FFCP PHASE1:Mm9::chr2:32631361..32631371,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=329384 | |EntrezGene=329384 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-13bp_to_ENSMUST00000138214_5end | |association_with_transcript=-13bp_to_ENSMUST00000138214_5end | ||
|cluster_id=chr2:32631361..32631371,+ | |||
|description=CAGE_peak_3_at_Ptrh1_5end | |description=CAGE_peak_3_at_Ptrh1_5end | ||
|id=chr2:32631361..32631371,+ | |id=chr2:32631361..32631371,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.51e-13!25;CL:0002076!3.65e-12!15;CL:0000223!8.97e-11!20;CL:0002563!1.08e-09!9;CL:0002251!1.08e-09!9;CL:0002321!2.21e-07!70;CL:0000220!2.21e-07!70;CL:0000239!3.03e-07!6;CL:0000677!3.03e-07!6;CL:0000212!3.03e-07!6;CL:0000584!3.03e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.31e-31,25;CL:0002076,1.94e-28,15;CL:0002563,6.00e-26,9;CL:0002251,6.00e-26,9;CL:0000223,6.51e-25,20;CL:0000239,6.34e-23,6;CL:0000677,6.34e-23,6;CL:0000584,6.34e-23,6;CL:0000075,1.40e-19,7;CL:0000682,8.08e-13,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.00e-14!15;UBERON:0001242!9.85e-13!13;UBERON:0000060!9.85e-13!13;UBERON:0001262!9.85e-13!13;UBERON:0004786!9.85e-13!13;UBERON:0003350!1.08e-09!9;UBERON:0004808!1.08e-09!9;UBERON:0001277!1.08e-09!9;UBERON:0004923!5.58e-09!24;UBERON:0000485!1.37e-08!11;UBERON:0000064!3.04e-08!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.80e-29,15;UBERON:0003350,6.00e-26,9;UBERON:0004808,6.00e-26,9;UBERON:0001277,6.00e-26,9;UBERON:0001242,2.12e-22,13;UBERON:0001262,2.12e-22,13;UBERON:0004786,2.12e-22,13;UBERON:0000485,4.91e-21,11;UBERON:0004923,1.68e-17,24;UBERON:0000160,1.58e-10,31;UBERON:0001962,5.73e-09,2;UBERON:0001961,5.73e-09,2;UBERON:0001744,5.73e-09,2;UBERON:0001007,3.56e-07,116;UBERON:0001555,3.56e-07,116;UBERON:0007026,3.56e-07,116;UBERON:0004119,5.38e-07,118;UBERON:0000925,5.38e-07,118;UBERON:0006595,5.38e-07,118 | |||
|phase1_expression=0.160148847104794,70.8420077507903,52.3249125297966,3.32710632437513,3.00537437967808,5.37213670118047,2.56973904655078,0.129123323441576,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9994317095055,16.0586496747019,39.0477735598214,13.7843838770904,17.0222273821852,0.380046838912748,0.504060259519861,11.0865255327652,0,0,0,1.1554064790051,0.664938581433969,2.6542016314108,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0.218025156380447,0.878744730937887,0.194429899074283,0.139986421625363,0,0,0,0.336093799142464,0.771778308107841,0.286533439938757,0.515672092277442,0,0,0,0.338844532069132,0,2.2497492932035,0,1.4209602298922,0,0.384218305321555,0,0,0,0.285650984403804,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93776205332557,0.453429360640713,0.579728977403356,0,2.719885334831,0,0,0,0,0.170430322578058,0.259786004602869,0,0,0,2.54805239706646,7.11066703153331,0.432982082022428,0.253359865475099,1.51657333504435,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0.278047249225598,0,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0.432276099749388,1.1948476395262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0.163934945376675,0,0.315508219416257,0,0,0.238968797952552,0.222798674082394,0.283076530788832,0,0,0.395287777946524,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0.178368817602071,0,0,0.23467170806371,0.21183207086382,0,0.16488625294148,0.807322133479528,0.241251699712623,0.358117032009409,0.328281799490123,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0.436725127492355,0.134864346384821,0.0826534557253359,0.785267825952089,0.388844919875379,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0.288030006257865,0.632022241256357,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0.590758108698309,0.201932899896295,0.381034033274999,0.201652370273681,0.194915761479505,0.192423683280659,0.116876902181569,2.49403421976732,0.443971906748129,0.269141569828427,0.335769232728157,0,0,0,1.07184189539533,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0.187283014939765,0,0.114870937911227,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.365855945745545,0,0.135804113845862,0,0.118635018124174,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0.231867835620421 | |phase1_expression=0.160148847104794,70.8420077507903,52.3249125297966,3.32710632437513,3.00537437967808,5.37213670118047,2.56973904655078,0.129123323441576,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9994317095055,16.0586496747019,39.0477735598214,13.7843838770904,17.0222273821852,0.380046838912748,0.504060259519861,11.0865255327652,0,0,0,1.1554064790051,0.664938581433969,2.6542016314108,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0.218025156380447,0.878744730937887,0.194429899074283,0.139986421625363,0,0,0,0.336093799142464,0.771778308107841,0.286533439938757,0.515672092277442,0,0,0,0.338844532069132,0,2.2497492932035,0,1.4209602298922,0,0.384218305321555,0,0,0,0.285650984403804,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93776205332557,0.453429360640713,0.579728977403356,0,2.719885334831,0,0,0,0,0.170430322578058,0.259786004602869,0,0,0,2.54805239706646,7.11066703153331,0.432982082022428,0.253359865475099,1.51657333504435,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0.278047249225598,0,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0.432276099749388,1.1948476395262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0.163934945376675,0,0.315508219416257,0,0,0.238968797952552,0.222798674082394,0.283076530788832,0,0,0.395287777946524,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0.178368817602071,0,0,0.23467170806371,0.21183207086382,0,0.16488625294148,0.807322133479528,0.241251699712623,0.358117032009409,0.328281799490123,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0.436725127492355,0.134864346384821,0.0826534557253359,0.785267825952089,0.388844919875379,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0.288030006257865,0.632022241256357,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0.590758108698309,0.201932899896295,0.381034033274999,0.201652370273681,0.194915761479505,0.192423683280659,0.116876902181569,2.49403421976732,0.443971906748129,0.269141569828427,0.335769232728157,0,0,0,1.07184189539533,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0.187283014939765,0,0.114870937911227,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.365855945745545,0,0.135804113845862,0,0.118635018124174,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0.231867835620421 | ||
|short_description=p3@Ptrh1 | |short_description=p3@Ptrh1 | ||
}} | }} |
Latest revision as of 14:46, 26 September 2015
Short description: | p3@Ptrh1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ptrh1_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | -13bp_to_ENSMUST00000138214_5end |
EntrezGene: | Ptrh1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.31e-31 | 25 |
endo-epithelial cell | 1.94e-28 | 15 |
intestinal epithelial cell | 6.00e-26 | 9 |
epithelial cell of alimentary canal | 6.00e-26 | 9 |
endodermal cell | 6.51e-25 | 20 |
brush border epithelial cell | 6.34e-23 | 6 |
gut absorptive cell | 6.34e-23 | 6 |
enterocyte | 6.34e-23 | 6 |
columnar/cuboidal epithelial cell | 1.40e-19 | 7 |
M cell of gut | 8.08e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.80e-29 | 15 |
epithelium of mucosa | 6.00e-26 | 9 |
gastrointestinal system epithelium | 6.00e-26 | 9 |
intestinal epithelium | 6.00e-26 | 9 |
intestinal mucosa | 2.12e-22 | 13 |
wall of intestine | 2.12e-22 | 13 |
gastrointestinal system mucosa | 2.12e-22 | 13 |
simple columnar epithelium | 4.91e-21 | 11 |
organ component layer | 1.68e-17 | 24 |
intestine | 1.58e-10 | 31 |
gut-associated lymphoid tissue | 5.73e-09 | 2 |
mucosa-associated lymphoid tissue | 5.73e-09 | 2 |
lymphoid tissue | 5.73e-09 | 2 |
digestive system | 3.56e-07 | 116 |
digestive tract | 3.56e-07 | 116 |
primitive gut | 3.56e-07 | 116 |
endoderm-derived structure | 5.38e-07 | 118 |
endoderm | 5.38e-07 | 118 |
presumptive endoderm | 5.38e-07 | 118 |