FFCP PHASE1:Mm9::chr17:35457474..35457502,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15006 | |EntrezGene=15006 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=O19441,E9PX63,Q0WXH4 | |UniProt=O19441,E9PX63,Q0WXH4 | ||
|association_with_transcript=0bp_to_ENSMUST00000073208,ENSMUST00000105041,NM_010390,uc008chj.2,uc012ard.1,uc012are.1_5end | |association_with_transcript=0bp_to_ENSMUST00000073208,ENSMUST00000105041,NM_010390,uc008chj.2,uc012ard.1,uc012are.1_5end | ||
|cluster_id=chr17:35457474..35457502,+ | |||
|description=CAGE_peak_1_at_H2-Q1_5end | |description=CAGE_peak_1_at_H2-Q1_5end | ||
|id=chr17:35457474..35457502,+ | |id=chr17:35457474..35457502,+ | ||
|ontology_enrichment_celltype=CL:0002563!4.59e-08!9;CL:0002251!4.59e-08!9 | |ontology_enrichment_celltype=CL:0002563!4.59e-08!9;CL:0002251!4.59e-08!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.19e-14,9;CL:0002251,3.19e-14,9;CL:0000066,1.13e-13,25;CL:0000223,3.83e-11,20;CL:0000239,6.44e-11,6;CL:0000677,6.44e-11,6;CL:0000584,6.44e-11,6;CL:0000075,3.24e-09,7;CL:0002076,9.37e-08,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.88e-14!43;UBERON:0000344!8.69e-13!15;UBERON:0001242!2.27e-11!13;UBERON:0000060!2.27e-11!13;UBERON:0001262!2.27e-11!13;UBERON:0004786!2.27e-11!13;UBERON:0005409!4.69e-11!59;UBERON:0001007!8.98e-10!128;UBERON:0001555!8.98e-10!128;UBERON:0007026!8.98e-10!128;UBERON:0004119!2.66e-09!130;UBERON:0000925!2.66e-09!130;UBERON:0006595!2.66e-09!130;UBERON:0004921!7.29e-09!126;UBERON:0004185!7.29e-09!126;UBERON:0003350!4.59e-08!9;UBERON:0004808!4.59e-08!9;UBERON:0001277!4.59e-08!9 | |ontology_enrichment_uberon=UBERON:0000160!4.88e-14!43;UBERON:0000344!8.69e-13!15;UBERON:0001242!2.27e-11!13;UBERON:0000060!2.27e-11!13;UBERON:0001262!2.27e-11!13;UBERON:0004786!2.27e-11!13;UBERON:0005409!4.69e-11!59;UBERON:0001007!8.98e-10!128;UBERON:0001555!8.98e-10!128;UBERON:0007026!8.98e-10!128;UBERON:0004119!2.66e-09!130;UBERON:0000925!2.66e-09!130;UBERON:0006595!2.66e-09!130;UBERON:0004921!7.29e-09!126;UBERON:0004185!7.29e-09!126;UBERON:0003350!4.59e-08!9;UBERON:0004808!4.59e-08!9;UBERON:0001277!4.59e-08!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.35e-39,31;UBERON:0005409,3.96e-27,47;UBERON:0000344,2.02e-23,15;UBERON:0001242,1.18e-20,13;UBERON:0001262,1.18e-20,13;UBERON:0004786,1.18e-20,13;UBERON:0001007,1.51e-16,116;UBERON:0001555,1.51e-16,116;UBERON:0007026,1.51e-16,116;UBERON:0004119,4.39e-16,118;UBERON:0000925,4.39e-16,118;UBERON:0006595,4.39e-16,118;UBERON:0004921,8.27e-15,114;UBERON:0003350,3.19e-14,9;UBERON:0004808,3.19e-14,9;UBERON:0001277,3.19e-14,9;UBERON:0004923,4.29e-13,24;UBERON:0000485,2.83e-11,11;UBERON:0002108,9.10e-08,4 | |||
|phase1_expression=0,161.226638329385,150.149748998547,222.916123733134,349.62521950255,2.68606835059024,1.86890112476421,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9593862462659,13.9939661450974,105.658681397164,55.9990595006797,43.9561314679214,45.225573830617,72.0806171113402,19.7340154483221,0,0,0,1.1554064790051,5.15327400611326,2.04169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768436610643109,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0.558365998002762,0,0,0.294628585473668,0,0,0,0,0,3.44169550792555,55.0776780303278,1.07940638327563,1.29955283489534,1.79210754838934,2.52799956237153,0,0,0,0,0,0,0,0,0,0,14.6155366040397,0,0,0.346970653532272,0,0.230615497256059,0,0,0.376999773989026,0,0,0,0,0,0,7.45567044872489,0.292780797011547,0.209446706813455,71.0170613479884,0,0,0,0.599162557619291,0,0,0.347648640384553,0.255715457330331,0.20778804455956,0.162241263067758,0,0,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,258.057069510346,106.309127798745,0.213288250535234,0,0.902072229254653,3.83198696784351,7.78323153457046,20.5443676201564,97.2784576166249,24.7048432086016,31.1655658912334,29.4455578620903,27.6849003709151,79.9949273702257,73.7030750072707,89.4144316912109,0,0,0,0,0,0,0,0,0,0,4.15033677922008,0,0,0.224862112384854,0.405720242777006,0,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0.372140947668503,5.61667811606209,25.7630455506054,18.6573310062789,11.0962009913574,0,0.189491411770485,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0.318909537314974,0,0.345369963731791,0,0,0,0,0,1.28440471990234,0.703270119553219,0,0,0,0,0,0,0,0.283076530788832,0.404810701674894,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,12.9214146584111,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0.32977250588296,0,0,0,0.164140899745061,72.5787283208328,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0.216010681643603,0.209088296014469,1.74690050996942,0,0.41326727862668,0,13.2207272757629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0.295379054349154,0.201932899896295,0.457240839929999,0.100826185136841,0.0974578807397524,0.384847366561318,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0.343706364687375,0,0,0.675022500231806,0,0.453142408984205,0.51776031175182,0,0,0.170733605754134,0,0,0,0.44449345560323,0.824140228955577,0.962757628775446,1.26348605881899,0.50695859978048,0.943131706930381,0.749132059759059,1.15245274328765,1.09127391015665,0.476293691283074,0.811190281613988,0.77163688185482,1.64834360321323,0.441596760403192,0.342869252385415,0.532427418478012,0.953744759789284,0.290692833264657,0.658765662907314,0.930760686808441,0.548783918618318,0.789209134313529,0.814824683075171,1.68342681497322,0.593175090620871,0.886540341380071,0.818462086339379,0.464810523557898,0.192906610981141,0,2.10538447600868,1.07435527024149,0,0,0 | |phase1_expression=0,161.226638329385,150.149748998547,222.916123733134,349.62521950255,2.68606835059024,1.86890112476421,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9593862462659,13.9939661450974,105.658681397164,55.9990595006797,43.9561314679214,45.225573830617,72.0806171113402,19.7340154483221,0,0,0,1.1554064790051,5.15327400611326,2.04169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768436610643109,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0.558365998002762,0,0,0.294628585473668,0,0,0,0,0,3.44169550792555,55.0776780303278,1.07940638327563,1.29955283489534,1.79210754838934,2.52799956237153,0,0,0,0,0,0,0,0,0,0,14.6155366040397,0,0,0.346970653532272,0,0.230615497256059,0,0,0.376999773989026,0,0,0,0,0,0,7.45567044872489,0.292780797011547,0.209446706813455,71.0170613479884,0,0,0,0.599162557619291,0,0,0.347648640384553,0.255715457330331,0.20778804455956,0.162241263067758,0,0,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,258.057069510346,106.309127798745,0.213288250535234,0,0.902072229254653,3.83198696784351,7.78323153457046,20.5443676201564,97.2784576166249,24.7048432086016,31.1655658912334,29.4455578620903,27.6849003709151,79.9949273702257,73.7030750072707,89.4144316912109,0,0,0,0,0,0,0,0,0,0,4.15033677922008,0,0,0.224862112384854,0.405720242777006,0,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0.372140947668503,5.61667811606209,25.7630455506054,18.6573310062789,11.0962009913574,0,0.189491411770485,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0.318909537314974,0,0.345369963731791,0,0,0,0,0,1.28440471990234,0.703270119553219,0,0,0,0,0,0,0,0.283076530788832,0.404810701674894,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,12.9214146584111,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0.32977250588296,0,0,0,0.164140899745061,72.5787283208328,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0.216010681643603,0.209088296014469,1.74690050996942,0,0.41326727862668,0,13.2207272757629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0.295379054349154,0.201932899896295,0.457240839929999,0.100826185136841,0.0974578807397524,0.384847366561318,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0.343706364687375,0,0,0.675022500231806,0,0.453142408984205,0.51776031175182,0,0,0.170733605754134,0,0,0,0.44449345560323,0.824140228955577,0.962757628775446,1.26348605881899,0.50695859978048,0.943131706930381,0.749132059759059,1.15245274328765,1.09127391015665,0.476293691283074,0.811190281613988,0.77163688185482,1.64834360321323,0.441596760403192,0.342869252385415,0.532427418478012,0.953744759789284,0.290692833264657,0.658765662907314,0.930760686808441,0.548783918618318,0.789209134313529,0.814824683075171,1.68342681497322,0.593175090620871,0.886540341380071,0.818462086339379,0.464810523557898,0.192906610981141,0,2.10538447600868,1.07435527024149,0,0,0 | ||
|short_description=p1@H2-Q1 | |short_description=p1@H2-Q1 | ||
}} | }} |
Latest revision as of 10:12, 26 September 2015
Short description: | p1@H2-Q1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_H2-Q1_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 0bp_to_ENSMUST00000073208, ENSMUST00000105041, NM_010390, uc008chj.2, uc012ard.1, uc012are.1_5end |
EntrezGene: | H2-Q1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.19e-14 | 9 |
epithelial cell of alimentary canal | 3.19e-14 | 9 |
epithelial cell | 1.13e-13 | 25 |
endodermal cell | 3.83e-11 | 20 |
brush border epithelial cell | 6.44e-11 | 6 |
gut absorptive cell | 6.44e-11 | 6 |
enterocyte | 6.44e-11 | 6 |
columnar/cuboidal epithelial cell | 3.24e-09 | 7 |
endo-epithelial cell | 9.37e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.35e-39 | 31 |
gastrointestinal system | 3.96e-27 | 47 |
mucosa | 2.02e-23 | 15 |
intestinal mucosa | 1.18e-20 | 13 |
wall of intestine | 1.18e-20 | 13 |
gastrointestinal system mucosa | 1.18e-20 | 13 |
digestive system | 1.51e-16 | 116 |
digestive tract | 1.51e-16 | 116 |
primitive gut | 1.51e-16 | 116 |
endoderm-derived structure | 4.39e-16 | 118 |
endoderm | 4.39e-16 | 118 |
presumptive endoderm | 4.39e-16 | 118 |
subdivision of digestive tract | 8.27e-15 | 114 |
epithelium of mucosa | 3.19e-14 | 9 |
gastrointestinal system epithelium | 3.19e-14 | 9 |
intestinal epithelium | 3.19e-14 | 9 |
organ component layer | 4.29e-13 | 24 |
simple columnar epithelium | 2.83e-11 | 11 |
small intestine | 9.10e-08 | 4 |