
|id=chr9:123587970..123587981,- | |id=chr9:123587970..123587981,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.26e-13,6;CL:0000677,4.26e-13,6;CL:0000584,4.26e-13,6;CL:0000075,4.30e-11,7;CL:0002563,2.02e-08,9;CL:0002251,2.02e-08,9;CL:0000682,2.44e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.10e-13!59;UBERON:0000160!1.18e-11!43;UBERON:0000344!2.62e-11!15;UBERON:0004923!5.44e-11!24;UBERON:0001242!1.29e-09!13;UBERON:0000060!1.29e-09!13;UBERON:0001262!1.29e-09!13;UBERON:0004786!1.29e-09!13 | |ontology_enrichment_uberon=UBERON:0005409!2.10e-13!59;UBERON:0000160!1.18e-11!43;UBERON:0000344!2.62e-11!15;UBERON:0004923!5.44e-11!24;UBERON:0001242!1.29e-09!13;UBERON:0000060!1.29e-09!13;UBERON:0001262!1.29e-09!13;UBERON:0004786!1.29e-09!13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.29e-39,31;UBERON:0005409,5.06e-32,47;UBERON:0004923,1.93e-19,24;UBERON:0000344,2.34e-19,15;UBERON:0001242,1.57e-15,13;UBERON:0001262,1.57e-15,13;UBERON:0004786,1.57e-15,13;UBERON:0001007,2.61e-11,116;UBERON:0001555,2.61e-11,116;UBERON:0007026,2.61e-11,116;UBERON:0004119,5.54e-11,118;UBERON:0000925,5.54e-11,118;UBERON:0006595,5.54e-11,118;UBERON:0004921,1.44e-09,114;UBERON:0002108,4.20e-09,4;UBERON:0003350,2.02e-08,9;UBERON:0004808,2.02e-08,9;UBERON:0001277,2.02e-08,9;UBERON:0000331,2.68e-07,3;UBERON:0002116,2.68e-07,3;UBERON:0001204,2.68e-07,3;UBERON:0001168,2.68e-07,3 | |||
|phase1_expression=0.160148847104794,6.97950815278722,12.739978702907,6.65421264875026,17.0304548181758,5.03637815735669,3.73780224952841,0,0,0,0,0,0,0,1.99865857089398,3.64455481301687,2.79824751251259,0,0,0.84877930359606,0.425216450755349,0,0,7.1996590257033,8.94696196161963,7.46501553349526,4.73838195774982,7.32602191132023,4.3705386474966,7.05684363327806,9.09095093686749,0,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0.52091337055676,0,0,0.763991238884051,0,0.142371680799103,0,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,1.7127581957859,0,0,0,0,0,0,0,0,0,0,4.42305275974937,0.323533699894818,1.54589062922275,0.484875253135222,1.86391761218122,0,0.628340120440365,4.85368404896324,0,0,0,0.449371918214468,0,0,0.347648640384553,0.511430914660661,0.41557608911912,0.162241263067758,0,1.7416975885413,0,0,0,0,0.180062129805349,0,0,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.411618449517138,9.58214470653014,4.23120906661671,0,0,1.03093969057675,1.81515172161008,2.00140239460383,1.14135375667535,6.64340686162316,3.12928013975621,1.25667604400135,2.18852119245266,2.33956904542944,5.39291645192533,4.75503709724327,6.17337947088538,0,0,0,0.407302655690628,0,0.49095073923223,0.822074982615345,1.32849133181642,1.72698600625512,0.616985819609003,0,0.500535317148282,0.196558995113203,1.12431056192427,0.405720242777006,0.482354319504834,0.25462585178142,0.575392274901621,0.648540907100142,0.274561413188081,0,0.372140947668503,0,0.252578877947112,0,0,0.923765950833023,0,0.162964976442026,0,0,0,0,0,0,0,0,0.163863314715738,0,0.289298117163023,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0.242780636154981,0,0,0,0,1.55056975900933,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0.329098041204242,0.608929898229199,0.23467170806371,0,0,0.98931751764888,0,0.120625849856312,0.477489376012546,0,4.95517422270746,0,1.53783792718067,0,0.185194527369712,3.01389531207506,3.96413260390973,3.43167259809784,0,0,0,0.954670618015114,0.158167996790568,0,0.108005340821801,0,0,0,0.743881101528023,0.785267825952089,0.518459893167171,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0.226730383615211,0,0,0,0,0.563047426353546,0,0.643105137237198,0,0,0.460325236507177,0,0.171853182343688,0,0,0.675022500231806,0.45032120322422,0,0.51776031175182,0,0,0,0.243106717068294,0,0,0.888986911206461,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0.565879024158229,0.561849044819294,0.384150914429216,0.17230640686684,0,0.347652977834566,0.38581844092741,0,0.441596760403192,0,0.354951612318675,0.238436189947321,0,0.282328141245992,0.338458431566706,0.548783918618318,0.789209134313529,0.407412341537585,0,0.237270036248348,0.492522411877817,0.409231043169689,0.309873682371932,0,0.249810577937946,0.701794825336225,0.429742108096597,0.191288332068843,0.661774257358546,0.463735671240843 | |phase1_expression=0.160148847104794,6.97950815278722,12.739978702907,6.65421264875026,17.0304548181758,5.03637815735669,3.73780224952841,0,0,0,0,0,0,0,1.99865857089398,3.64455481301687,2.79824751251259,0,0,0.84877930359606,0.425216450755349,0,0,7.1996590257033,8.94696196161963,7.46501553349526,4.73838195774982,7.32602191132023,4.3705386474966,7.05684363327806,9.09095093686749,0,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0.52091337055676,0,0,0.763991238884051,0,0.142371680799103,0,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,1.7127581957859,0,0,0,0,0,0,0,0,0,0,4.42305275974937,0.323533699894818,1.54589062922275,0.484875253135222,1.86391761218122,0,0.628340120440365,4.85368404896324,0,0,0,0.449371918214468,0,0,0.347648640384553,0.511430914660661,0.41557608911912,0.162241263067758,0,1.7416975885413,0,0,0,0,0.180062129805349,0,0,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.411618449517138,9.58214470653014,4.23120906661671,0,0,1.03093969057675,1.81515172161008,2.00140239460383,1.14135375667535,6.64340686162316,3.12928013975621,1.25667604400135,2.18852119245266,2.33956904542944,5.39291645192533,4.75503709724327,6.17337947088538,0,0,0,0.407302655690628,0,0.49095073923223,0.822074982615345,1.32849133181642,1.72698600625512,0.616985819609003,0,0.500535317148282,0.196558995113203,1.12431056192427,0.405720242777006,0.482354319504834,0.25462585178142,0.575392274901621,0.648540907100142,0.274561413188081,0,0.372140947668503,0,0.252578877947112,0,0,0.923765950833023,0,0.162964976442026,0,0,0,0,0,0,0,0,0.163863314715738,0,0.289298117163023,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0.242780636154981,0,0,0,0,1.55056975900933,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0.329098041204242,0.608929898229199,0.23467170806371,0,0,0.98931751764888,0,0.120625849856312,0.477489376012546,0,4.95517422270746,0,1.53783792718067,0,0.185194527369712,3.01389531207506,3.96413260390973,3.43167259809784,0,0,0,0.954670618015114,0.158167996790568,0,0.108005340821801,0,0,0,0.743881101528023,0.785267825952089,0.518459893167171,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0.226730383615211,0,0,0,0,0.563047426353546,0,0.643105137237198,0,0,0.460325236507177,0,0.171853182343688,0,0,0.675022500231806,0.45032120322422,0,0.51776031175182,0,0,0,0.243106717068294,0,0,0.888986911206461,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0.565879024158229,0.561849044819294,0.384150914429216,0.17230640686684,0,0.347652977834566,0.38581844092741,0,0.441596760403192,0,0.354951612318675,0.238436189947321,0,0.282328141245992,0.338458431566706,0.548783918618318,0.789209134313529,0.407412341537585,0,0.237270036248348,0.492522411877817,0.409231043169689,0.309873682371932,0,0.249810577937946,0.701794825336225,0.429742108096597,0.191288332068843,0.661774257358546,0.463735671240843 | ||
|short_description=p2@Slc6a20a | |short_description=p2@Slc6a20a | ||
}} | }} |
Latest revision as of 09:17, 26 September 2015
Short description: | p2@Slc6a20a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slc6a20a_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -20bp_to_NM_139142, uc009sgk.1_5end |
EntrezGene: | Slc6a20a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.26e-13 | 6 |
gut absorptive cell | 4.26e-13 | 6 |
enterocyte | 4.26e-13 | 6 |
columnar/cuboidal epithelial cell | 4.30e-11 | 7 |
intestinal epithelial cell | 2.02e-08 | 9 |
epithelial cell of alimentary canal | 2.02e-08 | 9 |
M cell of gut | 2.44e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.29e-39 | 31 |
gastrointestinal system | 5.06e-32 | 47 |
organ component layer | 1.93e-19 | 24 |
mucosa | 2.34e-19 | 15 |
intestinal mucosa | 1.57e-15 | 13 |
wall of intestine | 1.57e-15 | 13 |
gastrointestinal system mucosa | 1.57e-15 | 13 |
digestive system | 2.61e-11 | 116 |
digestive tract | 2.61e-11 | 116 |
primitive gut | 2.61e-11 | 116 |
endoderm-derived structure | 5.54e-11 | 118 |
endoderm | 5.54e-11 | 118 |
presumptive endoderm | 5.54e-11 | 118 |
subdivision of digestive tract | 1.44e-09 | 114 |
small intestine | 4.20e-09 | 4 |
epithelium of mucosa | 2.02e-08 | 9 |
gastrointestinal system epithelium | 2.02e-08 | 9 |
intestinal epithelium | 2.02e-08 | 9 |
ileal mucosa | 2.68e-07 | 3 |
ileum | 2.68e-07 | 3 |
mucosa of small intestine | 2.68e-07 | 3 |
wall of small intestine | 2.68e-07 | 3 |