FFCP PHASE1:Mm9::chr7:38968204..38968218,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72244 | |EntrezGene=72244 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=Q8WUR0 | |UniProt=Q8WUR0 | ||
|association_with_transcript=-17bp_to_ENSMUST00000165308,NM_001085385,uc009gks.1_5end | |association_with_transcript=-17bp_to_ENSMUST00000165308,NM_001085385,uc009gks.1_5end | ||
|cluster_id=chr7:38968204..38968218,+ | |||
|description=CAGE_peak_5_at_1600014C10Rik_5end | |description=CAGE_peak_5_at_1600014C10Rik_5end | ||
|id=chr7:38968204..38968218,+ | |id=chr7:38968204..38968218,+ | ||
|ontology_enrichment_celltype=CL:0000239!2.83e-20!6;CL:0000677!2.83e-20!6;CL:0000212!2.83e-20!6;CL:0000584!2.83e-20!6;CL:0000075!2.72e-17!7;CL:0000066!1.06e-14!25;CL:0002563!2.61e-13!9;CL:0002251!2.61e-13!9;CL:0000473!2.63e-11!3;CL:0000627!2.63e-11!3;CL:0000682!2.63e-11!3;CL:0000223!9.11e-10!20;CL:0002076!1.01e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.74e-31,6;CL:0000677,2.74e-31,6;CL:0000584,2.74e-31,6;CL:0000075,8.76e-27,7;CL:0000066,3.80e-24,25;CL:0002563,9.07e-21,9;CL:0002251,9.07e-21,9;CL:0000682,5.10e-17,3;CL:0000223,6.91e-16,20;CL:0002076,2.55e-12,15;CL:0000473,1.39e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.85e-25!15;UBERON:0001242!1.06e-19!13;UBERON:0000060!1.06e-19!13;UBERON:0001262!1.06e-19!13;UBERON:0004786!1.06e-19!13;UBERON:0004923!4.08e-15!24;UBERON:0003350!2.61e-13!9;UBERON:0004808!2.61e-13!9;UBERON:0001277!2.61e-13!9;UBERON:0000485!8.99e-11!11;UBERON:0000331!2.02e-10!3;UBERON:0002116!2.02e-10!3;UBERON:0001204!2.02e-10!3;UBERON:0001168!2.02e-10!3;UBERON:0001962!7.37e-08!2;UBERON:0001961!7.37e-08!2;UBERON:0001744!7.37e-08!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.59e-27,15;UBERON:0003350,9.07e-21,9;UBERON:0004808,9.07e-21,9;UBERON:0001277,9.07e-21,9;UBERON:0001242,2.16e-19,13;UBERON:0001262,2.16e-19,13;UBERON:0004786,2.16e-19,13;UBERON:0000485,6.21e-17,11;UBERON:0004923,8.35e-17,24;UBERON:0001962,1.48e-11,2;UBERON:0001961,1.48e-11,2;UBERON:0001744,1.48e-11,2;UBERON:0002465,5.43e-08,3;UBERON:0000160,9.63e-08,31 | |||
|phase1_expression=0,22.6834014965585,17.2899710968024,4.83942738090928,3.00537437967808,16.1164101035414,25.2301651843168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1191892388945,14.9116032693661,11.4846392823004,26.2764817657036,24.3482492935055,0.760093677825496,0.756090389279792,23.9468951507729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.47968467078526,6.47643829965381,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,3.9964357901671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0.274561413188081,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0,22.6834014965585,17.2899710968024,4.83942738090928,3.00537437967808,16.1164101035414,25.2301651843168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1191892388945,14.9116032693661,11.4846392823004,26.2764817657036,24.3482492935055,0.760093677825496,0.756090389279792,23.9468951507729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.47968467078526,6.47643829965381,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,3.9964357901671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0.274561413188081,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p5@1600014C10Rik | |short_description=p5@1600014C10Rik | ||
}} | }} |
Latest revision as of 17:16, 26 September 2015
Short description: | p5@1600014C10Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_1600014C10Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | -17bp_to_ENSMUST00000165308, NM_001085385, uc009gks.1_5end |
EntrezGene: | 1600014C10Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.74e-31 | 6 |
gut absorptive cell | 2.74e-31 | 6 |
enterocyte | 2.74e-31 | 6 |
columnar/cuboidal epithelial cell | 8.76e-27 | 7 |
epithelial cell | 3.80e-24 | 25 |
intestinal epithelial cell | 9.07e-21 | 9 |
epithelial cell of alimentary canal | 9.07e-21 | 9 |
M cell of gut | 5.10e-17 | 3 |
endodermal cell | 6.91e-16 | 20 |
endo-epithelial cell | 2.55e-12 | 15 |
defensive cell | 1.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.59e-27 | 15 |
epithelium of mucosa | 9.07e-21 | 9 |
gastrointestinal system epithelium | 9.07e-21 | 9 |
intestinal epithelium | 9.07e-21 | 9 |
intestinal mucosa | 2.16e-19 | 13 |
wall of intestine | 2.16e-19 | 13 |
gastrointestinal system mucosa | 2.16e-19 | 13 |
simple columnar epithelium | 6.21e-17 | 11 |
organ component layer | 8.35e-17 | 24 |
gut-associated lymphoid tissue | 1.48e-11 | 2 |
mucosa-associated lymphoid tissue | 1.48e-11 | 2 |
lymphoid tissue | 1.48e-11 | 2 |
lymphoid system | 5.43e-08 | 3 |
intestine | 9.63e-08 | 31 |