FFCP PHASE1:Mm9::chr12:37968255..37968270,+: Difference between revisions
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|id=chr12:37968255..37968270,+
|short_description=p8@Agmo
|description=CAGE_peak_8_at_Agmo_5end
|association_with_transcript=27bp_to_ENSMUST00000049874_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=319660 | |EntrezGene=319660 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=217 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BS35 | |UniProt=Q8BS35 | ||
|association_with_transcript=27bp_to_ENSMUST00000049874_5end | |||
|cluster_id=chr12:37968255..37968270,+ | |||
|description=CAGE_peak_8_at_Agmo_5end | |||
|id=chr12:37968255..37968270,+ | |||
|ontology_enrichment_celltype=CL:0002563!4.64e-09!9;CL:0002251!4.64e-09!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.70e-12,9;CL:0002251,3.70e-12,9;CL:0002250,3.56e-10,3;CL:0002076,4.77e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.62e-16!43;UBERON:0000344!3.45e-12!15;UBERON:0001007!1.76e-10!128;UBERON:0001555!1.76e-10!128;UBERON:0007026!1.76e-10!128;UBERON:0005409!1.89e-10!59;UBERON:0001242!1.96e-10!13;UBERON:0000060!1.96e-10!13;UBERON:0001262!1.96e-10!13;UBERON:0004786!1.96e-10!13;UBERON:0004119!4.61e-10!130;UBERON:0000925!4.61e-10!130;UBERON:0006595!4.61e-10!130;UBERON:0004921!2.05e-09!126;UBERON:0004185!2.05e-09!126;UBERON:0003350!4.64e-09!9;UBERON:0004808!4.64e-09!9;UBERON:0001277!4.64e-09!9;UBERON:0000485!6.31e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.39e-33,31;UBERON:0005409,8.25e-21,47;UBERON:0000344,4.57e-19,15;UBERON:0001242,1.39e-14,13;UBERON:0001262,1.39e-14,13;UBERON:0004786,1.39e-14,13;UBERON:0003350,3.70e-12,9;UBERON:0004808,3.70e-12,9;UBERON:0001277,3.70e-12,9;UBERON:0004923,3.05e-11,24;UBERON:0001007,3.77e-11,116;UBERON:0001555,3.77e-11,116;UBERON:0007026,3.77e-11,116;UBERON:0004119,7.02e-11,118;UBERON:0000925,7.02e-11,118;UBERON:0006595,7.02e-11,118;UBERON:0000485,7.75e-10,11;UBERON:0004921,3.22e-09,114 | |||
|phase1_expression=0,1.39590163055744,0.909998478779072,6.95667686005709,2.00358291978539,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,1.11994695955385,1.37645568640302,1.14846392823004,0.86152399231815,0,1.90023419456374,0.252030129759931,0,0,0,0,2.59966457776147,2.49351968037739,3.67504841272264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.289864488701678,2.58127163094416,0,0,0,0.448026887097336,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0,0,0,0,0.117588707135705,0.125666591329675,0,5.92857363371638,0,0,0,0,0,0,0,3.32094171771169,0.11981512450592,0,0,0,0,0,0,0,0.20778804455956,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.439100230582101,0.134206418760372,0,0,12.2254949704005,1.05780226665418,0,0,0.257734922644187,0,0.22237804384487,0.760902504450237,7.59246498471219,2.14108641141214,2.76468729680296,1.79060824837036,1.75467678407208,7.19055526923377,5.61958929674205,4.77939055810481,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0.592905254174298,0,0,0,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0.549122826376163,4.31304619582064,1.86070473834252,0.624075346229121,0,0,0.482443521363367,0.923765950833023,0,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0,0.827810238914197,0,0,0,0.252470927204373,0,0,0,0,0,0,0.404810701674894,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0.712994756769443,0.632073515871632,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0,0.164140899745061,7.57850175237612,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,3.51100472824754,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.17230640686684,0.476293691283074,0.115884325944855,0,0,0.294397840268795,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0.271608227691724,0,0,0,1.22769312950907,0,0,0,0.233931608445408,0.859484216193193,0.382576664137687,0.220591419119515,0.463735671240843 | |phase1_expression=0,1.39590163055744,0.909998478779072,6.95667686005709,2.00358291978539,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,1.11994695955385,1.37645568640302,1.14846392823004,0.86152399231815,0,1.90023419456374,0.252030129759931,0,0,0,0,2.59966457776147,2.49351968037739,3.67504841272264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.289864488701678,2.58127163094416,0,0,0,0.448026887097336,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0,0,0,0,0.117588707135705,0.125666591329675,0,5.92857363371638,0,0,0,0,0,0,0,3.32094171771169,0.11981512450592,0,0,0,0,0,0,0,0.20778804455956,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.439100230582101,0.134206418760372,0,0,12.2254949704005,1.05780226665418,0,0,0.257734922644187,0,0.22237804384487,0.760902504450237,7.59246498471219,2.14108641141214,2.76468729680296,1.79060824837036,1.75467678407208,7.19055526923377,5.61958929674205,4.77939055810481,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0.592905254174298,0,0,0,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0.549122826376163,4.31304619582064,1.86070473834252,0.624075346229121,0,0,0.482443521363367,0.923765950833023,0,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0,0.827810238914197,0,0,0,0.252470927204373,0,0,0,0,0,0,0.404810701674894,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0.712994756769443,0.632073515871632,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0,0.164140899745061,7.57850175237612,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,3.51100472824754,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.17230640686684,0.476293691283074,0.115884325944855,0,0,0.294397840268795,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0.271608227691724,0,0,0,1.22769312950907,0,0,0,0.233931608445408,0.859484216193193,0.382576664137687,0.220591419119515,0.463735671240843 | ||
|short_description=p8@Agmo | |||
}} | }} |
Latest revision as of 14:19, 26 September 2015
Short description: | p8@Agmo |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Agmo_5end |
Coexpression cluster: | MCL_coexpression_mm9:217 |
Association with transcript: | 27bp_to_ENSMUST00000049874_5end |
EntrezGene: | Agmo |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.70e-12 | 9 |
epithelial cell of alimentary canal | 3.70e-12 | 9 |
intestinal crypt stem cell | 3.56e-10 | 3 |
endo-epithelial cell | 4.77e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.39e-33 | 31 |
gastrointestinal system | 8.25e-21 | 47 |
mucosa | 4.57e-19 | 15 |
intestinal mucosa | 1.39e-14 | 13 |
wall of intestine | 1.39e-14 | 13 |
gastrointestinal system mucosa | 1.39e-14 | 13 |
epithelium of mucosa | 3.70e-12 | 9 |
gastrointestinal system epithelium | 3.70e-12 | 9 |
intestinal epithelium | 3.70e-12 | 9 |
organ component layer | 3.05e-11 | 24 |
digestive system | 3.77e-11 | 116 |
digestive tract | 3.77e-11 | 116 |
primitive gut | 3.77e-11 | 116 |
endoderm-derived structure | 7.02e-11 | 118 |
endoderm | 7.02e-11 | 118 |
presumptive endoderm | 7.02e-11 | 118 |
simple columnar epithelium | 7.75e-10 | 11 |
subdivision of digestive tract | 3.22e-09 | 114 |