FFCP PHASE1:Mm9::chr9:123883407..123883426,-: Difference between revisions
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{{FFCP|EntrezGene=12768|HGNC=|MCL_coexpression_id=3|UniProt=P51675,Q8BMH9,Q8BVW4|association_with_transcript=98bp_to_ENSMUST00000026911,NM_009912,uc009sgy.2_5end|description=CAGE_peak_6_at_Ccr1_5end|id=chr9:123883407..123883426,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,7.47e-09,3;DOID:4045,7.47e-09,3|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.05e-10,32;UBERON:0005418,2.69e-08,5;UBERON:0002472,2.69e-08,5;UBERON:0008784,2.69e-08,5;UBERON:0006058,2.69e-08,5;UBERON:0004709,2.69e-08,5;UBERON:0002529,2.69e-08,5;UBERON:0010538,2.69e-08,5;UBERON:0005420,2.69e-08,5;UBERON:0010758,2.69e-08,5;UBERON:0000978,2.69e-08,5;UBERON:0002103,2.69e-08,5;UBERON:0000376,2.69e-08,5;UBERON:0000154,2.69e-08,5;UBERON:0010709,2.69e-08,5;UBERON:0005730,2.69e-08,5|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0.202475267389826,0,0,0.411343300817216,0,0.255129870453209,0.496454756004426,0.261199789138935,0.47997726838022,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,44.3643528581122,35.9414258480948,28.7938059185589,60.5878432671945,58.0588662214679,22.3334762394331,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0.257259436035947,1.71920063963254,0.515672092277442,0,0,0,0,0,0.899899717281399,3.9554654502679,1.4209602298922,0,0.768436610643109,0.103689612308478,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.255374676170375,0,0,0.182975287204819,0,0,0.56276261003168,0,0.294628585473668,0,0,0.681535739998656,0.226714680320357,0.869593466105033,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.45673551887624,1.29468941823586,0.890652834388949,0,0.608930956624282,0,0.150722640552623,0.470354828542819,0.125666591329675,0,1.73519228303894,0.884610551949874,3.88240439873782,1.76673214768315,3.87900202508178,0,0,0,0.766371165625774,0.359445373517761,0.599902730993408,0.635351135365324,0,0,0.125654352112864,0,0,0,0,0.407357455401265,3.6078021476927,0,0.210441855886474,0,0.459804208866946,0,0.150704817835715,0.340182495756639,0.384341160854549,0.0937017245597288,0.258703370739016,0.215567992932842,0,0,0,0,1.0447564995665,0.411564272815887,0.199034266818493,2.1066395619397,0.772043721344145,1.13665399758237,0,0,0,0.23674473558521,0.196764231747404,0,0,0,0.116765342367169,0.329119699826961,0.656669856316381,0.486412857275134,0.146199987425332,0.439100230582101,0.402619256281115,0,0,0,0.528901133327089,0.213288250535234,0,0.128867461322093,0.605050573870028,0.22237804384487,0.380451252225118,0.474529061544512,0.164698954724011,0.502670417600539,0.795825888164603,1.55971269695296,0,0.432276099749388,0.398282546508734,0.379335801906163,0.228497025219458,0,0,0,0.280543279561274,0.126473074248515,0,0,0,0,0,0,0,0.202860121388503,0.482354319504834,0.25462585178142,0,0.486405680325106,0,0,0,0,0,0,0,1.47802552133284,0.37898282354097,0.162964976442026,0.169745085775188,0.469380496577004,0.167506257441816,0.476087281772027,1.17080188714679,0.788175720530955,1.55025282754142,0.797273843287435,0.491589944147214,0.345369963731791,1.15719246865209,0,1.08781136763742,0.491764273019036,0.551873492609465,0,0.234423373184406,0,1.76729649043061,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0,0,0.307435147943927,0.516856586336442,1.81766864738753,1.06949213515416,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0.356737635204141,0,0.608929898229199,0.23467170806371,0,0.220528398054962,0.32977250588296,0.484393280087717,0.542816324353403,0.119372344003136,0.164140899745061,0.291480836629851,0.18542530201051,0.341741761595705,2.47664241555867,1.48155621895769,0,0.136694227721025,0.228778173206523,0.169978429993855,0.279902904647316,0.690999869022119,0,0.158167996790568,0.203319467126849,0.540026704109006,0,0.218362563746178,0.269728692769641,0.41326727862668,0.523511883968059,1.16653475962614,0,0,0,0,0,0.129159823477731,0,0.352071715937262,0.13020438484395,0,0,0.288030006257865,0,0,0.205421914329655,0,0.179026695667481,0.198681354781265,0,0.147689527174577,0,0.0762068066549998,0,0,0.384847366561318,0.116876902181569,0.226730383615211,0,0,0,0.386379188064381,0.750729901804728,0,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0.838452650511929,0.183843508450014,1.11123363900808,0.206035057238894,0.64183841918363,0.758091635291392,0.25347929989024,0.754505365544305,0.37456602987953,0.640251524048693,0.402048282689293,1.42888107384922,0.463537303779422,0.578727661391115,0.824171801606613,0.735994600671987,0.685738504770831,0.70990322463735,0.476872379894642,1.0174249164263,0.0941093804153306,0.676916863133412,0.365855945745545,0.526139422875686,0.814824683075171,0,0.593175090620871,0.394017929502254,0.818462086339379,0.154936841185966,0.964533054905707,0,1.16965804222704,1.28922632428979,2.10417165275728,2.42650561031467,2.78241402744506|short_description=p6@Ccr1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12768 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=P51675,Q8BMH9,Q8BVW4 | |||
|association_with_transcript=98bp_to_ENSMUST00000026911,NM_009912,uc009sgy.2_5end | |||
|cluster_id=chr9:123883407..123883426,- | |||
|description=CAGE_peak_6_at_Ccr1_5end | |||
|id=chr9:123883407..123883426,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,7.47e-09,3;DOID:4045,7.47e-09,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.05e-10,32;UBERON:0005418,2.69e-08,5;UBERON:0002472,2.69e-08,5;UBERON:0008784,2.69e-08,5;UBERON:0006058,2.69e-08,5;UBERON:0004709,2.69e-08,5;UBERON:0002529,2.69e-08,5;UBERON:0010538,2.69e-08,5;UBERON:0005420,2.69e-08,5;UBERON:0010758,2.69e-08,5;UBERON:0000978,2.69e-08,5;UBERON:0002103,2.69e-08,5;UBERON:0000376,2.69e-08,5;UBERON:0000154,2.69e-08,5;UBERON:0010709,2.69e-08,5;UBERON:0005730,2.69e-08,5 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0.202475267389826,0,0,0.411343300817216,0,0.255129870453209,0.496454756004426,0.261199789138935,0.47997726838022,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,44.3643528581122,35.9414258480948,28.7938059185589,60.5878432671945,58.0588662214679,22.3334762394331,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0.257259436035947,1.71920063963254,0.515672092277442,0,0,0,0,0,0.899899717281399,3.9554654502679,1.4209602298922,0,0.768436610643109,0.103689612308478,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.255374676170375,0,0,0.182975287204819,0,0,0.56276261003168,0,0.294628585473668,0,0,0.681535739998656,0.226714680320357,0.869593466105033,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.45673551887624,1.29468941823586,0.890652834388949,0,0.608930956624282,0,0.150722640552623,0.470354828542819,0.125666591329675,0,1.73519228303894,0.884610551949874,3.88240439873782,1.76673214768315,3.87900202508178,0,0,0,0.766371165625774,0.359445373517761,0.599902730993408,0.635351135365324,0,0,0.125654352112864,0,0,0,0,0.407357455401265,3.6078021476927,0,0.210441855886474,0,0.459804208866946,0,0.150704817835715,0.340182495756639,0.384341160854549,0.0937017245597288,0.258703370739016,0.215567992932842,0,0,0,0,1.0447564995665,0.411564272815887,0.199034266818493,2.1066395619397,0.772043721344145,1.13665399758237,0,0,0,0.23674473558521,0.196764231747404,0,0,0,0.116765342367169,0.329119699826961,0.656669856316381,0.486412857275134,0.146199987425332,0.439100230582101,0.402619256281115,0,0,0,0.528901133327089,0.213288250535234,0,0.128867461322093,0.605050573870028,0.22237804384487,0.380451252225118,0.474529061544512,0.164698954724011,0.502670417600539,0.795825888164603,1.55971269695296,0,0.432276099749388,0.398282546508734,0.379335801906163,0.228497025219458,0,0,0,0.280543279561274,0.126473074248515,0,0,0,0,0,0,0,0.202860121388503,0.482354319504834,0.25462585178142,0,0.486405680325106,0,0,0,0,0,0,0,1.47802552133284,0.37898282354097,0.162964976442026,0.169745085775188,0.469380496577004,0.167506257441816,0.476087281772027,1.17080188714679,0.788175720530955,1.55025282754142,0.797273843287435,0.491589944147214,0.345369963731791,1.15719246865209,0,1.08781136763742,0.491764273019036,0.551873492609465,0,0.234423373184406,0,1.76729649043061,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0,0,0.307435147943927,0.516856586336442,1.81766864738753,1.06949213515416,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0.356737635204141,0,0.608929898229199,0.23467170806371,0,0.220528398054962,0.32977250588296,0.484393280087717,0.542816324353403,0.119372344003136,0.164140899745061,0.291480836629851,0.18542530201051,0.341741761595705,2.47664241555867,1.48155621895769,0,0.136694227721025,0.228778173206523,0.169978429993855,0.279902904647316,0.690999869022119,0,0.158167996790568,0.203319467126849,0.540026704109006,0,0.218362563746178,0.269728692769641,0.41326727862668,0.523511883968059,1.16653475962614,0,0,0,0,0,0.129159823477731,0,0.352071715937262,0.13020438484395,0,0,0.288030006257865,0,0,0.205421914329655,0,0.179026695667481,0.198681354781265,0,0.147689527174577,0,0.0762068066549998,0,0,0.384847366561318,0.116876902181569,0.226730383615211,0,0,0,0.386379188064381,0.750729901804728,0,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0.838452650511929,0.183843508450014,1.11123363900808,0.206035057238894,0.64183841918363,0.758091635291392,0.25347929989024,0.754505365544305,0.37456602987953,0.640251524048693,0.402048282689293,1.42888107384922,0.463537303779422,0.578727661391115,0.824171801606613,0.735994600671987,0.685738504770831,0.70990322463735,0.476872379894642,1.0174249164263,0.0941093804153306,0.676916863133412,0.365855945745545,0.526139422875686,0.814824683075171,0,0.593175090620871,0.394017929502254,0.818462086339379,0.154936841185966,0.964533054905707,0,1.16965804222704,1.28922632428979,2.10417165275728,2.42650561031467,2.78241402744506 | |||
|short_description=p6@Ccr1 | |||
}} |
Latest revision as of 09:36, 26 September 2015
Short description: | p6@Ccr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Ccr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 98bp_to_ENSMUST00000026911, NM_009912, uc009sgy.2_5end |
EntrezGene: | Ccr1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 3.05e-10 | 32 |
hindlimb bud | 2.69e-08 | 5 |
stylopod | 2.69e-08 | 5 |
lower limb segment | 2.69e-08 | 5 |
multi-limb segment region | 2.69e-08 | 5 |
pelvic appendage | 2.69e-08 | 5 |
limb segment | 2.69e-08 | 5 |
paired limb/fin segment | 2.69e-08 | 5 |
pelvic appendage bud | 2.69e-08 | 5 |
subdivision of organism along appendicular axis | 2.69e-08 | 5 |
leg | 2.69e-08 | 5 |
hindlimb | 2.69e-08 | 5 |
hindlimb stylopod | 2.69e-08 | 5 |
posterior region of body | 2.69e-08 | 5 |
pelvic complex | 2.69e-08 | 5 |
hindlimb/pelvic fin field | 2.69e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 7.47e-09 | 3 |
muscle cancer | 7.47e-09 | 3 |