FFCP PHASE1:Mm9::chr7:31845082..31845100,+: Difference between revisions
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|id=chr7:31845082..31845100,+
|short_description=p10@Lgi4
|description=CAGE_peak_10_at_Lgi4_5end
|association_with_transcript=-485bp_to_ENSMUST00000169785_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=243914 | |EntrezGene=243914 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=107 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-485bp_to_ENSMUST00000169785_5end | |||
|cluster_id=chr7:31845082..31845100,+ | |||
|description=CAGE_peak_10_at_Lgi4_5end | |||
|id=chr7:31845082..31845100,+ | |||
|ontology_enrichment_celltype=CL:0000107!3.42e-13!9;CL:0000221!8.03e-13!44;CL:0000133!8.03e-13!44;CL:0002319!6.38e-12!43;CL:0000540!1.94e-10!33;CL:0000047!1.94e-10!33;CL:0000031!1.94e-10!33;CL:0000404!1.94e-10!33;CL:0000055!3.28e-09!50;CL:0000393!6.18e-08!39;CL:0000211!6.18e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,2.06e-50,9;CL:0000221,6.73e-17,44;CL:0000133,6.73e-17,44;CL:0000540,5.62e-16,33;CL:0000047,5.62e-16,33;CL:0000031,5.62e-16,33;CL:0000404,5.62e-16,33;CL:0002319,1.52e-14,43;CL:0000393,2.53e-13,39;CL:0000211,2.53e-13,39;CL:0002321,5.03e-10,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!6.55e-21!102;UBERON:0000924!6.55e-21!102;UBERON:0006601!6.55e-21!102;UBERON:0000073!2.19e-20!75;UBERON:0001016!2.19e-20!75;UBERON:0001017!1.76e-18!73;UBERON:0005743!1.76e-18!73;UBERON:0000010!1.64e-15!11;UBERON:0002410!3.42e-13!9;UBERON:0002346!8.44e-11!71;UBERON:0003075!8.44e-11!71;UBERON:0007284!8.44e-11!71;UBERON:0000033!4.32e-08!63;UBERON:0002298!1.42e-07!6;UBERON:0001049!2.28e-07!52;UBERON:0005068!2.28e-07!52;UBERON:0006241!2.28e-07!52;UBERON:0007135!2.28e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.49e-50,11;UBERON:0002410,2.06e-50,9;UBERON:0000011,5.55e-18,3;UBERON:0010313,8.20e-18,3;UBERON:0002342,8.20e-18,3;UBERON:0002005,8.20e-18,3;UBERON:0005428,8.20e-18,3;UBERON:0005062,8.20e-18,3;UBERON:0000013,1.06e-17,3;UBERON:0001016,6.03e-15,75;UBERON:0001017,3.05e-13,73;UBERON:0004121,3.66e-13,95;UBERON:0000924,3.66e-13,95;UBERON:0006601,3.66e-13,95 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0,0.571301968807607,0.220868540951614,0,0,0,0,0.766124028511126,1.0752457327937,0,0,0,0.558365998002762,0.56276261003168,0.61119299110724,0.294628585473668,0.284743361598206,0,0.681535739998656,2.49386148352392,0,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0,0.258937883647172,0,0,0.608930956624282,0.461230994512117,0.150722640552623,0.23517741427141,0,0,0.144599356919912,0,0,0,0,0,0.292780797011547,2.30391377494801,0,0,0,0,1.49790639404823,0.457500602818626,0,1.04294592115366,0,1.24672826735736,0,0,0,0.252722758433675,0,0,0,0,0,0.0680364991513279,0.2562274405697,0.281105173679186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0.268412837520744,0.841159794256509,0,0,0,0,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.642202359951168,0.35163505977661,0,0,5.36363973007636,1.56175497718655,4.95473814785438,4.06246956519338,4.23317480756549,7.35998980050964,4.45291771842384,4.09158201075837,3.16230222357219,0.642642632843614,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0.363533729477506,0,0.632073515871632,0,0,0,0,0,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0.120625849856312,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0.2604087696879,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.386379188064381,0,0,0,0,0,0,0.572895513439397,0.171853182343688,0.685082519770642,0.755393897389701,0,0,0.453142408984205,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0.50695859978048,0,0.0936415074698824,0,0,0,0,0,0,0,0,0.532427418478012,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0,0.571301968807607,0.220868540951614,0,0,0,0,0.766124028511126,1.0752457327937,0,0,0,0.558365998002762,0.56276261003168,0.61119299110724,0.294628585473668,0.284743361598206,0,0.681535739998656,2.49386148352392,0,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0,0.258937883647172,0,0,0.608930956624282,0.461230994512117,0.150722640552623,0.23517741427141,0,0,0.144599356919912,0,0,0,0,0,0.292780797011547,2.30391377494801,0,0,0,0,1.49790639404823,0.457500602818626,0,1.04294592115366,0,1.24672826735736,0,0,0,0.252722758433675,0,0,0,0,0,0.0680364991513279,0.2562274405697,0.281105173679186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0.268412837520744,0.841159794256509,0,0,0,0,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.642202359951168,0.35163505977661,0,0,5.36363973007636,1.56175497718655,4.95473814785438,4.06246956519338,4.23317480756549,7.35998980050964,4.45291771842384,4.09158201075837,3.16230222357219,0.642642632843614,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0.363533729477506,0,0.632073515871632,0,0,0,0,0,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0.120625849856312,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0.2604087696879,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.386379188064381,0,0,0,0,0,0,0.572895513439397,0.171853182343688,0.685082519770642,0.755393897389701,0,0,0.453142408984205,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0.50695859978048,0,0.0936415074698824,0,0,0,0,0,0,0,0,0.532427418478012,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p10@Lgi4 | |||
}} | }} |
Latest revision as of 15:41, 26 September 2015
Short description: | p10@Lgi4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Lgi4_5end |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | -485bp_to_ENSMUST00000169785_5end |
EntrezGene: | Lgi4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 2.06e-50 | 9 |
ectodermal cell | 6.73e-17 | 44 |
neurectodermal cell | 6.73e-17 | 44 |
neuron | 5.62e-16 | 33 |
neuronal stem cell | 5.62e-16 | 33 |
neuroblast | 5.62e-16 | 33 |
electrically signaling cell | 5.62e-16 | 33 |
neural cell | 1.52e-14 | 43 |
electrically responsive cell | 2.53e-13 | 39 |
electrically active cell | 2.53e-13 | 39 |
embryonic cell | 5.03e-10 | 70 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 1.49e-50 | 11 |
autonomic nervous system | 2.06e-50 | 9 |
parasympathetic nervous system | 5.55e-18 | 3 |
neural crest-derived structure | 8.20e-18 | 3 |
neural crest | 8.20e-18 | 3 |
enteric nervous system | 8.20e-18 | 3 |
vagal neural crest | 8.20e-18 | 3 |
neural fold | 8.20e-18 | 3 |
sympathetic nervous system | 1.06e-17 | 3 |
nervous system | 6.03e-15 | 75 |
central nervous system | 3.05e-13 | 73 |
ectoderm-derived structure | 3.66e-13 | 95 |
ectoderm | 3.66e-13 | 95 |
presumptive ectoderm | 3.66e-13 | 95 |