FFCP PHASE1:Mm9::chr2:32243280..32243298,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:32243280..32243298,-
|short_description=p1@Lcn2
|description=CAGE_peak_1_at_Lcn2_5end
|association_with_transcript=-1bp_to_ENSMUST00000136509_5end
|Entrez...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=16819 | |EntrezGene=16819 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_ENSMUST00000136509_5end | |||
|cluster_id=chr2:32243280..32243298,- | |||
|description=CAGE_peak_1_at_Lcn2_5end | |||
|id=chr2:32243280..32243298,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000466!3.27e-10!79;UBERON:0002100!3.99e-10!98;UBERON:0009569!1.03e-09!66;UBERON:0005256!1.60e-09!47;UBERON:0005172!6.44e-09!49;UBERON:0005173!6.44e-09!49;UBERON:0002417!6.44e-09!49;UBERON:0000916!6.44e-09!49;UBERON:0000926!2.96e-08!193;UBERON:0004120!2.96e-08!193;UBERON:0006603!2.96e-08!193;UBERON:0002365!3.13e-08!25;UBERON:0002330!3.13e-08!25;UBERON:0005177!7.55e-08!85;UBERON:0003104!5.07e-07!131;UBERON:0009142!5.07e-07!131;UBERON:0002204!9.24e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.35e-12,90;UBERON:0005256,5.73e-11,45;UBERON:0003104,2.54e-10,61;UBERON:0009142,2.54e-10,61;UBERON:0009569,9.33e-10,66;UBERON:0005177,3.87e-09,79;UBERON:0005172,5.89e-09,49;UBERON:0005173,5.89e-09,49;UBERON:0002417,5.89e-09,49;UBERON:0000916,5.89e-09,49;UBERON:0002365,2.89e-08,25;UBERON:0002330,2.89e-08,25;UBERON:0002204,7.51e-07,32 | |||
|phase1_expression=2.08193501236232,82.3581962028892,86.4498554840118,0.90739263392049,0.500895729946347,7.38668796412315,16.8201101228778,2.58246646883153,0.140788722151667,0.234064526321993,0,0.159544317990673,0.171200729931206,0,80.945672121206,107.311891716608,144.109746894398,25.3947043113381,23.5836825801871,29.2828859740641,1060.65991476414,0.0992909512008853,0,1.11994695955385,0.91763712426868,76.9470831914127,49.5376295582936,42.0168903737484,0.950117097281869,0.252030129759931,234.812610783968,0,0,0,4.62162591602039,3.49092755252834,1.42918549383658,120384.764138641,90366.9019415892,97386.9339014939,104248.737234808,98749.9348968974,106127.70806908,194.762377408218,148.21307344293,3.48738829107195,64.1560902365392,30.3054967368821,954.53646398128,1059.83737985392,21.2779360870551,0,0.335565212115473,0.725362142011344,2.35265659399725,83.0947978396109,98.2809698989936,961.72845209743,0,0,0.633831403506179,1.69422266034566,0,66.5925790788235,79.109309005358,80.2842529889093,391.577344447555,39.5744854481201,0.103689612308478,0,0,6.28432165688368,3.3130281142742,0,0,0,2.20231761998777,0.127687338085188,0.153606533256243,0.131886287730194,0.457438218012048,0,2.79182999001381,0,2.13917546887534,2.94628585473668,3.70166370077668,0.372798891650601,18.0228340132978,7.25486977025141,113.047150593654,30.9752595713299,3392.37698386797,14.0322829825832,48.7332313085752,18.8171292580881,546.047905472251,0,0,0,0,0,2.54805239706646,0,8.01016851741492,6.33399663687746,6.57181778519218,689.328081863965,181.515456436667,9.50029690014878,6.41895709034703,30.142082352902,69.8764956685857,33.158980921577,61.8516599533807,3.39299796590124,396.74792321367,62.7561209032417,5956.0828462785,157.399144998829,934.380464605925,996.903520446017,11.1835056730873,14.9318206475889,1.46612694769419,9.45191104271788,13.4192939446631,152.375293672326,60.2312876326327,33.4033125872755,22.8750301409313,0,15.9918374576894,1.79000820131231,0.41557608911912,2.75810147215188,262.541880006115,4672.22818823265,17475.2733001717,125.633787964225,1.95180664444056,7.58676944630461,7.02242306240862,23.0578371288644,13.2671173345089,4.99643509110914,6.1843138209421,24.8355235909455,0,0.567318240503458,0.527853372491847,1.09597866213787,2.78047249225598,14.2783388274088,6.79081050146213,5.37392520409932,53.3682022358058,154.666092175944,133.841008215324,0,3.98694301967864,0.36012412292203,0,1.96764231747404,2.77680803197281,2.32533944750408,4.82892122519315,8.17357396570186,3.12663714835613,1.47750717671186,4.2155780963845,3.07019973593198,8.12335426576887,11.6759584321523,2.94405927989778,0.92614151141356,2.31293148088659,63.2036854325871,2.13288250535234,2.32236671860439,2.44848176511977,2.62188582010345,2.89091456998331,10.2721838100782,8.54152310780121,20.4226703857773,11.0587491872119,11.5394753783867,8.57841983324129,4.49409704327111,7.99710784536369,11.1519113022446,2.46568271239006,6.62641373136427,9.01661885384643,22.1979947351393,22.1105835371093,32.8936995285594,57.4820122459499,23.7652338247159,14.7578804170892,23.0752696533767,41.2069151651137,33.5358662489349,29.4838492669804,80.5006362337776,277.512646059472,610.901745652872,1171.78816989809,1636.99102209511,1014.31797870462,722.64563951103,754.783084268611,853.319193003878,227.1634260274,125.02654458382,64.9418636949322,106.137574699941,687.836126990269,1.70542270593436,1.46668478797823,1.86719594352707,3.75504397261603,16.4156132292979,227.807764327915,225.769630571473,250.166973696525,203.747514476873,198.999551284544,421.78417207831,571.75997495798,545.760898028043,6.03165135757089,67.44430479352,10938.3127247624,3695.89678000559,4.97706828962155,8.67366480782304,0.163934945376675,118.156393931647,1.57754109708128,0.780877488593277,0,0,1.55959071857676,3.39691836946599,1.21443210502468,0.876767573733936,0,8.9969968598106,416.026389745435,54.6661403258474,39.9073050416261,2431.65961261517,19.9117707509944,12.1390318077491,8.16273603804828,9.05304382828311,60.2415861476776,23.9799415396263,44.449666424934,18.5402202033528,28.5197902707777,11.3773232856894,14.7586052004998,14.4389760547462,299.586853063333,0.540183282093931,2.32845630808958,0.857348140126369,0.709360934569094,2.31879462882692,2.46823530903181,21.6170113871366,64.3000480094566,26.4790088579775,49.1778327662565,11.5420377059036,27.9333458183917,5.97097956788743,4.05865969610664,6.89391778929257,9.61886760878507,75.4680979182774,1415.32350564861,475.721730655228,1078.01734381909,775.701305945318,305.784987411933,205.671577712664,37.0552977386605,285.78086564491,456.059913554598,7.63736494412091,1.10717597753397,14.4356821660063,16.2008011232702,22.5815359695626,17.250642535948,34.7950013672837,87.6126630688561,2.87931536182433,7.51766845092399,369.075551973634,666.848746463397,0.747582730219894,2.15096037594227,25.2786544847262,47.7891346867605,22.9780330667458,60.556335141209,83.0703975304402,3.77493639932559,16.4277202161684,201.621004380506,19.9087005995752,7.9062833963164,4.82741498674688,4.54722880422283,4.11761400035207,6.55648470778174,5.04820887983869,4.72606486958647,9.99567854486662,5.33447646584999,7.9652686258104,26.7034593226922,12.2189038883218,12.8564592399726,16.7780483875256,0.665957860122194,0.538283139656854,2.51826924546118,14.2960299583821,3920.12386474884,10989.6469109087,1655.7813600067,180.565957452731,1.12950368523413,0,0.572895513439397,1.54667864109319,0,0,0.675022500231806,0,1.81256963593682,0,0,3.99024873401031,7.17081144167364,60.0473591158686,15.5113740344707,33.4595185379026,90.0099247596542,78.2933217507798,90.1782978953001,72.7767969879737,77.3111864665231,67.3396038748292,65.7363382438574,64.6013787765131,68.7502563398691,62.8707672493657,51.8002936973504,56.1365831549382,70.0546031365621,65.5035194598068,88.4602671154372,81.1064434148172,56.5093770175151,83.2834967303242,68.4175195619454,74.9685425920254,64.9394303698343,68.661194685277,68.0378610367767,97.0776129967887,64.1815448051782,53.8819518594332,59.7477323027746,57.9463786035513,135.613347519742,15.7380664100906,170.068279339812,154.277416806678,147.674592357147,405.22643692255,377.480836390046 | |phase1_expression=2.08193501236232,82.3581962028892,86.4498554840118,0.90739263392049,0.500895729946347,7.38668796412315,16.8201101228778,2.58246646883153,0.140788722151667,0.234064526321993,0,0.159544317990673,0.171200729931206,0,80.945672121206,107.311891716608,144.109746894398,25.3947043113381,23.5836825801871,29.2828859740641,1060.65991476414,0.0992909512008853,0,1.11994695955385,0.91763712426868,76.9470831914127,49.5376295582936,42.0168903737484,0.950117097281869,0.252030129759931,234.812610783968,0,0,0,4.62162591602039,3.49092755252834,1.42918549383658,120384.764138641,90366.9019415892,97386.9339014939,104248.737234808,98749.9348968974,106127.70806908,194.762377408218,148.21307344293,3.48738829107195,64.1560902365392,30.3054967368821,954.53646398128,1059.83737985392,21.2779360870551,0,0.335565212115473,0.725362142011344,2.35265659399725,83.0947978396109,98.2809698989936,961.72845209743,0,0,0.633831403506179,1.69422266034566,0,66.5925790788235,79.109309005358,80.2842529889093,391.577344447555,39.5744854481201,0.103689612308478,0,0,6.28432165688368,3.3130281142742,0,0,0,2.20231761998777,0.127687338085188,0.153606533256243,0.131886287730194,0.457438218012048,0,2.79182999001381,0,2.13917546887534,2.94628585473668,3.70166370077668,0.372798891650601,18.0228340132978,7.25486977025141,113.047150593654,30.9752595713299,3392.37698386797,14.0322829825832,48.7332313085752,18.8171292580881,546.047905472251,0,0,0,0,0,2.54805239706646,0,8.01016851741492,6.33399663687746,6.57181778519218,689.328081863965,181.515456436667,9.50029690014878,6.41895709034703,30.142082352902,69.8764956685857,33.158980921577,61.8516599533807,3.39299796590124,396.74792321367,62.7561209032417,5956.0828462785,157.399144998829,934.380464605925,996.903520446017,11.1835056730873,14.9318206475889,1.46612694769419,9.45191104271788,13.4192939446631,152.375293672326,60.2312876326327,33.4033125872755,22.8750301409313,0,15.9918374576894,1.79000820131231,0.41557608911912,2.75810147215188,262.541880006115,4672.22818823265,17475.2733001717,125.633787964225,1.95180664444056,7.58676944630461,7.02242306240862,23.0578371288644,13.2671173345089,4.99643509110914,6.1843138209421,24.8355235909455,0,0.567318240503458,0.527853372491847,1.09597866213787,2.78047249225598,14.2783388274088,6.79081050146213,5.37392520409932,53.3682022358058,154.666092175944,133.841008215324,0,3.98694301967864,0.36012412292203,0,1.96764231747404,2.77680803197281,2.32533944750408,4.82892122519315,8.17357396570186,3.12663714835613,1.47750717671186,4.2155780963845,3.07019973593198,8.12335426576887,11.6759584321523,2.94405927989778,0.92614151141356,2.31293148088659,63.2036854325871,2.13288250535234,2.32236671860439,2.44848176511977,2.62188582010345,2.89091456998331,10.2721838100782,8.54152310780121,20.4226703857773,11.0587491872119,11.5394753783867,8.57841983324129,4.49409704327111,7.99710784536369,11.1519113022446,2.46568271239006,6.62641373136427,9.01661885384643,22.1979947351393,22.1105835371093,32.8936995285594,57.4820122459499,23.7652338247159,14.7578804170892,23.0752696533767,41.2069151651137,33.5358662489349,29.4838492669804,80.5006362337776,277.512646059472,610.901745652872,1171.78816989809,1636.99102209511,1014.31797870462,722.64563951103,754.783084268611,853.319193003878,227.1634260274,125.02654458382,64.9418636949322,106.137574699941,687.836126990269,1.70542270593436,1.46668478797823,1.86719594352707,3.75504397261603,16.4156132292979,227.807764327915,225.769630571473,250.166973696525,203.747514476873,198.999551284544,421.78417207831,571.75997495798,545.760898028043,6.03165135757089,67.44430479352,10938.3127247624,3695.89678000559,4.97706828962155,8.67366480782304,0.163934945376675,118.156393931647,1.57754109708128,0.780877488593277,0,0,1.55959071857676,3.39691836946599,1.21443210502468,0.876767573733936,0,8.9969968598106,416.026389745435,54.6661403258474,39.9073050416261,2431.65961261517,19.9117707509944,12.1390318077491,8.16273603804828,9.05304382828311,60.2415861476776,23.9799415396263,44.449666424934,18.5402202033528,28.5197902707777,11.3773232856894,14.7586052004998,14.4389760547462,299.586853063333,0.540183282093931,2.32845630808958,0.857348140126369,0.709360934569094,2.31879462882692,2.46823530903181,21.6170113871366,64.3000480094566,26.4790088579775,49.1778327662565,11.5420377059036,27.9333458183917,5.97097956788743,4.05865969610664,6.89391778929257,9.61886760878507,75.4680979182774,1415.32350564861,475.721730655228,1078.01734381909,775.701305945318,305.784987411933,205.671577712664,37.0552977386605,285.78086564491,456.059913554598,7.63736494412091,1.10717597753397,14.4356821660063,16.2008011232702,22.5815359695626,17.250642535948,34.7950013672837,87.6126630688561,2.87931536182433,7.51766845092399,369.075551973634,666.848746463397,0.747582730219894,2.15096037594227,25.2786544847262,47.7891346867605,22.9780330667458,60.556335141209,83.0703975304402,3.77493639932559,16.4277202161684,201.621004380506,19.9087005995752,7.9062833963164,4.82741498674688,4.54722880422283,4.11761400035207,6.55648470778174,5.04820887983869,4.72606486958647,9.99567854486662,5.33447646584999,7.9652686258104,26.7034593226922,12.2189038883218,12.8564592399726,16.7780483875256,0.665957860122194,0.538283139656854,2.51826924546118,14.2960299583821,3920.12386474884,10989.6469109087,1655.7813600067,180.565957452731,1.12950368523413,0,0.572895513439397,1.54667864109319,0,0,0.675022500231806,0,1.81256963593682,0,0,3.99024873401031,7.17081144167364,60.0473591158686,15.5113740344707,33.4595185379026,90.0099247596542,78.2933217507798,90.1782978953001,72.7767969879737,77.3111864665231,67.3396038748292,65.7363382438574,64.6013787765131,68.7502563398691,62.8707672493657,51.8002936973504,56.1365831549382,70.0546031365621,65.5035194598068,88.4602671154372,81.1064434148172,56.5093770175151,83.2834967303242,68.4175195619454,74.9685425920254,64.9394303698343,68.661194685277,68.0378610367767,97.0776129967887,64.1815448051782,53.8819518594332,59.7477323027746,57.9463786035513,135.613347519742,15.7380664100906,170.068279339812,154.277416806678,147.674592357147,405.22643692255,377.480836390046 | ||
|short_description=p1@Lcn2 | |||
}} | }} |
Latest revision as of 14:21, 26 September 2015
Short description: | p1@Lcn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lcn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | -1bp_to_ENSMUST00000136509_5end |
EntrezGene: | Lcn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk | 1.35e-12 | 90 |
trunk mesenchyme | 5.73e-11 | 45 |
mesenchyme | 2.54e-10 | 61 |
entire embryonic mesenchyme | 2.54e-10 | 61 |
subdivision of trunk | 9.33e-10 | 66 |
trunk region element | 3.87e-09 | 79 |
abdomen element | 5.89e-09 | 49 |
abdominal segment element | 5.89e-09 | 49 |
abdominal segment of trunk | 5.89e-09 | 49 |
abdomen | 5.89e-09 | 49 |
exocrine gland | 2.89e-08 | 25 |
exocrine system | 2.89e-08 | 25 |
musculoskeletal system | 7.51e-07 | 32 |