FFCP PHASE1:Mm9::chr14:99698164..99698208,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12224 | |EntrezGene=12224 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9Z0Z7 | |UniProt=Q9Z0Z7 | ||
|association_with_transcript=254bp_to_ENSMUST00000005279,NM_009769,uc007uvf.1,uc007uvg.1_5end | |association_with_transcript=254bp_to_ENSMUST00000005279,NM_009769,uc007uvf.1,uc007uvg.1_5end | ||
|cluster_id=chr14:99698164..99698208,+ | |||
|description=CAGE_peak_2_at_Klf5_5end | |description=CAGE_peak_2_at_Klf5_5end | ||
|id=chr14:99698164..99698208,+ | |id=chr14:99698164..99698208,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.75e-09,9;CL:0002251,6.75e-09,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!5.37e-10!59;UBERON:0000344!2.38e-09!15;UBERON:0000160!4.25e-08!43;UBERON:0001242!5.09e-08!13;UBERON:0000060!5.09e-08!13;UBERON:0001262!5.09e-08!13;UBERON:0004786!5.09e-08!13;UBERON:0004923!1.58e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.09e-15,15;UBERON:0000160,6.86e-14,31;UBERON:0005409,1.02e-12,47;UBERON:0004923,2.83e-12,24;UBERON:0001242,3.56e-12,13;UBERON:0001262,3.56e-12,13;UBERON:0004786,3.56e-12,13;UBERON:0003350,6.75e-09,9;UBERON:0004808,6.75e-09,9;UBERON:0001277,6.75e-09,9;UBERON:0000485,4.34e-07,11 | |||
|phase1_expression=0.480446541314382,0.348975407639361,0.909998478779072,1.20985684522732,2.50447864973174,1.34303417529512,2.10251376535973,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,3.03985603307473,1.83527424853736,0,0.86152399231815,1.72376986148711,2.66032787238923,2.01624103807945,1.10865255327652,0,0,0,1.44425809875637,1.49611180822643,1.02084678131185,0.418531630736908,0,0.523523743973798,0.588231488031014,0.683045484958446,0.485510353031154,0,0,0,13.3006528539167,0,0.659058548203415,0.194429899074283,8.39918529752175,0,0,0,0,0,0,0,0,0,0.633831403506179,4.06613438482959,8.00365316500025,0.449949858640699,0,0,1.49800055259202,0,0,0,0,0,0.883474163806454,0,0,0,0,0,0,0,0.640413505216868,0,0,0,0.30559649555362,0,0.142371680799103,0,0.302904773332736,0.377857800533928,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.649473123033642,1.77351905832569,0.505524445014783,0.79928715803342,0,0,0.346970653532272,0,0.230615497256059,0.150722640552623,0.352766121407114,0.125666591329675,4.44950941921873,0,0,0.323533699894818,0.220841518460394,0,11.1835056730873,0.292780797011547,0.209446706813455,4.59822699375465,0,0,0,0,0,0,0.347648640384553,0.255715457330331,0,0,0.203678727700633,0.373220911830279,0,0,0.130120442962704,0,0,0.150704817835715,0.476255494059295,0,0,0.517406741478031,0,0,0.175951124163949,1.09597866213787,0,1.0447564995665,0.823128545631774,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0.991256348951394,3.70230793328962,0.426576501070468,0.232236671860439,0.644337306610467,1.21010114774006,0.444756087689741,0.380451252225118,2.84717436926707,0.494096864172033,0.251335208800269,0.596869416123452,0.974820435595601,0.898819408654221,2.59365659849633,1.59313018603494,0.569003702859245,0,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0.339490171550376,0,0.167506257441816,0.952174563544055,0.585400943573396,0.315270288212382,0.44292937929755,0,0.163863314715738,0,0.289298117163023,0,0,0.491764273019036,0,0.321101179975584,0.117211686592203,0.327869890753351,0,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0,0,0.283880170416537,0.178065603667255,0.651547837414304,0.494910368917606,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0.776152102696527,1.07168517515796,1.41872186913819,1.96205699362278,0.822745103010605,1.522324745573,1.64270195644597,0,0,1.15420377059036,4.19807509409354,0.844380948994182,0.835606408021955,0.492422699235184,0.291480836629851,0,0,0.412773735926445,0.185194527369712,0.188368457004691,0.27338845544205,0,0,0.139951452323658,0,1.90934123603023,0.316335993581135,1.21991680276109,0.972048067396211,0.418176592028937,0.218362563746178,0.404593039154462,1.1571483801547,0.26175594198403,2.59229946583586,0.621339313086926,0.56369293868419,0.299033092087958,0.165458490457098,0.194451188344048,0.258319646955462,0,0.234714477291508,0,0.209718688851422,0,0.288030006257865,0,0.405450430580328,0.102710957164827,0.25984164595559,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,2.26730383615211,2.88581739386284,0.807424709485281,1.17519231454855,0.965947970160952,1.31377732815827,1.28206136987086,1.50057865355346,0,0,0.920650473014354,0,0.68741272937475,0,0.755393897389701,0.675022500231806,0,0.453142408984205,0,0,0,0.170733605754134,1.21553358534147,0.419226325255965,0,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0.188626341386076,0.468207537349412,0.576226371643824,0.229741875822453,0.952587382566147,0,0.964546102318525,0,0.294397840268795,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.376437521661322,0.423073039458382,0.73171189149109,0.526139422875686,0,0,0.474540072496697,0.29551344712669,0.409231043169689,0.154936841185966,0.578719832943424,0.249810577937946,0.467863216890817,1.93383948643468,1.53030665655075,0.220591419119515,0 | |phase1_expression=0.480446541314382,0.348975407639361,0.909998478779072,1.20985684522732,2.50447864973174,1.34303417529512,2.10251376535973,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,3.03985603307473,1.83527424853736,0,0.86152399231815,1.72376986148711,2.66032787238923,2.01624103807945,1.10865255327652,0,0,0,1.44425809875637,1.49611180822643,1.02084678131185,0.418531630736908,0,0.523523743973798,0.588231488031014,0.683045484958446,0.485510353031154,0,0,0,13.3006528539167,0,0.659058548203415,0.194429899074283,8.39918529752175,0,0,0,0,0,0,0,0,0,0.633831403506179,4.06613438482959,8.00365316500025,0.449949858640699,0,0,1.49800055259202,0,0,0,0,0,0.883474163806454,0,0,0,0,0,0,0,0.640413505216868,0,0,0,0.30559649555362,0,0.142371680799103,0,0.302904773332736,0.377857800533928,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.649473123033642,1.77351905832569,0.505524445014783,0.79928715803342,0,0,0.346970653532272,0,0.230615497256059,0.150722640552623,0.352766121407114,0.125666591329675,4.44950941921873,0,0,0.323533699894818,0.220841518460394,0,11.1835056730873,0.292780797011547,0.209446706813455,4.59822699375465,0,0,0,0,0,0,0.347648640384553,0.255715457330331,0,0,0.203678727700633,0.373220911830279,0,0,0.130120442962704,0,0,0.150704817835715,0.476255494059295,0,0,0.517406741478031,0,0,0.175951124163949,1.09597866213787,0,1.0447564995665,0.823128545631774,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0.991256348951394,3.70230793328962,0.426576501070468,0.232236671860439,0.644337306610467,1.21010114774006,0.444756087689741,0.380451252225118,2.84717436926707,0.494096864172033,0.251335208800269,0.596869416123452,0.974820435595601,0.898819408654221,2.59365659849633,1.59313018603494,0.569003702859245,0,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0.339490171550376,0,0.167506257441816,0.952174563544055,0.585400943573396,0.315270288212382,0.44292937929755,0,0.163863314715738,0,0.289298117163023,0,0,0.491764273019036,0,0.321101179975584,0.117211686592203,0.327869890753351,0,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0,0,0.283880170416537,0.178065603667255,0.651547837414304,0.494910368917606,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0.776152102696527,1.07168517515796,1.41872186913819,1.96205699362278,0.822745103010605,1.522324745573,1.64270195644597,0,0,1.15420377059036,4.19807509409354,0.844380948994182,0.835606408021955,0.492422699235184,0.291480836629851,0,0,0.412773735926445,0.185194527369712,0.188368457004691,0.27338845544205,0,0,0.139951452323658,0,1.90934123603023,0.316335993581135,1.21991680276109,0.972048067396211,0.418176592028937,0.218362563746178,0.404593039154462,1.1571483801547,0.26175594198403,2.59229946583586,0.621339313086926,0.56369293868419,0.299033092087958,0.165458490457098,0.194451188344048,0.258319646955462,0,0.234714477291508,0,0.209718688851422,0,0.288030006257865,0,0.405450430580328,0.102710957164827,0.25984164595559,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,2.26730383615211,2.88581739386284,0.807424709485281,1.17519231454855,0.965947970160952,1.31377732815827,1.28206136987086,1.50057865355346,0,0,0.920650473014354,0,0.68741272937475,0,0.755393897389701,0.675022500231806,0,0.453142408984205,0,0,0,0.170733605754134,1.21553358534147,0.419226325255965,0,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0.188626341386076,0.468207537349412,0.576226371643824,0.229741875822453,0.952587382566147,0,0.964546102318525,0,0.294397840268795,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.376437521661322,0.423073039458382,0.73171189149109,0.526139422875686,0,0,0.474540072496697,0.29551344712669,0.409231043169689,0.154936841185966,0.578719832943424,0.249810577937946,0.467863216890817,1.93383948643468,1.53030665655075,0.220591419119515,0 | ||
|short_description=p2@Klf5 | |short_description=p2@Klf5 | ||
}} | }} |
Latest revision as of 11:56, 26 September 2015
Short description: | p2@Klf5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Klf5_5end |
Coexpression cluster: | NA |
Association with transcript: | 254bp_to_ENSMUST00000005279, NM_009769, uc007uvf.1, uc007uvg.1_5end |
EntrezGene: | Klf5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.75e-09 | 9 |
epithelial cell of alimentary canal | 6.75e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.09e-15 | 15 |
intestine | 6.86e-14 | 31 |
gastrointestinal system | 1.02e-12 | 47 |
organ component layer | 2.83e-12 | 24 |
intestinal mucosa | 3.56e-12 | 13 |
wall of intestine | 3.56e-12 | 13 |
gastrointestinal system mucosa | 3.56e-12 | 13 |
epithelium of mucosa | 6.75e-09 | 9 |
gastrointestinal system epithelium | 6.75e-09 | 9 |
intestinal epithelium | 6.75e-09 | 9 |
simple columnar epithelium | 4.34e-07 | 11 |