FFCP PHASE1:Mm9::chr14:75536110..75536132,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=18826|HGNC=|UniProt=Q61233|association_with_transcript=-6bp_to_ENSMUST00000145303_5end|description=CAGE_peak_5_at_Lcp1_5end|id=chr14:75536110..75536132,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000464!2.95e-14!57;UBERON:0004921!6.20e-12!126;UBERON:0004185!6.20e-12!126;UBERON:0005153!6.26e-12!17;UBERON:0004119!1.49e-11!130;UBERON:0000925!1.49e-11!130;UBERON:0006595!1.49e-11!130;UBERON:0005178!1.49e-11!17;UBERON:0005181!1.49e-11!17;UBERON:0002224!1.49e-11!17;UBERON:0000915!1.49e-11!17;UBERON:0008947!1.49e-11!17;UBERON:0003258!1.49e-11!17;UBERON:0002048!1.82e-11!14;UBERON:0000117!1.82e-11!14;UBERON:0000171!1.82e-11!14;UBERON:0000170!1.82e-11!14;UBERON:0005597!1.82e-11!14;UBERON:0000118!1.82e-11!14;UBERON:0001007!1.96e-11!128;UBERON:0001555!1.96e-11!128;UBERON:0007026!1.96e-11!128;UBERON:0000077!2.17e-11!97;UBERON:0005409!4.21e-11!59;UBERON:0001264!2.91e-10!12;UBERON:0003922!2.91e-10!12;UBERON:0002114!2.91e-10!12;UBERON:0003923!2.91e-10!12;UBERON:0003924!2.91e-10!12;UBERON:0003921!2.91e-10!12;UBERON:0001041!1.04e-09!92;UBERON:0002108!3.68e-09!16;UBERON:0001045!3.82e-09!13;UBERON:0002075!3.74e-08!19;UBERON:0000466!6.97e-08!79|ontology_enrichment_uberon_v019_2=UBERON:0002048,7.44e-15,14;UBERON:0000117,7.44e-15,14;UBERON:0000171,7.44e-15,14;UBERON:0000170,7.44e-15,14;UBERON:0005597,7.44e-15,14;UBERON:0000118,7.44e-15,14;UBERON:0005153,7.87e-15,17;UBERON:0001264,2.43e-12,12;UBERON:0005157,2.83e-12,20;UBERON:0005178,6.67e-12,17;UBERON:0005181,6.67e-12,17;UBERON:0002224,6.67e-12,17;UBERON:0000915,6.67e-12,17;UBERON:0008947,6.67e-12,17;UBERON:0003258,6.67e-12,17;UBERON:0005177,3.04e-10,79;UBERON:0000310,6.49e-10,6;UBERON:0001443,6.49e-10,6;UBERON:0002100,1.61e-09,90;UBERON:0002075,2.11e-09,19;UBERON:0000945,8.03e-09,16;UBERON:0010039,8.03e-09,16;UBERON:0002553,1.43e-08,39;UBERON:0003886,2.20e-07,38;UBERON:0010147,8.43e-07,2;UBERON:0003937,8.43e-07,2;UBERON:0005399,8.43e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0.215471232685889,0.380046838912748,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0.649473123033642,0,0.505524445014783,0.34255163915718,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,2.73695335342205,10.867078612648,4.62972082950243,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0.928946687441754,1.15980715189884,0.403367049246685,0.667134131534611,0.570676878337677,0,0,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,1.47802552133284,0.189491411770485,1.30371981153621,2.37643120085263,4.22442446919304,3.51763140627813,3.57065461329021,0.780534591431195,1.57635144106191,1.10732344824387,0.478364305972461,0.81931657357869,1.20879487306127,1.15719246865209,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0.178065603667255,0,2.14461159864296,10.619611067197,0.485561272309963,0.302323556964751,1.69744571780308,1.18120757152309,0.307435147943927,0.258428293168221,3.63533729477506,1.42598951353889,6.63677191665214,4.21674434299995,5.15677716240934,0,0,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0,0.23467170806371,0,22.0528398054962,0,0,0,0,0,0.291480836629851,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,1.90934123603023,0.316335993581135,5.08298667817122,2.80813886136683,3.97267762427491,4.14888871117737,2.42755823492677,3.2234847732881,2.6175594198403,0.388844919875379,8.69875038321696,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0.906921534460845,0,0,0,13.9096507703177,0.563047426353546,3.11357761254351,0.214368379079066,31.5990425542279,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0,0.280924522409647,0.256100609619477,0.0574354689556133,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0.685738504770831,0,0,0.436039249896986,0.188218760830661,0.169229215783353,0.365855945745545,0.263069711437843,0.814824683075171,0,0.237270036248348,0.197008964751127,0,0.464810523557898,0.771626443924566,0,0.233931608445408,0.429742108096597,0.191288332068843,0,0|short_description=p5@Lcp1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18826 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q61233 | |||
|association_with_transcript=-6bp_to_ENSMUST00000145303_5end | |||
|cluster_id=chr14:75536110..75536132,+ | |||
|description=CAGE_peak_5_at_Lcp1_5end | |||
|id=chr14:75536110..75536132,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000464!2.95e-14!57;UBERON:0004921!6.20e-12!126;UBERON:0004185!6.20e-12!126;UBERON:0005153!6.26e-12!17;UBERON:0004119!1.49e-11!130;UBERON:0000925!1.49e-11!130;UBERON:0006595!1.49e-11!130;UBERON:0005178!1.49e-11!17;UBERON:0005181!1.49e-11!17;UBERON:0002224!1.49e-11!17;UBERON:0000915!1.49e-11!17;UBERON:0008947!1.49e-11!17;UBERON:0003258!1.49e-11!17;UBERON:0002048!1.82e-11!14;UBERON:0000117!1.82e-11!14;UBERON:0000171!1.82e-11!14;UBERON:0000170!1.82e-11!14;UBERON:0005597!1.82e-11!14;UBERON:0000118!1.82e-11!14;UBERON:0001007!1.96e-11!128;UBERON:0001555!1.96e-11!128;UBERON:0007026!1.96e-11!128;UBERON:0000077!2.17e-11!97;UBERON:0005409!4.21e-11!59;UBERON:0001264!2.91e-10!12;UBERON:0003922!2.91e-10!12;UBERON:0002114!2.91e-10!12;UBERON:0003923!2.91e-10!12;UBERON:0003924!2.91e-10!12;UBERON:0003921!2.91e-10!12;UBERON:0001041!1.04e-09!92;UBERON:0002108!3.68e-09!16;UBERON:0001045!3.82e-09!13;UBERON:0002075!3.74e-08!19;UBERON:0000466!6.97e-08!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,7.44e-15,14;UBERON:0000117,7.44e-15,14;UBERON:0000171,7.44e-15,14;UBERON:0000170,7.44e-15,14;UBERON:0005597,7.44e-15,14;UBERON:0000118,7.44e-15,14;UBERON:0005153,7.87e-15,17;UBERON:0001264,2.43e-12,12;UBERON:0005157,2.83e-12,20;UBERON:0005178,6.67e-12,17;UBERON:0005181,6.67e-12,17;UBERON:0002224,6.67e-12,17;UBERON:0000915,6.67e-12,17;UBERON:0008947,6.67e-12,17;UBERON:0003258,6.67e-12,17;UBERON:0005177,3.04e-10,79;UBERON:0000310,6.49e-10,6;UBERON:0001443,6.49e-10,6;UBERON:0002100,1.61e-09,90;UBERON:0002075,2.11e-09,19;UBERON:0000945,8.03e-09,16;UBERON:0010039,8.03e-09,16;UBERON:0002553,1.43e-08,39;UBERON:0003886,2.20e-07,38;UBERON:0010147,8.43e-07,2;UBERON:0003937,8.43e-07,2;UBERON:0005399,8.43e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0.215471232685889,0.380046838912748,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0.649473123033642,0,0.505524445014783,0.34255163915718,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,2.73695335342205,10.867078612648,4.62972082950243,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0.928946687441754,1.15980715189884,0.403367049246685,0.667134131534611,0.570676878337677,0,0,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,1.47802552133284,0.189491411770485,1.30371981153621,2.37643120085263,4.22442446919304,3.51763140627813,3.57065461329021,0.780534591431195,1.57635144106191,1.10732344824387,0.478364305972461,0.81931657357869,1.20879487306127,1.15719246865209,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0.178065603667255,0,2.14461159864296,10.619611067197,0.485561272309963,0.302323556964751,1.69744571780308,1.18120757152309,0.307435147943927,0.258428293168221,3.63533729477506,1.42598951353889,6.63677191665214,4.21674434299995,5.15677716240934,0,0,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0,0.23467170806371,0,22.0528398054962,0,0,0,0,0,0.291480836629851,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,1.90934123603023,0.316335993581135,5.08298667817122,2.80813886136683,3.97267762427491,4.14888871117737,2.42755823492677,3.2234847732881,2.6175594198403,0.388844919875379,8.69875038321696,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0.906921534460845,0,0,0,13.9096507703177,0.563047426353546,3.11357761254351,0.214368379079066,31.5990425542279,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0,0.280924522409647,0.256100609619477,0.0574354689556133,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0.685738504770831,0,0,0.436039249896986,0.188218760830661,0.169229215783353,0.365855945745545,0.263069711437843,0.814824683075171,0,0.237270036248348,0.197008964751127,0,0.464810523557898,0.771626443924566,0,0.233931608445408,0.429742108096597,0.191288332068843,0,0 | |||
|short_description=p5@Lcp1 | |||
}} |
Latest revision as of 09:45, 26 September 2015
Short description: | p5@Lcp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Lcp1_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENSMUST00000145303_5end |
EntrezGene: | Lcp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 7.44e-15 | 14 |
respiratory tube | 7.44e-15 | 14 |
respiration organ | 7.44e-15 | 14 |
pair of lungs | 7.44e-15 | 14 |
lung primordium | 7.44e-15 | 14 |
lung bud | 7.44e-15 | 14 |
epithelial bud | 7.87e-15 | 17 |
pancreas | 2.43e-12 | 12 |
epithelial fold | 2.83e-12 | 20 |
thoracic cavity element | 6.67e-12 | 17 |
thoracic segment organ | 6.67e-12 | 17 |
thoracic cavity | 6.67e-12 | 17 |
thoracic segment of trunk | 6.67e-12 | 17 |
respiratory primordium | 6.67e-12 | 17 |
endoderm of foregut | 6.67e-12 | 17 |
trunk region element | 3.04e-10 | 79 |
breast | 6.49e-10 | 6 |
chest | 6.49e-10 | 6 |
trunk | 1.61e-09 | 90 |
viscus | 2.11e-09 | 19 |
stomach | 8.03e-09 | 16 |
food storage organ | 8.03e-09 | 16 |
anatomical cavity | 1.43e-08 | 39 |
body cavity precursor | 2.20e-07 | 38 |
male accessory sex gland | 8.43e-07 | 2 |
sex gland | 8.43e-07 | 2 |
male reproductive gland | 8.43e-07 | 2 |